Method: Bio::Alignment::FactoryTemplate::Simple#query_alignment

Defined in:
lib/bio/alignment.rb

#query_alignment(seqs) ⇒ Object

Performs alignment for seqs. seqs should be Bio::Alignment or Array of sequences or nil.



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# File 'lib/bio/alignment.rb', line 2282

def query_alignment(seqs)
  unless seqs.respond_to?(:output_fasta) then
    seqs = Bio::Alignment.new(seqs)
  end
  query_string(seqs.output_fasta(:width => 70))
end