Method: Bio::MAFFT#initialize

Defined in:
lib/bio/appl/mafft.rb

#initialize(program = 'mafft', opt = []) ⇒ MAFFT

Creates a new alignment factory. program is the name of the program. opt is options of the program.



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# File 'lib/bio/appl/mafft.rb', line 108

def initialize(program = 'mafft', opt = [])
  @program = program
  @options = opt
  @command = nil
  @output = nil
  @report = nil
  @data_stdout = nil
  @exit_status = nil
end