Module: Transrate

Defined in:

lib/transrate.rb,
lib/transrate/cmd.rb,
lib/transrate/contig.rb,
lib/transrate/metric.rb,
lib/transrate/writer.rb,
lib/transrate/bowtie2.rb,
lib/transrate/version.rb,
lib/transrate/assembly.rb,
lib/transrate/samtools.rb,
lib/transrate/transrater.rb,
lib/transrate/read_metrics.rb,
lib/transrate/contig_metrics.rb,
lib/transrate/dimension_reduce.rb,
lib/transrate/comparative_metrics.rb,
ext/transrate/transrate.c

Overview

Transrate is a comprehensive transcriptome assembly quality assessment tool.

Defined Under Namespace

Modules: VERSION Classes: Assembly, Bowtie2, Bowtie2Error, Cmd, ComparativeMetrics, Contig, ContigMetrics, DimensionReduce, Metric, ReadMetrics, Samtools, Transrater, Writer