Class: OpenBEL::Routes::Expressions
- Includes:
- BELParser::Parsers
- Defined in:
- app/openbel/api/routes/expressions.rb
Constant Summary
Constants inherited from Base
Base::DEFAULT_CONTENT_TYPE, Base::DEFAULT_CONTENT_TYPE_ID, Base::RESOURCE_SERIALIZERS, Base::SCHEMA_BASE_URL, Base::SPOKEN_CONTENT_TYPES
Constants included from Schemas
Schemas::COMPILED_SCHEMAS, Schemas::SCHEMA_DIR, Schemas::SUFFIX
Constants included from OpenBEL::Resource::Namespaces
OpenBEL::Resource::Namespaces::VOCABULARY_RDF
Constants included from OpenBEL::Resource::Annotations
OpenBEL::Resource::Annotations::VOCABULARY_RDF
Instance Method Summary collapse
-
#initialize(app) ⇒ Expressions
constructor
A new instance of Expressions.
Methods included from Schemas
Constructor Details
#initialize(app) ⇒ Expressions
Returns a new instance of Expressions.
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# File 'app/openbel/api/routes/expressions.rb', line 22 def initialize(app) super # Obtain configured BEL version. bel_version = OpenBEL::Settings[:bel][:version] @spec = BELParser::Language.specification(bel_version) # RdfRepository using Jena. tdb = OpenBEL::Settings[:resource_rdf][:jena][:tdb_directory] @rr = BEL::RdfRepository.plugins[:jena].create_repository(:tdb_directory => tdb) # Annotations using RdfRepository @annotations = BEL::Resource::Annotations.new(@rr) # Namespaces using RdfRepository @namespaces = BEL::Resource::Namespaces.new(@rr) @supported_namespaces = Hash[ @namespaces.each.map { |ns| prefix = ns.prefix.first.upcase [ prefix, BELParser::Expression::Model::Namespace.new( prefix, ns.uri ) ] } ] # Resource Search using SQLite. @search = BEL::Resource::Search.plugins[:sqlite].create_search( :database_file => OpenBEL::Settings[:resource_search][:sqlite][:database_file] ) @expression_validator = BELParser::Expression::Validator.new( @spec, @supported_namespaces, BELParser::Resource::JenaTDBReader.new(tdb), BELParser::Resource.default_url_reader) end |