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#[] Hash
#[]= Hash
#_on OptionParser
#analysis_category SushiFabric::SushiApp
#batch_mode SushiFabric::SushiApp
#check_application_parameters SushiFabric::SushiApp
#check_latest_modules_version SushiFabric::SushiApp
#check_required_columns SushiFabric::SushiApp
#cluster_nodes SushiFabric::SushiApp
#commands SushiFabric::SushiApp
#copy_commands SushiFabric::SushiApp
#copy_inputdataset_parameter_jobscripts SushiFabric::SushiApp
#copy_nextdataset SushiFabric::SushiApp
#copy_uploaded_files SushiFabric::SushiApp
#current_user SushiFabric::SushiApp
#data_set SushiFabric::SushiApp
#data_type Hash
#data_types Hash
#dataset_has_column? SushiFabric::SushiApp
#dataset_hash SushiFabric::SushiApp
#dataset_mode SushiFabric::SushiApp
#dataset_name SushiFabric::SushiApp
#dataset_sushi_id SushiFabric::SushiApp
#dataset_tsv_file SushiFabric::SushiApp
#default_node SushiFabric::SushiApp
#default_value Hash
#defaults Hash
#description SushiFabric::SushiApp
#employee SushiFabric::SushiApp
#get Hash
#get_columns_with_tag SushiFabric::SushiApp
#inactivate_nodes SushiFabric::SushiApp
#initialize SushiFabric::SushiApp
#input_dataset_bfabric_application_number SushiFabric::SushiApp
#job_footer SushiFabric::SushiApp
#job_header SushiFabric::SushiApp
#job_ids SushiFabric::SushiApp
#job_main SushiFabric::SushiApp
#logger SushiFabric::SushiApp
#main SushiFabric::SushiApp
#make_dummy_files SushiFabric::SushiApp
#make_job_script SushiFabric::SushiApp
#mango_run_name SushiFabric::SushiApp
#mock_run SushiFabric::SushiApp
#modules SushiFabric::SushiApp
#name SushiFabric::SushiApp
#next_dataset SushiFabric::SushiApp
#next_dataset_bfabric_application_number SushiFabric::SushiApp
#next_dataset_comment SushiFabric::SushiApp
#next_dataset_id SushiFabric::SushiApp
#next_dataset_name SushiFabric::SushiApp
#off_bfabric_registration SushiFabric::SushiApp
#on OptionParser
#p OptionParser
#parameterset_tsv_file SushiFabric::SushiApp
#params SushiFabric::SushiApp
#prepare_result_dir SushiFabric::SushiApp
#preprocess SushiFabric::SushiApp
#project SushiFabric::SushiApp
#queue SushiFabric::SushiApp
#required_columns SushiFabric::SushiApp
#required_params SushiFabric::SushiApp
#run SushiFabric::SushiApp
#sample_mode SushiFabric::SushiApp
#save_data_set SushiFabric
#save_data_set SushiFabric::SushiApp
#save_input_dataset_as_tsv SushiFabric::SushiApp
#save_next_dataset_as_tsv SushiFabric::SushiApp
#save_parameters_as_tsv SushiFabric::SushiApp
#save_parameters_in_sushi_db SushiFabric::SushiApp
#set Hash
#set_default_parameters SushiFabric::SushiApp
#set_dir_paths SushiFabric::SushiApp
#set_file_paths SushiFabric::SushiApp
#set_input_dataset SushiFabric::SushiApp
#set_output_files SushiFabric::SushiApp
#set_user_parameters SushiFabric::SushiApp
#submit SushiFabric::SushiApp
#submit_command SushiFabric::SushiApp
#tag? String
#test_run SushiFabric::SushiApp
#user SushiFabric::SushiApp
#workflow_manager SushiFabric::SushiApp