Method List
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attach_function HTS::LibHTS
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bam_cigar_gen HTS::LibHTS
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bam_cigar_op HTS::LibHTS
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bam_cigar_opchr HTS::LibHTS
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bam_cigar_oplen HTS::LibHTS
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bam_cigar_type HTS::LibHTS
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bam_get_aux HTS::LibHTS
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bam_get_cigar HTS::LibHTS
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bam_get_l_aux HTS::LibHTS
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bam_get_qname HTS::LibHTS
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bam_get_qual HTS::LibHTS
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bam_get_seq HTS::LibHTS
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bam_is_mrev HTS::LibHTS
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bam_is_rev HTS::LibHTS
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bam_seqi HTS::LibHTS
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#base_at HTS::Bam::Record
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#base_qualities HTS::Bam::Record
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#base_quality_at HTS::Bam::Record
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bcf_hdr_nsamples HTS::LibHTS
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bit_fields FFI::BitStruct
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bit_fields_hash_table FFI::BitStruct
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#build HTS::Tbx
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#cget HTS::Fai
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#chrom HTS::Bam::Record
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#chrom_size HTS::Fai
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#cigar HTS::Bam::Record
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#close HTS::Bam
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#close HTS::Fai
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#delete HTS::VCF::Info
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#delete HTS::VCF::Format
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#dup? HTS::Bam::Flag
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#each HTS::Bam
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#each HTS::VCF
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#each HTS::Bam::Cigar
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#file_path HTS::VCF
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#file_path HTS::Bam
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#flag HTS::Bam::Record
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#flag_str HTS::Bam::Record
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#flush HTS::Bam
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#formats HTS::VCF::Record
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#genotypes HTS::VCF::Format
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#genotypes HTS::VCF::Record
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#get HTS::VCF::Format
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#get HTS::Fai
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#get HTS::VCF::Info
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#h HTS::Bam::Header
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#h HTS::VCF::Header
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#has_flag? HTS::Bam::Flag
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#has_flag? HTS::VCF::Info
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#header HTS::VCF
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#header HTS::Bam
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#htf HTS::Bam
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#htf HTS::VCF
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#id HTS::VCF::Record
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#initialize HTS::Bam::Flag
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#initialize HTS::VCF
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#initialize HTS::Tbx
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#initialize HTS::VCF::Record
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#initialize HTS::VCF::Format
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#initialize HTS::Fai
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#initialize HTS::Bam
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#initialize HTS::VCF::Header
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#initialize HTS::VCF::Info
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#initialize HTS::Bam::Record
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#initialize HTS::Bam::Header
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#initialize HTS::Bam::Cigar
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#isize HTS::Bam::Record
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lib_path HTS
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#mapping_quality HTS::Bam::Record
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#mate_chrom HTS::Bam::Record
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#mate_reverse? HTS::Bam::Flag
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#mate_start HTS::Bam::Record
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#mate_tid HTS::Bam::Record
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#mate_unmapped? HTS::Bam::Flag
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#mode HTS::VCF
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#mode HTS::Bam
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#n_samples HTS::VCF
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open HTS::Fai
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#paired? HTS::Bam::Flag
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#pos HTS::VCF::Record
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#proper_pair? HTS::Bam::Flag
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#qcfail? HTS::Bam::Flag
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#qlen HTS::Bam::Record
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#qname HTS::Bam::Record
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#qual HTS::VCF::Record
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#query HTS::Bam
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#read1? HTS::Bam::Flag
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#read2? HTS::Bam::Flag
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#ref HTS::VCF::Record
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#reverse? HTS::Bam::Flag
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#rlen HTS::Bam::Record
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rom_sam_str HTS::Bam::Record
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sam_itr_next HTS::LibHTS
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search_htslib HTS
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#secondary? HTS::Bam::Flag
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#seq HTS::VCF
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#seqs HTS::Bam::Header
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#seqs HTS::VCF::Header
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#sequence HTS::Bam::Record
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#sequences HTS::Tbx
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#set HTS::VCF::Info
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#set HTS::VCF::Format
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#size HTS::Fai
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#start HTS::VCF::Record
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#start HTS::Bam::Record
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#stop HTS::VCF::Record
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#stop HTS::Bam::Record
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#strand HTS::Bam::Record
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struct_layout FFI::Struct
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#supplementary? HTS::Bam::Flag
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#tags HTS::Bam::Record
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#text HTS::Bam::Header
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#text HTS::VCF::Header
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#tid HTS::Bam::Record
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#to_s HTS::Bam::Cigar
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union_layout FFI::Struct
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#unmapped? HTS::Bam::Flag
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#value HTS::Bam::Flag
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#write HTS::Bam