Class: Chem::KEGG::KEGGReaction

Inherits:
Object
  • Object
show all
Includes:
Reaction
Defined in:
lib/chem/db/kegg.rb

Overview

Duplication definition!

Instance Attribute Summary collapse

Instance Method Summary collapse

Methods included from Reaction

#to_mdl_rxn

Constructor Details

#initialize ⇒ KEGGReaction

Returns a new instance of KEGGReaction.



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# File 'lib/chem/db/kegg.rb', line 181

def initialize
  @ecs = []
  @compounds = []
end

Instance Attribute Details

#compounds ⇒ Object

Returns the value of attribute compounds.



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# File 'lib/chem/db/kegg.rb', line 180

def compounds
  @compounds
end

#direction ⇒ Object

Returns the value of attribute direction.



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# File 'lib/chem/db/kegg.rb', line 180

def direction
  @direction
end

#ecs ⇒ Object

Returns the value of attribute ecs.



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# File 'lib/chem/db/kegg.rb', line 180

def ecs
  @ecs
end

#entry ⇒ Object

Returns the value of attribute entry.



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# File 'lib/chem/db/kegg.rb', line 180

def entry
  @entry
end

#name ⇒ Object

Returns the value of attribute name.



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# File 'lib/chem/db/kegg.rb', line 180

def name
  @name
end

Instance Method Details

#kegg=(kegg) ⇒ Object 



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# File 'lib/chem/db/kegg.rb', line 186

def kegg= kegg
  @kegg = kegg
end

#map_formula ⇒ Object 



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# File 'lib/chem/db/kegg.rb', line 190

def map_formula
  return nil unless @kegg.map_formula[@entry]
  @kegg.map_formula[@entry].compounds
end