Class: String

Inherits:
Object
  • Object
show all
Defined in:
lib/protk/psm.rb,
lib/protk/tandem_search_tool.rb

Instance Method Summary collapse

Instance Method Details

#to_bool ⇒ Object

Raises:

  • (ArgumentError) 


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# File 'lib/protk/psm.rb', line 9

def to_bool
  return true if self == true || self =~ (/^(true|t|yes|y|1)$/i)
  return false if self == false || self =~ (/^(false|f|no|n|0)$/i)
  raise ArgumentError.new("invalid value for Boolean: \"#{self}\"")
end

#xtandem_modification_motif? ⇒ Boolean

Returns:

  • (Boolean) 


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# File 'lib/protk/tandem_search_tool.rb', line 5

def xtandem_modification_motif?
# 124@[ is not a modification motif, it is a residue (N-term) modification,
# so when checking if modification is a motif look for paired square brackets.
ismotif=false
case self
when /[\(\)\{\}\!]/,/\[.*\]/
	ismotif=true
end
ismotif
end