Method List
-
#<< PackedIndex
-
#<< Sharder
-
#SOPT_str Workflow
-
#SOPT_str Task
-
#[] Entity::FormatIndex
-
#[] TSV
-
#[] FixWidthTable
-
#[] Sharder
-
#[] FWTAdapter
-
#[] TSVAdapter
-
#[] NamedArray
-
#[] PKIAdapter
-
#[]= TSVAdapter
-
#[]= TSV::Transformer
-
#[]= Entity::FormatIndex
-
#[]= PKIAdapter
-
#[]= FWTAdapter
-
#[]= Sharder
-
__jobs Scout
-
#_ary_property_cache Entity::Object
-
#_children KnowledgeBase
-
#_dump Step
-
#_ep KnowledgeBase::Traverser
-
#_fp KnowledgeBase::Traverser
-
_load Step
-
#_neighbours KnowledgeBase
-
#_parents KnowledgeBase
-
#_prov_tasks Workflow
-
_select_match AssociationItem
-
#_subset KnowledgeBase
-
#abort WorkQueue
-
#abort TSV::Dumper
-
#abort WorkQueue::Worker
-
#abort Step
-
#abort WorkQueue::Socket
-
#abort_dependencies Step
-
#aborted? Step
-
accumulate_rules Workflow::Orchestrator
-
#add TSV::Dumper
-
#add FixWidthTable
-
#add Filtered::Filter
-
#add PKIAdapter
-
#add FWTAdapter
-
add_batch_deps Workflow::Orchestrator
-
add_config_keys Workflow::Orchestrator
-
#add_field TSV
-
#add_filter Filtered
-
#add_identifiers Entity
-
#add_point FixWidthTable
-
#add_range FixWidthTable
-
#add_range_point FWTAdapter
-
#add_range_point PKIAdapter
-
#add_range_point FixWidthTable
-
add_rules_and_consolidate Workflow::Orchestrator
-
#add_unsaved Filtered::Filter
-
#add_worker WorkQueue
-
adjacency AssociationItem
-
#alias? Step
-
#alias? Task
-
#aliases Top Level Namespace
-
#all KnowledgeBase
-
#all_databases KnowledgeBase
-
#all_dependencies Step
-
#all_exports Workflow
-
#all_fields TSV::Parser
-
#all_fields TSV
-
all_fields TSV
-
#all_fields TSV::Transformer
-
#all_fields TSV::Dumper
-
#all_properties Entity::Object
-
#all_tasks Workflow
-
annonymous_workflow Workflow
-
#annotate KnowledgeBase
-
#annotate_next_task Workflow
-
#annotate_next_task_single Workflow
-
annotation_repo_persist Persist
-
#archive_deps Step
-
#archived_info Step
-
#archived_inputs Step
-
array_method Entity::Property
-
#assign_inputs Task
-
#assignments KnowledgeBase::Traverser
-
#asynchronous_exports Workflow
-
#attach TSV
-
attach TSV
-
autoinstall Workflow
-
#available_resources Workflow::LocalExecutor
-
#base_entity Entity::Object
-
#batch_base_dir SchedulerJob
-
batch_dir_for_id SchedulerJob
-
batch_options SchedulerJob
-
batch_system_variables SLURM
-
batch_system_variables SchedulerJob
-
#bundle_files Step
-
#callback WorkQueue
-
candidates Workflow::LocalExecutor
-
#canfail? Step
-
cast_value TSV
-
chain_batches Workflow::Orchestrator
-
change_id TSV
-
#change_id TSV
-
change_key TSV
-
#change_key TSV
-
check_chains Workflow::Orchestrator
-
#check_resources Workflow::LocalExecutor
-
#child Step
-
#children KnowledgeBase
-
#chunked_values_at FixWidthTable
-
#clean Filtered::Filter
-
#clean WorkQueue
-
clean Step
-
#clean Step
-
#clean WorkQueue::Socket
-
#clean_matches KnowledgeBase::Traverser
-
#clean_name Step
-
#cleaned WorkQueue::Socket
-
cleanup_environment SchedulerJob
-
#clear_batch Workflow::LocalExecutor
-
#clear_exports Workflow
-
#close TSV::Dumper
-
#close FixWidthTable
-
#close ScoutTKRZW
-
#close WorkQueue
-
#close ScoutCabinet
-
#close PackedIndex
-
#close TSVAdapter
-
#close Sharder
-
#close_read WorkQueue::Socket
-
#close_write WorkQueue::Socket
-
#closed Sharder
-
#closed TSVAdapter
-
#closed? ScoutCabinet
-
#closed? Sharder
-
#closed? TSVAdapter
-
#closed_read? WorkQueue::Socket
-
#closed_write? WorkQueue::Socket
-
#closest FixWidthTable
-
#cmd Step
-
#cmd_alias Top Level Namespace
-
coda SchedulerJob
-
collapse_stream TSV
-
#collapse_stream TSV
-
#collect Sharder
-
#collect TSVAdapter
-
#collect TSV
-
#column TSV
-
#commands Top Level Namespace
-
#compact TSV::Dumper
-
#compute Step
-
concat_streams TSV
-
#config Step
-
#config_file KnowledgeBase
-
#consume_all_streams Step
-
csv TSV
-
#data Filtered::Filter
-
database Association
-
#database Sharder
-
#database_description_file KnowledgeBase
-
#database_file KnowledgeBase
-
#database_identifier_files KnowledgeBase
-
#databases Sharder
-
#db_namespace KnowledgeBase
-
#db_type Sharder
-
default_directory Task
-
#define_entity_modules KnowledgeBase
-
#delete TSVAdapter
-
#delete_list KnowledgeBase
-
#dep Workflow
-
#dep_tree Workflow
-
#dependencies Task
-
#dependencies Step
-
#desc Workflow
-
#description Workflow
-
#description KnowledgeBase
-
#digest_str TSV::Parser
-
#digest_str TSV::Dumper
-
#digest_str TSV
-
#digest_str Step
-
#digest_str Path
-
#dir KnowledgeBase
-
directory Workflow
-
#directory Task
-
#directory Workflow
-
#dirty? Step
-
doc_parse_chunks KnowledgeBase
-
doc_parse_chunks Workflow
-
doc_parse_first_line Workflow
-
doc_parse_up_to Workflow
-
doc_parse_up_to KnowledgeBase
-
#documentation Workflow
-
#documentation_markdown KnowledgeBase
-
#documentation_markdown Workflow
-
#done? Step
-
done_batch? Workflow::Orchestrator
-
dump TSVAdapter::StringDoubleArraySerializer
-
dump TSVAdapter::TSVSerializer
-
dump TSVAdapter::StringArraySerializer
-
dump TSVAdapter::FloatSerializer
-
dump TSVAdapter::StrictIntegerArraySerializer
-
#dump WorkQueue::Socket
-
dump TSVAdapter::CleanSerializer
-
dump TSVAdapter::FloatArraySerializer
-
dump TSVAdapter::BinarySerializer
-
dump TSVAdapter::StringSerializer
-
dump TSVAdapter::IntegerSerializer
-
dump TSVAdapter::StrictFloatArraySerializer
-
dump TSVAdapter::TSVMarshalSerializer
-
dump TSVAdapter::IntegerArraySerializer
-
#dump FixWidthTable
-
dump_memory Scout
-
#dumper TSV::Transformer
-
#dumper_stream TSV
-
#each Sharder
-
#each TSV::Transformer
-
#each FWTAdapter
-
#each PKIAdapter
-
#each TSV
-
#each_annotation_hash_key TSVAdapter
-
#enrichment KnowledgeBase
-
ensure_semaphore_name ScoutSemaphore
-
#entities KnowledgeBase
-
#entity_classes Entity::Object
-
#entity_name EntityWorkflow
-
#entity_options KnowledgeBase
-
#entity_options_for KnowledgeBase
-
entity_property_cache Entity
-
#entity_task EntityWorkflow
-
#entity_task_alias EntityWorkflow
-
#entity_types KnowledgeBase
-
#erase_job_dependencies Workflow::LocalExecutor
-
#error? Step
-
#exception Step
-
#exception WorkQueue::Socket
-
#exec Step
-
exec_cmd SchedulerJob
-
#exec_context Step
-
#exec_exports Workflow
-
#exec_on Task
-
execute SchedulerJob
-
#exit_status CmdStop
-
extended ShardAdapter
-
extended EntityWorkflow
-
extended TKAdapter
-
extended Workflow
-
extended FWTAdapter
-
extended Entity
-
extended TSVAdapter
-
extended PKIAdapter
-
extended Filtered
-
#extension Workflow
-
extract_specs Association
-
#fieldnum Filtered::Filter
-
#fields TSV::Parser
-
#fields TSV::Transformer
-
#fields TSV::Dumper
-
#fields KnowledgeBase
-
#fields= TSV::Dumper
-
#fields= TSV::Transformer
-
#file Step
-
#file PackedIndex
-
#file FixWidthTable
-
file_time Scout
-
#filename FixWidthTable
-
#filename TSV::Dumper
-
#files Step
-
#files_dir Step
-
#files_dir= Step
-
#filter Association::Index
-
#filter TSV
-
#filtered_collect Filtered
-
#filtered_delete Filtered
-
#filtered_each Filtered
-
#filtered_filename Filtered
-
#filtered_keys Filtered
-
#filtered_set Filtered
-
#filtered_values Filtered
-
#filters Filtered::FilterArray
-
#find Entity::FormatIndex
-
#find_in_dependencies Workflow
-
#find_paths KnowledgeBase::Traverser
-
#fingerprint Step
-
#fingerprint TSV::Parser
-
#fingerprint TSV::Dumper
-
#fingerprint TSV
-
#first_line TSV::Parser
-
follow_job SchedulerJob
-
#fork Step
-
fork_each_on_semaphore ScoutSemaphore
-
#format KnowledgeBase
-
#format FixWidthTable
-
#format= Entity
-
format_input Task
-
formats Entity
-
#full_task_name Step
-
get FixWidthTable
-
#get_SOPT Workflow
-
get_SOPT Workflow
-
#get_SOPT Task
-
#get_database KnowledgeBase
-
#get_index KnowledgeBase
-
#get_point FixWidthTable
-
#get_position PackedIndex
-
#get_prefix Sharder
-
#get_prefix TSVAdapter
-
#get_range FixWidthTable
-
#grace Step
-
#head TSV
-
header LSF
-
header SchedulerJob
-
header TSV::Dumper
-
header SLURM
-
header PBS
-
headers Association
-
#helper Workflow
-
#helpers Workflow
-
hold_dependencies SchedulerJob
-
#id Step
-
#id_dbs KnowledgeBase::Traverser
-
#identifier_files KnowledgeBase
-
identifier_files Entity
-
identifier_files TSV
-
#identifier_files Entity::Identified
-
#identifier_index Entity::Identified
-
#identify KnowledgeBase::Traverser
-
#identify KnowledgeBase
-
identify_entity_format Association
-
#identify_field TSV::Parser
-
#identify_field TSV
-
identify_field TSV
-
#identify_field TSV::Transformer
-
#identify_path Step
-
#identify_source KnowledgeBase
-
#identify_target KnowledgeBase
-
#identity_type Entity::Identified
-
#ids Filtered::FilterArray
-
#ids Filtered::Filter
-
#idx_overlap FixWidthTable
-
#idx_pos FixWidthTable
-
#idx_pos_end FixWidthTable
-
#idx_value FixWidthTable
-
#ignore_ouput WorkQueue::Worker
-
#ignore_ouput WorkQueue
-
#importtsv ScoutCabinet
-
importtsv ScoutCabinet
-
incidence TSV
-
incidence AssociationItem
-
#include? TSVAdapter
-
#include? KnowledgeBase
-
#include? PKIAdapter
-
#include? Entity::FormatIndex
-
#include? ShardAdapter
-
#include? FWTAdapter
-
#include? Sharder
-
#include? TSV::Transformer
-
#include_workflow Workflow
-
included Entity::Identified
-
index TSV
-
#index TSV
-
#index Path
-
index Association
-
#index_fields KnowledgeBase
-
#info KnowledgeBase
-
#info Step
-
#info_file Step
-
#init TSV::Dumper
-
#init_info Step
-
#initialize PackedIndex
-
#initialize KnowledgeBase
-
#initialize Step
-
#initialize CmdStop
-
#initialize Entity::FormatIndex
-
#initialize WorkQueue
-
#initialize TSV::Parser
-
#initialize Sharder
-
#initialize DoneProcessing
-
#initialize FixWidthTable
-
#initialize TSV::Dumper
-
#initialize Workflow::LocalExecutor
-
#initialize WorkQueue::Worker
-
#initialize WorkQueue::Socket
-
#initialize WorkerException
-
#initialize KnowledgeBase::Traverser
-
#initialize Filtered::Filter
-
#initialize TSV::Transformer
-
#initialized TSV::Dumper
-
#input Workflow
-
#input_dependencies Step
-
#inputs Task
-
#inputs Step
-
#inspect TSV::Parser
-
#inspect TSV::Dumper
-
#inspect TSV
-
install_workflow Workflow
-
installed_workflows Workflow
-
#is_list? KnowledgeBase::Traverser
-
#is_wildcard? KnowledgeBase::Traverser
-
#item_size PackedIndex
-
#job Task
-
#job Workflow
-
job_batches Workflow::Orchestrator
-
job_cache Workflow
-
job_chains Workflow::Orchestrator
-
job_dependencies Workflow::Orchestrator
-
job_info Scout
-
job_path? Step
-
job_queued SchedulerJob
-
job_resources Workflow::Orchestrator
-
job_rules Workflow::Orchestrator
-
job_status PBS
-
job_status SLURM
-
job_status LSF
-
job_template SchedulerJob
-
job_workload Workflow::Orchestrator
-
jobs SchedulerJob
-
#join Step
-
#join WorkQueue
-
#join WorkQueue::Worker
-
join WorkQueue::Worker
-
#kb KnowledgeBase::Traverser
-
#key Filtered::Filter
-
#key_field TSV::Parser
-
#key_field TSV::Dumper
-
#key_field TSV::Transformer
-
#key_field= TSV::Dumper
-
#key_field= TSV::Transformer
-
#keys FWTAdapter
-
#keys Sharder
-
#keys ScoutTKRZW
-
#keys ShardAdapter
-
#keys PKIAdapter
-
#keys_annotation_hash_key TSVAdapter
-
#knowledge_base Workflow
-
#knowledge_base_description_file KnowledgeBase
-
#last_pos FixWidthTable
-
#libdir Workflow
-
list Workflow
-
#list Filtered::Filter
-
#list_file KnowledgeBase
-
#list_task EntityWorkflow
-
#list_task_alias EntityWorkflow
-
list_tsv_values Annotation
-
#lists KnowledgeBase
-
load TSVAdapter::FloatArraySerializer
-
load TSVAdapter::IntegerSerializer
-
#load KnowledgeBase
-
load KnowledgeBase
-
#load Step
-
load TSVAdapter::FloatSerializer
-
load TSVAdapter::TSVSerializer
-
load TSVAdapter::IntegerArraySerializer
-
load TSVAdapter::StringSerializer
-
load TSVAdapter::StrictIntegerArraySerializer
-
#load WorkQueue::Socket
-
load TSVAdapter::StrictFloatArraySerializer
-
load TSVAdapter::StringArraySerializer
-
load TSVAdapter::CleanSerializer
-
load Step
-
load TSVAdapter::TSVMarshalSerializer
-
load TSVAdapter::BinarySerializer
-
load TSVAdapter::StringDoubleArraySerializer
-
#load_annotation_hash ShardAdapter
-
#load_annotation_hash PKIAdapter
-
#load_annotation_hash FWTAdapter
-
#load_annotation_hash TSVAdapter
-
load_conda SchedulerJob
-
#load_info Step
-
load_info Step
-
load_info Annotation
-
load_input_from_file Task
-
#load_inputs Task
-
#load_job Workflow
-
#load_list KnowledgeBase
-
load_lock Scout
-
load_modules SchedulerJob
-
load_rules Workflow::Orchestrator
-
load_rules_for_job Workflow::Orchestrator
-
load_stream ScoutCabinet
-
load_tsv Annotation
-
load_tsv_values Annotation
-
#load_value TSVAdapter
-
#load_variable KnowledgeBase
-
#lock TSVAdapter
-
#lock_and_close TSVAdapter
-
lock_dir TSVAdapter
-
lock_info Scout
-
locks Scout
-
#log Step
-
main Workflow
-
#markdown KnowledgeBase
-
#marshal_load Step
-
#mask FixWidthTable
-
#mask PackedIndex
-
#mask_length PackedIndex
-
#match Association::Index
-
#match Filtered::Filter
-
match_keys TSV
-
#matches KnowledgeBase::Traverser
-
#melt_columns TSV
-
#merge TSV
-
#merge! Sharder
-
#merge! TSVAdapter
-
#merge_info Step
-
merge_rule_file Workflow::Orchestrator
-
merge_rules Workflow::Orchestrator
-
#merge_zip TSV
-
#message Step
-
#message DoneProcessing
-
#messages Step
-
meta_data SchedulerJob
-
#metadata_file ShardAdapter
-
#metadata_file PKIAdapter
-
#metadata_file FWTAdapter
-
#method_missing Filtered::FilterArray
-
#monitor_stream Step
-
multi_method Entity::Property
-
#multiple_task EntityWorkflow
-
#multiple_task_alias EntityWorkflow
-
#mutex Sharder
-
#name Step
-
#name Workflow
-
name2clean_name Workflow
-
#namespace TSV::Transformer
-
#namespace KnowledgeBase
-
#namespace TSV::Dumper
-
#neighbours KnowledgeBase
-
#new_worker WorkQueue
-
#newer_dependencies Step
-
#nil_string PackedIndex
-
#non_default_inputs Step
-
normalize_resources_from_rules Workflow::Orchestrator
-
normalize_specs Association
-
obj_tsv_values Annotation
-
#offset PackedIndex
-
open Association
-
open ScoutCabinet
-
open TSV
-
open ScoutTKRZW
-
open_database Persist
-
open_fwt Persist
-
#open_options ScoutTKRZW
-
open_pki Persist
-
open_sharder Persist
-
open_tokyocabinet Persist
-
#options TSV::Transformer
-
#options TSV::Parser
-
#options TSV::Dumper
-
#options TSV
-
#orig_get TSVAdapter
-
#orig_include? Entity::FormatIndex
-
#orig_set TSVAdapter
-
#original_digest_str Path
-
original_setup TSV
-
#overlaps FixWidthTable
-
#overriden Step
-
#overriden? Step
-
#overriden_deps Step
-
#overriden_task Step
-
#overriden_workflow Step
-
#page TSV
-
#pair KnowledgeBase
-
#parents KnowledgeBase
-
parse TSV
-
parse_chains Workflow::Orchestrator
-
parse_field_specification Association
-
parse_header TSV
-
#parse_key_field Association::Index
-
parse_knowledge_base_doc KnowledgeBase
-
parse_line TSV
-
parse_options TSV
-
parse_stream TSV
-
parse_workflow_doc Workflow
-
#parser TSV::Transformer
-
paste_streams TSV
-
#path Step
-
#persist Workflow
-
persist Entity::Property
-
#persist Entity::Property
-
persist_info Scout
-
#persist_options Sharder
-
persist_tsv Persist
-
#persisted? Entity::Property
-
#persisted_methods Entity::Property
-
#persistence Filtered::Filter
-
#persistence_class TSVAdapter
-
#persistence_class ScoutCabinet
-
#persistence_class ScoutTKRZW
-
#persistence_path FixWidthTable
-
#persistence_path TSVAdapter
-
#persistence_path ScoutCabinet
-
#persistence_path ScoutTKRZW
-
#persistence_path Sharder
-
#persistence_path PackedIndex
-
#persistence_path= FWTAdapter
-
#persistence_path= PKIAdapter
-
persists Scout
-
#pid Step
-
#pid WorkQueue::Worker
-
#pid DoneProcessing
-
#pid WorkerException
-
#pid= Step
-
#pop WorkQueue::Socket
-
#pop_filter Filtered
-
#pos_function FWTAdapter
-
#pos_function PKIAdapter
-
#pos_index TSV
-
pos_index TSV
-
#preamble TSV::Parser
-
#prefix TSVAdapter
-
#prefix ShardAdapter
-
#prefix Sharder
-
#prepare_entity TSV
-
prepare_entity Entity
-
prepare_environment SchedulerJob
-
prepare_submision SchedulerJob
-
#present? Step
-
#present_databases KnowledgeBase
-
#prev_dir Top Level Namespace
-
#print_error Top Level Namespace
-
#process WorkQueue::Worker
-
#process TSV
-
process Workflow::LocalExecutor
-
#process WorkQueue
-
#process Workflow::LocalExecutor
-
#process_batches Workflow::LocalExecutor
-
process_batches Workflow::Scheduler
-
process_formats Association
-
#process_inputs Task
-
process_mask PackedIndex
-
process_stream TSV
-
produce Workflow::LocalExecutor
-
#produce Step
-
produce Workflow::Scheduler
-
produce Workflow
-
#produce KnowledgeBase
-
produce_dependencies Workflow::LocalExecutor
-
#progress_bar Step
-
#properties Entity::Property
-
#property Entity::Property
-
#property_task EntityWorkflow
-
#property_task_alias EntityWorkflow
-
prov_indent Step
-
prov_report Step
-
prov_report_msg Step
-
prov_status_msg Step
-
#prov_string Workflow
-
#prov_tree Workflow
-
#provided_inputs Step
-
purge_duplicates Workflow::LocalExecutor
-
#push WorkQueue::Socket
-
#queue_id WorkQueue::Worker
-
#queue_id WorkQueue
-
queue_job Workflow
-
#range Sharder
-
#range TSVAdapter
-
#range FixWidthTable
-
range_index TSV
-
#range_index TSV
-
#read ScoutCabinet
-
#read PackedIndex
-
#read TSVAdapter
-
#read FixWidthTable
-
#read Sharder
-
#read ScoutTKRZW
-
#read? TSVAdapter
-
#read? Sharder
-
#read_and_close TSVAdapter
-
#read_and_close Sharder
-
#read_lock TSVAdapter
-
#read_sem WorkQueue::Socket
-
#reassign KnowledgeBase::Traverser
-
#rec_dependencies Step
-
#rec_input_defaults Workflow
-
#rec_input_descriptions Workflow
-
#rec_input_options Workflow
-
#rec_input_types Workflow
-
#rec_input_use Workflow
-
#rec_inputs Workflow
-
#record_size FixWidthTable
-
#recoverable_error? Step
-
#recursive_clean Step
-
#recursive_deps Workflow
-
#recursive_inputs Step
-
#recursive_inputs Task
-
#register KnowledgeBase
-
#registered_options KnowledgeBase
-
#registry KnowledgeBase
-
#release_resources Workflow::LocalExecutor
-
relocate Step
-
#remove_one_worker WorkQueue
-
#remove_worker WorkQueue
-
#reorder TSV
-
#report_status Step
-
require_workflow Workflow
-
require_workflow_file Workflow
-
#reset Filtered::Filter
-
#reset_filters TSV
-
#reset_info Step
-
resolve_tsv_array Annotation
-
resources_from_rules_hash Workflow::Orchestrator
-
#resources_requested Workflow::LocalExecutor
-
#resources_used Workflow::LocalExecutor
-
#result Step
-
#returns Workflow
-
#reverse Association::Index
-
#rules KnowledgeBase::Traverser
-
#run WorkQueue::Worker
-
#run Step
-
#run_batch Workflow::LocalExecutor
-
#run_dependencies Step
-
run_job SchedulerJob
-
run_template PBS
-
run_template LSF
-
run_template SLURM
-
#running? Step
-
safe_create_semaphore ScoutSemaphore
-
safe_delete_semaphore ScoutSemaphore
-
safe_post_semaphore ScoutSemaphore
-
safe_wait_semaphore ScoutSemaphore
-
#save Filtered::Filter
-
#save KnowledgeBase
-
#save_annotation_hash FWTAdapter
-
#save_annotation_hash PKIAdapter
-
#save_annotation_hash ShardAdapter
-
#save_annotation_hash TSVAdapter
-
save_file_input Task
-
#save_info Step
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save_input Task
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#save_input_bundle Step
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#save_inputs Task
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#save_inputs Step
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#save_list KnowledgeBase
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#save_value TSVAdapter
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#save_variable KnowledgeBase
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#saved Filtered::Filter
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scout_job_exec_cmd SchedulerJob
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#scout_usage Top Level Namespace
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select AssociationItem
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select TSV
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#select TSV
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#select_entities KnowledgeBase
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sensiblewrite_info Scout
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sensiblewrites Scout
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#sep TSV::Dumper
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#sep= TSV::Transformer
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#serializer TSVAdapter
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serializer_module TSVAdapter
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#set_info Step
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#set_stream TSV::Dumper
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#setup KnowledgeBase
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setup MultipleResult
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setup TSV
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#shard_function Sharder
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#short_path Step
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single_method Entity::Property
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#size FixWidthTable
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#size Sharder
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#size ShardAdapter
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#size PKIAdapter
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#size Filtered
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#size FWTAdapter
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#size PackedIndex
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#size_annotation_hash_key TSVAdapter
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#slice TSV
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#socket_id WorkQueue::Socket
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#sort TSV
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#sort_by TSV
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sort_candidates Workflow::LocalExecutor
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#source KnowledgeBase
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#source_index KnowledgeBase
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#source_options TSV::Parser
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#source_type KnowledgeBase
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#sread WorkQueue::Socket
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#started? Step
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#status Step
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status_color Step
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#step Step
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step_file? Path
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#step_module Workflow
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str2options TSV
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str_setup TSV
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#stream TSV::Transformer
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#stream Step
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#stream PackedIndex
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#stream TSV::Parser
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#stream TSV::Dumper
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#stream_exports Workflow
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#streaming? Step
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#subset KnowledgeBase
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#subset Association::Index
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#subset TSV
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#summary TSV
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#swrite WorkQueue::Socket
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sync_environment SchedulerJob
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#synchronize Step
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synchronize ScoutSemaphore
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#synchronous_exports Workflow
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system SLURM
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system PBS
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system LSF
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system SchedulerJob
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#target KnowledgeBase
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#target_index KnowledgeBase
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#target_type KnowledgeBase
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#task Workflow
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#task Step
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#task_alias Workflow
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#task_info Workflow
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#task_jobs Workflow
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#task_jobs_files Workflow
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#task_name Step
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#task_signature Step
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task_specific_rules Workflow::Orchestrator
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#tee_copies Step
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#terminated? Step
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thread_each_on_semaphore ScoutSemaphore
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#timer Workflow::LocalExecutor
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#title Workflow
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#tmp_path Step
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#to_double TSV
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#to_flat TSV
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#to_hash TSV
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#to_json Step
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#to_list TSV
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#to_matrix Association::Index
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#to_s Workflow
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#to_s TSV
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#to_single TSV
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#tokenize_cmd_params Top Level Namespace
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trace Workflow
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trace_job_summary Workflow
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trace_job_times Workflow
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translate TSV
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#translate TSV
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#translate KnowledgeBase
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translation_path TSV
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#transpose TSV
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#transpose_list TSV
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#traverse KnowledgeBase
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#traverse KnowledgeBase::Traverser
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#traverse Step
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#traverse TSV::Transformer
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#traverse TSV
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#traverse TSV::Parser
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traverse Open
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traverse TSV
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traverse_add Open
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#traverse_db KnowledgeBase::Traverser
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#tsv TSV::Transformer
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tsv Annotation
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tsv Persist
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#tsv TSV::Dumper
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#tsv Path
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#tsv_options Path
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#type TSV::Transformer
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#type Step
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#type TSV::Parser
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#type TSV::Dumper
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#type= TSV::Transformer
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#undirected KnowledgeBase
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#unexport Workflow
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#unnamed TSV::Transformer
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#unpersist Entity::Property
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unqueue Workflow
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#unsaved Filtered::Filter
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#unzip TSV
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unzip TSV
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#update Filtered::Filter
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update_workflow_dir Workflow
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#updated? Step
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#usage Workflow
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#usage Task
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#value Filtered::Filter
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#value PKIAdapter
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#value_size FixWidthTable
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#values TSVAdapter
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#values_at TSVAdapter
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#values_at FixWidthTable
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#values_at PackedIndex
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version Scout
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version_file Association
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wait_for_job SchedulerJob
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wait_for_jobs Step
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#waiting? Step
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#wildcard KnowledgeBase::Traverser
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#with_filters TSV
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#with_read TSVAdapter
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with_retry ScoutSemaphore
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with_semaphore ScoutSemaphore
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#with_stream TSV::Parser
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#with_unnamed TSV::Transformer
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#with_unnamed TSV
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#with_write TSVAdapter
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#worker_exception WorkerException
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#worker_id WorkQueue::Worker
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#worker_proc WorkQueue
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#worker_short_id WorkQueue::Worker
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#workers WorkQueue
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#workflow Step
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workflow_dir Workflow
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workflow_repo Workflow
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workflow_rules Workflow::Orchestrator
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workflows Workflow
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#writable TSVAdapter
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#writable Sharder
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#write TSVAdapter
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#write Sharder
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#write ScoutTKRZW
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#write PackedIndex
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#write WorkQueue
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#write FixWidthTable
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#write ScoutCabinet
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#write? TSVAdapter
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#write? Sharder
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#write? FixWidthTable
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#write? ScoutCabinet
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#write_and_close TSVAdapter
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#write_and_close Sharder
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#write_and_close ScoutCabinet
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#write_and_read TSVAdapter
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#write_and_read Sharder
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#write_and_read ScoutCabinet
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#write_file TSV
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#write_lock TSVAdapter
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#write_sem WorkQueue::Socket
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#zip TSV
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#zip_new TSV