Module: CollectionObjectsHelper
- Defined in:
- app/helpers/collection_objects_helper.rb
Instance Method Summary collapse
- #collection_object_autocomplete_tag(collection_object) ⇒ Object
-
#collection_object_browse_next_by_identifier(collection_object) ⇒ link_to
This may not work for all identifier types, i.e.
-
#collection_object_browse_previous_by_identifier(collection_object) ⇒ link_to
This may not work for all identifier types, i.e.
-
#collection_object_count_by_classification(scope = nil) ⇒ Object
Perhaps a /lib/catalog method.
- #collection_object_deaccession_tag(collection_object) ⇒ Object
- #collection_object_identifier_tag(collection_object) ⇒ Object
- #collection_object_link(collection_object) ⇒ Object
- #collection_object_loan_tag(collection_object) ⇒ Object
- #collection_object_metadata_badge(collection_object) ⇒ Object
-
#collection_object_preparation_by_classification(scope = nil) ⇒ Object
Perhaps a /lib/catalog method.
- #collection_object_radial_tag(collection_object) ⇒ Object
-
#collection_object_scientific_name(collection_object) ⇒ Object
Text only, taxon name cached or OTU name for the most recent determination.
-
#collection_object_tag(collection_object) ⇒ Object
Return [String, nil] a descriptor including the identifier and determination.
- #collection_object_taxon_determination_tag(collection_object) ⇒ Object
- #collection_object_to_geo_json_feature(collection_object, base = true) ⇒ GeoJSON feature?
-
#collection_object_visualized_identifier(collection_object) ⇒ Array [Identifier, String (type)]?
Also checks virtual container for identifier by proxy.
- #collection_objects_search_form ⇒ Object
- #dwc_occurrence_table_body_tag(collection_objects) ⇒ Object
-
#dwc_occurrence_table_header_tag ⇒ Object
TODO: Isolate into own helper TODO: syncronize with class methods.
- #dwc_occurrence_table_row_stub(collection_object) ⇒ Object
- #dwc_occurrence_table_row_tag(dwc_occurrence) ⇒ Object
- #dwc_table(collection_objects) ⇒ Object
- #label_for_collection_object(collection_object) ⇒ Object
- #table_example(collection_objects) ⇒ Object
- #verify_accessions_task_link(collection_object) ⇒ Object
Instance Method Details
#collection_object_autocomplete_tag(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 69 def collection_object_autocomplete_tag(collection_object) return nil if collection_object.nil? [ collection_object_loan_tag(collection_object), collection_object_deaccession_tag(collection_object), collection_object_identifier_tag(collection_object), collection_object_taxon_determination_tag(collection_object) ].join(' ').html_safe end |
#collection_object_browse_next_by_identifier(collection_object) ⇒ link_to
Returns this may not work for all identifier types, i.e. those with identifiers like ‘123.34` or `3434.33X` may not increment correctly.
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# File 'app/helpers/collection_objects_helper.rb', line 215 def collection_object_browse_next_by_identifier(collection_object) return nil if collection_object.nil? o = collection_object.next_by_identifier return content_tag(:div, 'None', 'class' => 'navigation-item disable') if o.nil? link_text = content_tag(:span, 'Next by id', 'class' => 'small-icon icon-right', 'data-icon' => 'arrow-right') link_to(link_text, browse_collection_objects_task_path(collection_object_id: o.id), data: {arrow: :next, 'no-turbolinks' => 'false', help: 'Sorts by identifier type, namespace, then an conversion of identifier into integer. Will not work for all identifier types.'}, class:'navigation-item') end |
#collection_object_browse_previous_by_identifier(collection_object) ⇒ link_to
Returns this may not work for all identifier types, i.e. those with identifiers like ‘123.34` or `3434.33X` may not increment correctly.
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# File 'app/helpers/collection_objects_helper.rb', line 201 def collection_object_browse_previous_by_identifier(collection_object) return nil if collection_object.nil? o = collection_object.previous_by_identifier return content_tag(:div, 'None', 'class' => 'navigation-item disable') if o.nil? link_text = content_tag(:span, 'Previous by id', 'class' => 'small-icon icon-left', 'data-icon' => 'arrow-left') link_to(link_text, browse_collection_objects_task_path(collection_object_id: o.id), data: { arrow: :previous, 'no-turbolinks' => 'true', help: 'Sorts by identifier type, namespace, then an conversion of identifier into integer. Will not work for all identifier types.'}, class: 'navigation-item') end |
#collection_object_count_by_classification(scope = nil) ⇒ Object
Perhaps a /lib/catalog method
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# File 'app/helpers/collection_objects_helper.rb', line 282 def collection_object_count_by_classification(scope = nil) return [] if scope.nil? specimen_data = {} lot_data = {} total_index = {} scope.each do |n| a = ::Queries::CollectionObject::Filter.new(project_id: sessions_current_project_id, taxon_name_id: n.id, descendants: true, collection_object_type: 'Specimen').all b = ::Queries::CollectionObject::Filter.new(project_id: sessions_current_project_id, taxon_name_id: n.id, descendants: true, collection_object_type: 'Lot').all ts = CollectionObject.where(id: a).calculate(:sum, :total) tl = CollectionObject.where(id: b).calculate(:sum, :total) if (ts > 0) || (tl > 0) lot_data[n.cached] = tl specimen_data[n.cached] = ts total_index[n.cached] = ts + tl end end # We only need to sort 1 pile! specimen_data = specimen_data.sort{|a,b| total_index[b[0]] <=> total_index[a[0]] }.to_h return { total_index:, data: [ { name: 'Specimen', data: specimen_data}, { name: 'Lot', data: lot_data} ] } end |
#collection_object_deaccession_tag(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 115 def collection_object_deaccession_tag(collection_object) return nil if collection_object.nil? || (collection_object.deaccession_reason.blank? && collection_object.deaccessioned_at.nil?) msg = ['DEACCESSIONED"', collection_object.deaccession_reason, collection_object.deaccessioned_at&.year].compact.join(' - ') content_tag(:span, msg, class: [ :feedback, 'feedback-thin', 'feedback-danger' ]).html_safe end |
#collection_object_identifier_tag(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 103 def collection_object_identifier_tag(collection_object) return nil if collection_object.nil? t, i = collection_object_visualized_identifier(collection_object) return content_tag(:span, i, class: [ :feedback, 'feedback-thin', (t == :collection_object ? 'feedback-primary' : 'feedback-warning') ]) if i content_tag(:span, 'no identifier assigned', class: [:feedback, 'feedback-thin', 'feedback-warning']) end |
#collection_object_link(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 53 def collection_object_link(collection_object) return nil if collection_object.nil? link_to(collection_object_tag(collection_object).html_safe, collection_object.) end |
#collection_object_loan_tag(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 125 def collection_object_loan_tag(collection_object) return nil if collection_object.nil? || !collection_object.on_loan? msg = ['On Loan until', collection_object.loan_return_date].compact.join(' ') content_tag(:span, msg, class: [ :feedback, 'feedback-thin', 'feedback-warning' ]).html_safe end |
#collection_object_metadata_badge(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 226 def (collection_object) return nil if collection_object.nil? o = collection_object layout = Waxy::Geometry::Layout.new( Waxy::Geometry::Orientation::LAYOUT_POINTY, Waxy::Geometry::Point.new(14,14), # size Waxy::Geometry::Point.new(14,14), # start 0 # padding ) s = [ (o.identifiers.any? ? 1 : 0), (o.taxon_determinations.any? ? 1 : 0), (o.collecting_event&.map_center.nil? ? 0 : 1), (o.collecting_event_id ? 1 : 0), (o.buffered_determinations.blank? ? 0 : 1), (o.buffered_collecting_event.blank? ? 0 : 1), ] a = Waxy::Meta.new a.size = s a.stroke = 'grey' a.link_title = "#{o.id} created #{time_ago_in_words(o.created_at)} ago by #{user_tag(o.creator)}" c = Waxy::Render::Svg::Canvas.new(28, 28) c.body << Waxy::Render::Svg.rectangle(layout, [a], 0) c.to_svg end |
#collection_object_preparation_by_classification(scope = nil) ⇒ Object
Perhaps a /lib/catalog method
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# File 'app/helpers/collection_objects_helper.rb', line 319 def collection_object_preparation_by_classification(scope = nil) return [] if scope.nil? data = {} no_data = {} preparations = ::PreparationType.joins(:collection_objects).where(collection_objects: {project_id: sessions_current_project_id}).distinct i = 0 scope.each do |n| j = [] a = ::Queries::CollectionObject::Filter.new( project_id: sessions_current_project_id, taxon_name_id: n.id, descendants: true ) # Yes a custom query could do this much faster preparations.each do |p| a.preparation_type_id = p.id t = CollectionObject.where(id: a.all).calculate(:sum, :total) if t > 0 j.push [p.name, t] i += 1 end end if j.empty? # There are no data at all, don't query for Missing no_data[n.id] = n.cached else a.preparation_type_id = nil a.preparation_type = false w = CollectionObject.where(id: a.all).calculate(:sum, :total) if w > 0 j.push ['Missing', w] end data[n.cached] = j end end return { labels: preparations.collect{|p| p.name} + ['Missing'], data:, no_data: } end |
#collection_object_radial_tag(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 58 def collection_object_radial_tag(collection_object) content_tag(:span, '', data: { 'global-id' => collection_object.to_global_id.to_s, 'collection-object-radial' => 'true'}) end |
#collection_object_scientific_name(collection_object) ⇒ Object
Text only, taxon name cached or OTU name for the most recent determination
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# File 'app/helpers/collection_objects_helper.rb', line 81 def collection_object_scientific_name(collection_object) return nil if collection_object.nil? if a = collection_object.taxon_determinations.order(:position)&.first if a.otu.taxon_name a.otu.taxon_name.cached else a.otu.name end else nil end end |
#collection_object_tag(collection_object) ⇒ Object
Return [String, nil]
a descriptor including the identifier and determination
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# File 'app/helpers/collection_objects_helper.rb', line 31 def collection_object_tag(collection_object) return nil if collection_object.nil? a = [ collection_object_loan_tag(collection_object), collection_object_deaccession_tag(collection_object), collection_object_identifier_tag(collection_object), taxon_determination_tag(collection_object.taxon_determinations.order(:position).first) ].compact if a.empty? a << [ collection_object.buffered_collecting_event, collection_object.buffered_determinations, collection_object.buffered_other_labels ].compact end a << "[#{collection_object.type[(0..2)].capitalize}]" a.join(' ').html_safe end |
#collection_object_taxon_determination_tag(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 153 def collection_object_taxon_determination_tag(collection_object) return nil if collection_object.nil? i = taxon_determination_tag(collection_object.taxon_determinations.order(:position).first) return content_tag(:span, i, class: [:feedback, 'feedback-thin', 'feedback-secondary']) if i nil end |
#collection_object_to_geo_json_feature(collection_object, base = true) ⇒ GeoJSON feature?
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# File 'app/helpers/collection_objects_helper.rb', line 259 def collection_object_to_geo_json_feature(collection_object, base = true) return nil if collection_object.nil? if a = collecting_event_to_geo_json_feature(collection_object.collecting_event) l = label_for_collection_object(collection_object) a['properties']['target'] = { 'type' => 'CollectionObject', 'id' => collection_object.id, 'label' => l } if base a['properties']['base'] = { 'type' => 'CollectionObject', 'id' => collection_object.id, 'label' => l} end a else nil end end |
#collection_object_visualized_identifier(collection_object) ⇒ Array [Identifier, String (type)]?
Returns also checks virtual container for identifier by proxy.
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# File 'app/helpers/collection_objects_helper.rb', line 138 def collection_object_visualized_identifier(collection_object) return nil if collection_object.nil? # Get the Identifier::Local::Catalog number on collection_object, or immediate containing Container i = collection_object.preferred_catalog_number # see delegation in collection_object.rb # Get some other identifier on collection_object i ||= collection_object.identifiers.order(:position)&.first return [:collection_object, identifier_tag(i)] if i # Get some other identifier on container j = collection_object&.container&.identifiers&.first return [:container, identifier_tag(j)] if j nil end |
#collection_objects_search_form ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 94 def collection_objects_search_form render('/collection_objects/quick_search_form') end |
#dwc_occurrence_table_body_tag(collection_objects) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 166 def dwc_occurrence_table_body_tag(collection_objects) collection_objects.collect do |c| dwc_occurrence_table_row_stub(c).html_safe end.join.html_safe end |
#dwc_occurrence_table_header_tag ⇒ Object
TODO: Isolate into own helper TODO: syncronize with class methods
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# File 'app/helpers/collection_objects_helper.rb', line 162 def dwc_occurrence_table_header_tag content_tag(:tr, CollectionObject::DwcExtensions::DWC_OCCURRENCE_MAP.keys.collect{|k| content_tag(:th, k)}.join.html_safe, class: [:error]) end |
#dwc_occurrence_table_row_stub(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 179 def dwc_occurrence_table_row_stub(collection_object) r = collection_object.dwc_occurrence if r dwc_occurrence_table_row_tag(r) else id = collection_object.to_param content_tag(:tr, nil, id: "dwc_row_stub_#{id}", data: {'collection-object-id': id}, class: 'dwc_row_stub' ) end end |
#dwc_occurrence_table_row_tag(dwc_occurrence) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 189 def dwc_occurrence_table_row_tag(dwc_occurrence) o = (dwc_occurrence.dwc_occurrence_object) content_tag(:tr, class: :contextMenuCells) do [CollectionObject::DwcExtensions::DWC_OCCURRENCE_MAP.keys.collect{|k| content_tag(:td, dwc_occurrence.send(k))}.join, fancy_show_tag(o), fancy_edit_tag(o) ].join.html_safe end end |
#dwc_table(collection_objects) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 172 def dwc_table(collection_objects) content_tag(:table) do dwc_occurrence_table_header_tag + dwc_occurrence_table_body_tag(collection_objects) end end |
#label_for_collection_object(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 62 def label_for_collection_object(collection_object) return nil if collection_object.nil? [ 'CollectionObject ' + collection_object.id.to_s, identifier_list_labels(collection_object) ].compact.join('; ') end |
#table_example(collection_objects) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 3 def table_example(collection_objects) cols = %i{ class order family genus scientificName sex } tag.table do tag.tr { cols.collect{|h| tag.th(h.to_s) }.join.html_safe } + collection_objects.collect{|co| tag.tr do (tag.td( co.dwc_class) + tag.td( co.dwc_order) + tag.td( co.dwc_family) + tag.td( co.dwc_genus) + tag.td( co.dwc_scientific_name) + tag.td( co.dwc_sex)).html_safe end }.join.html_safe end.html_safe end |
#verify_accessions_task_link(collection_object) ⇒ Object
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# File 'app/helpers/collection_objects_helper.rb', line 98 def verify_accessions_task_link(collection_object) priority = [collection_object.container, collection_object.identifiers.first, collection_object ].compact.first link_to('Verify', verify_accessions_task_path(by: priority..class.name.tableize.singularize.to_sym, id: priority.to_param)) end |