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#< TraceVisualization::Data::Lexeme
#<< TraceVisualization::Mapping
#<=> TraceVisualization::Data::Lexeme
#[] TraceVisualization::Mapping
assert_instance_of TraceVisualization
#build_positions TraceVisualization::Data::Repetition
#build_positions_for_repeat TraceVisualization::Data::Repetition
bwt TraceVisualization::BurrowsWheelerTransform
char_counter_inc TraceVisualization::Repetitions
concat_condition TraceVisualization::RepetitionsConcatenation
create_repetition TraceVisualization::RepetitionsConcatenation
create_repetition TraceVisualization::RepetitionsIncrementation
decode_psy1_result TraceVisualization::Repetitions
#default_tokens TraceVisualization::Mapping
delete_repetition TraceVisualization::RepetitionsConcatenation
effective TraceVisualization::SuffixArray
effective TraceVisualization::LongestCommonPrefix
effective_linear TraceVisualization::SuffixArray
#equal_positions? TraceVisualization::Data::Repetition
#equal_positions? IRepetition
fake_repetition TraceVisualization::RepetitionsIncrementation
fill_score TraceVisualization::RepetitionsScore
#find_all TraceVisualization::Mapping
#from_file TraceVisualization::Mapping
#from_preprocessed_file TraceVisualization::Mapping
#from_preprocessed_string TraceVisualization::Mapping
#from_string TraceVisualization::Mapping
function_linear TraceVisualization::RepetitionsScore
function_relative TraceVisualization::RepetitionsScore
#get_id IRepetition
#get_left_pos IRepetition
#get_left_pos TraceVisualization::Data::Repetition
#get_right_pos IRepetition
#get_right_pos TraceVisualization::Data::Repetition
hl TraceVisualization::Visualization::ConsoleColorPrint
#id TraceVisualization::Data::Repetition
incrementation TraceVisualization::RepetitionsIncrementation
init TraceVisualization::Mapping
#initialize TraceVisualization::Repetitions::Context
#initialize TraceVisualization::Data::LexemePos
#initialize RepetitionBase
#initialize TraceVisualization::Data::Lexeme
#initialize TraceVisualization::Mapping
#initialize TraceVisualization::Data::Repetition
#install_lexeme TraceVisualization::Mapping
#install_lexeme_m TraceVisualization::Mapping
#int_value TraceVisualization::Data::Lexeme
invert TraceVisualization::Generators::Thue
is_longest_lexeme TraceVisualization::LexemeOverlapFilter
#k RepetitionBase
le_letter TraceVisualization::Repetitions
#left RepetitionBase
#left_length IRepetition
#left_length RepetitionBase
#left_positions IRepetition
#left_positions TraceVisualization::Data::Repetition
#length TraceVisualization::Mapping
#length RepetitionBase
#length TraceVisualization::Data::Lexeme
#lexeme TraceVisualization::Data::LexemePos
#lexeme_length TraceVisualization::Data::Lexeme
#lines RepetitionBase
lines_pos TraceVisualization::Utils
#lines_pos TraceVisualization::Repetitions::Context
#max TraceVisualization::Mapping
#method_missing TraceVisualization::Data::Lexeme
#method_missing TraceVisualization::Mapping
naive TraceVisualization::SuffixArray
naive TraceVisualization::Repetitions
naive TraceVisualization::BurrowsWheelerTransform
naive_all TraceVisualization::Repetitions
#name TraceVisualization::Data::Lexeme
#ord TraceVisualization::Data::Lexeme
#pcount TraceVisualization::Data::Repetition
#pop TraceVisualization::Mapping
#pos TraceVisualization::Data::LexemePos
#positions_size TraceVisualization::Data::Repetition
#positions_size IRepetition
process TraceVisualization::Reorder
process TraceVisualization::LexemeOverlapFilter
#process TraceVisualization::Mapping
process TraceVisualization
process TraceVisualization::RepetitionsConcatenation
process_common_positions TraceVisualization::RepetitionsConcatenation
process_full_search TraceVisualization::RepetitionsConcatenation
#process_line TraceVisualization::Mapping
process_new_repetitions TraceVisualization::RepetitionsConcatenation
#process_preprocessed_line TraceVisualization::Mapping
#process_without_reorder TraceVisualization::Mapping
processing_time TraceVisualization::Profile
psy1 TraceVisualization::Repetitions
psy1_original TraceVisualization::Repetitions
pt TraceVisualization::Profile
read_file TraceVisualization::Utils
#restore TraceVisualization::Mapping
rhash TraceVisualization::Utils
#right RepetitionBase
#right_length IRepetition
#right_length RepetitionBase
#right_positions IRepetition
#right_positions TraceVisualization::Data::Repetition
#rs_by_line TraceVisualization::Repetitions::Context
rs_by_line TraceVisualization::Utils
#score TraceVisualization::Data::Repetition
set_default_options TraceVisualization
#set_left_pos TraceVisualization::Data::Repetition
#set_left_pos IRepetition
#size TraceVisualization::Mapping
#str TraceVisualization::Repetitions::Context
str TraceVisualization::Generators::Fibonacci
str_2_3 TraceVisualization::Generators::Thue
str_3_2 TraceVisualization::Generators::Thue
#strict_ids TraceVisualization::Data::Repetition
#strict_length RepetitionBase
#strict_length IRepetition
time TraceVisualization::Profile
#to_ary TraceVisualization::Mapping
#to_i TraceVisualization::Data::Lexeme
#to_int TraceVisualization::Data::Lexeme
#to_s TraceVisualization::Data::Repetition
#to_s TraceVisualization::Data::Lexeme
#to_str TraceVisualization::Data::Lexeme
#token TraceVisualization::Mapping
#tokens TraceVisualization::Mapping
#value TraceVisualization::Data::Lexeme