Class: Toccatore::OrcidUpdate

Inherits:
Base
  • Object
show all
Defined in:
lib/toccatore/orcid_update.rb

Instance Method Summary collapse

Methods inherited from Base

#cleanup_author, #get_authors, #get_data, #get_doi_ra, #get_hashed_authors, #get_name_identifier, #get_one_author, #get_one_hashed_author, #get_query_url, #get_total, #is_personal_name?, #job_batch_size, #name_detector, #normalize_doi, #orcid_as_url, #orcid_from_url, #process_data, #queue_jobs, #timeout, #unfreeze, #url, #validate_doi, #validate_orcid, #validate_prefix

Instance Method Details

#parse_data(result, options = {}) ⇒ Object



13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
# File 'lib/toccatore/orcid_update.rb', line 13

def parse_data(result, options={})
  return result.body.fetch("errors") if result.body.fetch("errors", nil).present?

  items = result.body.fetch("data", {}).fetch('response', {}).fetch('docs', nil)
  claim_action = options[:claim_action].presence || "create"

  Array(items).reduce([]) do |sum, item|
    doi = item.fetch("doi")
    related_identifiers = item.fetch("relatedIdentifier", [])
    skip_doi = related_identifiers.any? do |related_identifier|
      ["IsIdenticalTo", "IsPartOf", "IsPreviousVersionOf"].include?(related_identifier.split(':', 3).first)
    end
    name_identifiers = item.fetch("nameIdentifier", [])

    if name_identifiers.blank? || (skip_doi && claim_action == "create") || (!skip_doi && claim_action == "delete")
      sum
    else
      name_identifiers.each do |name_identifier|
        orcid = name_identifier.split(':', 2).last
        orcid = validate_orcid(orcid)

        next if orcid.blank?

        sum << { "orcid" => orcid,
                 "doi" => doi,
                 "source_id" => source_id,
                 "claim_action"=> claim_action }
      end
      sum
    end
  end
end

#push_data(items, options = {}) ⇒ Object

push to Volpino API if no error and we have collected works



47
48
49
50
51
52
53
54
55
# File 'lib/toccatore/orcid_update.rb', line 47

def push_data(items, options={})
  if items.empty?
    puts "No works found for date range #{options[:from_date]} - #{options[:until_date]}."
  elsif options[:access_token].blank?
    puts "An error occured: Access token missing."
  else
    Array(items).each { |item| push_item(item, options) }
  end
end

#push_item(item, options = {}) ⇒ Object



57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
# File 'lib/toccatore/orcid_update.rb', line 57

def push_item(item, options={})
  return OpenStruct.new(body: { "errors" => [{ "title" => "Access token missing." }] }) if options[:access_token].blank?

  push_url = (options[:push_url].presence || "https://profiles.datacite.org/api") + "/claims"

  response = Maremma.post(push_url, data: { "claim" => item }.to_json,
                                    token: options[:access_token],
                                    content_type: 'json')
  if response.body["data"].present?
    doi = response.body.fetch("data", {}).fetch("attributes", {}).fetch("doi", nil)
    orcid = response.body.fetch("data", {}).fetch("attributes", {}).fetch("orcid", nil)
    claim_action = response.body.fetch("data", {}).fetch("attributes", {}).fetch("claim-action", nil)
    puts "#{claim_action.titleize} DOI #{doi} for ORCID ID #{orcid} pushed to Profiles service."
  elsif response.body["errors"].present?
    puts "An error occured: #{response.body['errors'].first['title']}"
  end
end

#queryObject



9
10
11
# File 'lib/toccatore/orcid_update.rb', line 9

def query
  "nameIdentifier:ORCID\\:*"
end

#source_idObject



5
6
7
# File 'lib/toccatore/orcid_update.rb', line 5

def source_id
  "orcid_update"
end