Class: FHIR::MolecularSequence::Quality

Inherits:
FHIR::Model show all
Includes:
Hashable, Json, Xml
Defined in:
lib/fhir_models/fhir/resources/MolecularSequence.rb

Defined Under Namespace

Classes: Roc

Constant Summary collapse

METADATA = 
{
  'id' => {'type'=>'string', 'path'=>'Quality.id', 'min'=>0, 'max'=>1},
  'extension' => {'type'=>'Extension', 'path'=>'Quality.extension', 'min'=>0, 'max'=>Float::INFINITY},
  'modifierExtension' => {'type'=>'Extension', 'path'=>'Quality.modifierExtension', 'min'=>0, 'max'=>Float::INFINITY},
  'type' => {'valid_codes'=>{'http://hl7.org/fhir/quality-type'=>['indel', 'snp', 'unknown']}, 'type'=>'code', 'path'=>'Quality.type', 'min'=>1, 'max'=>1, 'binding'=>{'strength'=>'required', 'uri'=>'http://hl7.org/fhir/ValueSet/quality-type|4.0.0'}},
  'standardSequence' => {'type'=>'CodeableConcept', 'path'=>'Quality.standardSequence', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'example', 'uri'=>'http://hl7.org/fhir/ValueSet/sequence-quality-standardSequence'}},
  'start' => {'type'=>'integer', 'path'=>'Quality.start', 'min'=>0, 'max'=>1},
  'end' => {'type'=>'integer', 'path'=>'Quality.end', 'min'=>0, 'max'=>1},
  'score' => {'type'=>'Quantity', 'path'=>'Quality.score', 'min'=>0, 'max'=>1},
  'method' => {'local_name'=>'local_method', 'type'=>'CodeableConcept', 'path'=>'Quality.method', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'example', 'uri'=>'http://hl7.org/fhir/ValueSet/sequence-quality-method'}},
  'truthTP' => {'type'=>'decimal', 'path'=>'Quality.truthTP', 'min'=>0, 'max'=>1},
  'queryTP' => {'type'=>'decimal', 'path'=>'Quality.queryTP', 'min'=>0, 'max'=>1},
  'truthFN' => {'type'=>'decimal', 'path'=>'Quality.truthFN', 'min'=>0, 'max'=>1},
  'queryFP' => {'type'=>'decimal', 'path'=>'Quality.queryFP', 'min'=>0, 'max'=>1},
  'gtFP' => {'type'=>'decimal', 'path'=>'Quality.gtFP', 'min'=>0, 'max'=>1},
  'precision' => {'type'=>'decimal', 'path'=>'Quality.precision', 'min'=>0, 'max'=>1},
  'recall' => {'type'=>'decimal', 'path'=>'Quality.recall', 'min'=>0, 'max'=>1},
  'fScore' => {'type'=>'decimal', 'path'=>'Quality.fScore', 'min'=>0, 'max'=>1},
  'roc' => {'type'=>'MolecularSequence::Quality::Roc', 'path'=>'Quality.roc', 'min'=>0, 'max'=>1}
}

Instance Attribute Summary collapse

Method Summary

Methods included from Xml

from_xml, #to_xml, valid?, validate

Methods included from Deprecate

#deprecate

Methods included from Json

from_json, #to_json

Methods included from Hashable

#from_hash, #to_hash

Methods inherited from FHIR::Model

#==, #attribute_mismatch, #compare_attribute, #equals?, #hash, #initialize, #method_missing, #mismatch, #primitive?, #to_reference, #valid?, #validate, #validate_profile

Constructor Details

This class inherits a constructor from FHIR::Model

Dynamic Method Handling

This class handles dynamic methods through the method_missing method in the class FHIR::Model

Instance Attribute Details

#end ⇒ Object

0-1 integer



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 159

def end
  @end
end

#extension ⇒ Object

0-* [ Extension ]



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 154

def extension
  @extension
end

#fScore ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 169

def fScore
  @fScore
end

#gtFP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 166

def gtFP
  @gtFP
end

#id ⇒ Object

0-1 string



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 153

def id
  @id
end

#local_method ⇒ Object

0-1 CodeableConcept



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 161

def local_method
  @local_method
end

#modifierExtension ⇒ Object

0-* [ Extension ]



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 155

def modifierExtension
  @modifierExtension
end

#precision ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 167

def precision
  @precision
end

#queryFP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 165

def queryFP
  @queryFP
end

#queryTP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 163

def queryTP
  @queryTP
end

#recall ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 168

def recall
  @recall
end

#roc ⇒ Object

0-1 MolecularSequence::Quality::Roc



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 170

def roc
  @roc
end

#score ⇒ Object

0-1 Quantity



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 160

def score
  @score
end

#standardSequence ⇒ Object

0-1 CodeableConcept



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 157

def standardSequence
  @standardSequence
end

#start ⇒ Object

0-1 integer



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 158

def start
  @start
end

#truthFN ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 164

def truthFN
  @truthFN
end

#truthTP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 162

def truthTP
  @truthTP
end

#type ⇒ Object

1-1 code



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# File 'lib/fhir_models/fhir/resources/MolecularSequence.rb', line 156

def type
  @type
end