Class: Toccatore::DataciteRelated

Inherits:
Base
  • Object
show all
Defined in:
lib/toccatore/datacite_related.rb

Instance Method Summary collapse

Methods inherited from Base

#cleanup_author, #get_authors, #get_data, #get_doi_ra, #get_hashed_authors, #get_name_identifier, #get_one_author, #get_one_hashed_author, #get_query_url, #get_total, #is_personal_name?, #job_batch_size, #name_detector, #normalize_doi, #orcid_as_url, #orcid_from_url, #process_data, #push_data, #queue_jobs, #timeout, #unfreeze, #url, #validate_doi, #validate_orcid, #validate_prefix

Instance Method Details

#parse_data(result, options = {}) ⇒ Object



13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
# File 'lib/toccatore/datacite_related.rb', line 13

def parse_data(result, options={})
  return result.body.fetch("errors") if result.body.fetch("errors", nil).present?

  items = result.body.fetch("data", {}).fetch('response', {}).fetch('docs', nil)
  registration_agencies = {}

  Array.wrap(items).reduce([]) do |sum, item|
    doi = item.fetch("doi")
    pid = normalize_doi(doi)
    related_doi_identifiers = item.fetch('relatedIdentifier', []).select { |id| id =~ /:DOI:.+/ }

    # don't generate event if there is a DOI for identical content with same prefix
    skip_doi = related_doi_identifiers.any? do |related_identifier|
      ["IsIdenticalTo"].include?(related_identifier.split(':', 3).first) &&
      related_identifier.split(':', 3).last.to_s.starts_with?(validate_prefix(doi))
    end

    unless skip_doi
      sum += Array(related_doi_identifiers).reduce([]) do |ssum, iitem|
        raw_relation_type, _related_identifier_type, related_identifier = iitem.split(':', 3)
        related_identifier = related_identifier.strip.downcase
        prefix = validate_prefix(related_identifier)
        registration_agencies[prefix] = get_doi_ra(prefix) unless registration_agencies[prefix]

        # check whether this is a DataCite DOI
        if registration_agencies[prefix] == "DataCite"
          ssum
        else
          ssum << { "id" => SecureRandom.uuid,
                    "message_action" => "create",
                    "subj_id" => pid,
                    "obj_id" => normalize_doi(related_identifier),
                    "relation_type_id" => raw_relation_type.underscore,
                    "source_id" => "datacite",
                    "source_token" => options[:source_token],
                    "occurred_at" => item.fetch("minted") }
        end
      end
    end

    sum
  end
end

#push_item(item, options = {}) ⇒ Object



57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
# File 'lib/toccatore/datacite_related.rb', line 57

def push_item(item, options={})
  return OpenStruct.new(body: { "errors" => [{ "title" => "Access token missing." }] }) if options[:access_token].blank?

  host = options[:push_url].presence || "https://bus.eventdata.crossref.org"
  push_url = host + "/events"

  if options[:jsonapi]
    data = { "data" => {
               "id" => item["id"],
               "type" => "events",
               "attributes" => item.except("id") }}
    response = Maremma.post(push_url, data: data.to_json,
                                      token: options[:access_token],
                                      content_type: 'json',
                                      host: host)
  else
    response = Maremma.post(push_url, data: item.to_json,
                                      bearer: options[:access_token],
                                      content_type: 'json',
                                      host: host)
  end

  if response.status == 201
    puts "#{item['subj_id']} #{item['relation_type_id']} #{item['obj_id']} pushed to Event Data service."
  elsif response.body["errors"].present?
    puts "An error occured: #{response.body['errors'].first['title']}"
  end
end

#queryObject



9
10
11
# File 'lib/toccatore/datacite_related.rb', line 9

def query
  "relatedIdentifier:DOI\\:*"
end

#source_idObject



5
6
7
# File 'lib/toccatore/datacite_related.rb', line 5

def source_id
  "datacite_related"
end