Class: Bio::GFF::GFF3::FastParserFileRecord

Inherits:

Bio::GFFbrowser::FastLineRecord

• Object
• Bio::GFFbrowser::Record
• Bio::GFFbrowser::FastLineRecord
• Bio::GFF::GFF3::FastParserFileRecord

Includes:

Bio::GFFbrowser::FastLineParser

Defined in:

lib/bio/db/gff/file/gfffileiterator.rb

Instance Attribute Summary

• #io_seek ⇒ Object

  Returns the value of attribute io_seek.

Instance Method Summary

• #initialize(io_seek, buf) ⇒ FastParserFileRecord constructor

  A new instance of FastParserFileRecord.

Methods included from Bio::GFFbrowser::FastLineParser

#parse_attributes_fast, #parse_line_fast

Methods included from Bio::GFFbrowser::Helpers::Logger

#debug, #error, #info, #log_sys_info, #warn

Methods inherited from Bio::GFFbrowser::FastLineRecord

#attributes, #comment, #end, #feature, #get_attribute, #id, #phase, #score, #seqid, #source, #start, #strand

Constructor Details

#initialize(io_seek, buf) ⇒ FastParserFileRecord

Returns a new instance of FastParserFileRecord.

# File 'lib/bio/db/gff/file/gfffileiterator.rb', line 28

def initialize io_seek, buf
  @io_seek = io_seek
  super(parse_line_fast(buf))
end

Instance Attribute Details

#io_seek ⇒ Object

Returns the value of attribute io_seek.

# File 'lib/bio/db/gff/file/gfffileiterator.rb', line 25

def io_seek
  @io_seek
end