Class: OpenTox::Algorithm::Generic

Inherits:
Object
  • Object
show all
Includes:
OpenTox::Algorithm
Defined in:
lib/algorithm.rb

Overview

Generic Algorithm class, should work with all OpenTox webservices

Instance Attribute Summary

Attributes included from OpenTox

#metadata, #uri

Class Method Summary collapse

Methods included from OpenTox::Algorithm

effect, gauss, get_cdk_descriptors, get_jl_descriptors, get_ob_descriptors, isnull_or_singular?, load_ds_csv, min_frequency, numeric?, pc_descriptors, #run, sum_size, #to_rdfxml, zero_variance?

Methods included from OpenTox

#add_metadata, all, #delete, #initialize, #load_metadata, sign_in, text_to_html, #to_rdfxml

Class Method Details

.find(uri, subjectid = nil) ⇒ OpenTox::Algorithm::Generic

Find Generic Opentox Algorithm via URI, and loads metadata, could raise NotFound/NotAuthorized error

Parameters:

  • uri (String) —

    Algorithm URI

Returns:



42
43
44
45
46
47
48
 
# File 'lib/algorithm.rb', line 42

def self.find(uri, subjectid=nil)
  return nil unless uri
  alg = Generic.new(uri)
  alg.load_metadata( subjectid )
  raise "cannot load algorithm metadata" if alg.metadata==nil or alg.metadata.size==0
  alg
end