Class: Ucsc::Hg18::DBConnection

Inherits:

ActiveRecord::Base

• Object
• ActiveRecord::Base
• Ucsc::Hg18::DBConnection

Defined in:

lib/ucsc/db_connection.rb

Overview

DESCRIPTION

The Ucsc::Hg18::DBConnection is the actual connection established with the UCSC mysql server.

Direct Known Subclasses

CnpIafrate, CnpLocke, CnpRedon, CnpSebat, CnpSharp, CnpTuzun, Dgv, ExaptedRepeat, GenomicSuperDup, InterruptedRepeat, Microsatellite, SimpleRepeat

Class Method Summary

• .connect ⇒ Object

  DESCRIPTION The Ucsc::Hg18::DBConnection#connect method makes the connection to the UCSC hg18 database.

Class Method Details

.connect ⇒ Object

DESCRIPTION

The Ucsc::Hg18::DBConnection#connect method makes the connection to the UCSC hg18 database.

USAGE

# Connect to the hg18
Ensembl::Core::DBConnection.connect

---

Arguments: none

# File 'lib/ucsc/db_connection.rb', line 27

def self.connect
establish_connection(
                    :adapter => DB_ADAPTER,
                    :host => DB_HOST,
                    :database => 'hg18',
                    :username => DB_USERNAME,
                    :password => DB_PASSWORD
                    )
end