Module: Labimotion::GenericHelpers

Extended by:
Grape::API::Helpers
Defined in:
lib/labimotion/helpers/generic_helpers.rb

Overview

Generic Helpers

Instance Method Summary collapse

Instance Method Details

#authenticate_admin!(type) ⇒ Object



10
11
12
# File 'lib/labimotion/helpers/generic_helpers.rb', line 10

def authenticate_admin!(type)
  error!('401 Unauthorized', 401) unless current_user.generic_admin[type]
end

#create_attachments(files, del_files, type, id, identifier, user_id) ⇒ Object



191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
# File 'lib/labimotion/helpers/generic_helpers.rb', line 191

def create_attachments(files, del_files, type, id, identifier, user_id)
  attach_ary = []
  (files || []).each_with_index do |file, index|
    next unless (tempfile = file[:tempfile])

    att = Attachment.new(
      bucket: file[:container_id],
      filename: file[:filename],
      con_state: Labimotion::ConState::NONE,
      file_path: file[:tempfile],
      created_by: user_id,
      created_for: user_id,
      identifier: identifier[index],
      content_type: file[:type],
      attachable_type: type,
      attachable_id: id,
    )
    begin
      att.save!
      attach_ary.push(att.id)
    ensure
      tempfile.close
      tempfile.unlink
    end
  end
  unless (del_files || []).empty?
    Attachment.where('id IN (?) AND attachable_type = (?)', del_files.map!(&:to_i), type).update_all(attachable_id: nil)
  end
  attach_ary
rescue StandardError => e
  Labimotion.log_exception(e)
  raise e
end

#create_uploads(type, id, files, param_info, user_id) ⇒ Object



138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
# File 'lib/labimotion/helpers/generic_helpers.rb', line 138

def create_uploads(type, id, files, param_info, user_id)
  return if files.nil? || param_info.nil? || files.empty? || param_info.empty?

  attach_ary = []
  map_info = JSON.parse(param_info)
  map_info&.keys&.each do |key|
    next if map_info[key]['files'].empty?

    if type == 'Segment'
      element = Labimotion::Segment.find_by(element_id: id, segment_klass_id: key)
    elsif type == 'Element'
      element = Labimotion::Element.find_by(id: id)
    end
    next if element.nil?

    uploads = fetch_properties_uploads(element.properties)

    map_info[key]['files'].each do |fobj|
      file = (files || []).select { |ff| ff['filename'] == fobj['uid'] }&.first
      pa = uploads.select { |ss| ss[:uid] == file[:filename] }&.first || nil
      next unless (tempfile = file[:tempfile])

      a = Attachment.new(
        bucket: file[:container_id],
        filename: fobj['filename'],
        con_state: Labimotion::ConState::NONE,
        file_path: file[:tempfile],
        created_by: user_id,
        created_for: user_id,
        content_type: file[:type],
        attachable_type: map_info[key]['type'],
        attachable_id: element.id,
      )
      begin
        a.save!

        update_properties_upload(element, element.properties, a, pa)
        attach_ary.push(a.id)
      ensure
        tempfile.close
        tempfile.unlink
      end
    end
    element.send("#{type.downcase}s_revisions")&.last&.destroy!
    element.save!
  end
  attach_ary
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  error!('Error while uploading files.', 500)
  raise e
end

#deactivate_klass(params) ⇒ Object



23
24
25
26
27
28
29
30
31
# File 'lib/labimotion/helpers/generic_helpers.rb', line 23

def deactivate_klass(params)
  klz = fetch_klass(params[:klass], params[:id])
  klz&.update!(is_active: params[:is_active])
  generate_klass_file unless klz.class.name != 'ElementKlass'
  klz
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#delete_klass(params) ⇒ Object



33
34
35
36
37
38
39
40
41
42
# File 'lib/labimotion/helpers/generic_helpers.rb', line 33

def delete_klass(params)
  authenticate_admin!(params[:klass].gsub(/(Klass)/, 's').downcase)
  klz = fetch_klass(params[:klass], params[:id])
  klz&.destroy!
  generate_klass_file unless klz.class.name != 'ElementKlass'
  status 201
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#delete_klass_revision(params) ⇒ Object



66
67
68
69
70
71
72
73
74
75
# File 'lib/labimotion/helpers/generic_helpers.rb', line 66

def delete_klass_revision(params)
  revision = "Labimotion::#{params[:klass]}esRevision".constantize.find(params[:id])
  klass = "Labimotion::#{params[:klass]}".constantize.find_by(id: params[:klass_id]) unless revision.nil?
  error!('Revision is invalid.', 404) if revision.nil?
  error!('Can not delete the active revision.', 405) if revision.uuid == klass.uuid
  revision&.destroy!
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#delete_revision(params) ⇒ Object



77
78
79
80
81
82
83
84
85
86
# File 'lib/labimotion/helpers/generic_helpers.rb', line 77

def delete_revision(params)
  revision = "Labimotion::#{params[:klass]}sRevision".constantize.find(params[:id])
  element = "Labimotion::#{params[:klass]}".constantize.find_by(id: params[:element_id]) unless revision.nil?
  error!('Revision is invalid.', 404) if revision.nil?
  error!('Can not delete the active revision.', 405) if revision.uuid == element.uuid
  revision&.destroy!
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#fetch_klass(name, id) ⇒ Object



14
15
16
17
18
19
20
21
# File 'lib/labimotion/helpers/generic_helpers.rb', line 14

def fetch_klass(name, id)
  klz = "Labimotion::#{name}".constantize.find_by(id: id)
  error!("#{name.gsub(/(Klass)/, '')} is invalid. Please re-select.", 500) if klz.nil?
  klz
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#fetch_properties_uploads(properties) ⇒ Object



108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
# File 'lib/labimotion/helpers/generic_helpers.rb', line 108

def fetch_properties_uploads(properties)
  uploads = []
  properties['layers'].keys.each do |key|
    layer = properties['layers'][key]
    field_uploads = layer['fields'].select { |ss| ss['type'] == 'upload' }
    field_uploads.each do |field|
      ((field['value'] && field['value']['files']) || []).each do |file|
        uploads.push({ layer: key, field: field['field'], uid: file['uid'], filename: file['filename'] })
      end
    end
  end
  uploads
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#fetch_repo(name, current_user) ⇒ Object



233
234
235
236
237
238
239
240
241
242
243
244
245
246
# File 'lib/labimotion/helpers/generic_helpers.rb', line 233

def fetch_repo(name, current_user)
  # current_klasses = "Labimotion::#{name}".constantize.where.not(identifier: nil)&.pluck(:identifier) || []
  response = Labimotion::TemplateHub.list(name)
  # if response && response['list'].present? && response['list'].length.positive?
    # filter_list = response['list']&.reject do |ds|
    #   current_klasses.include?(ds['identifier'])
    # end || []
  # end
  # filter_list || []
  (response && response['list']) || []
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  { error: 'Cannot connect to Chemotion Repository' }
end

#fetch_repo_generic_template(klass, identifier) ⇒ Object



225
226
227
# File 'lib/labimotion/helpers/generic_helpers.rb', line 225

def fetch_repo_generic_template(klass, identifier)
  Chemotion::Generic::Fetch::Template.exec(API::TARGET, klass, identifier)
end

#fetch_repo_generic_template_list(name = false) ⇒ Object



229
230
231
# File 'lib/labimotion/helpers/generic_helpers.rb', line 229

def fetch_repo_generic_template_list(name = false)
  Chemotion::Generic::Fetch::Template.list(API::TARGET, name)
end

#generate_klass_fileObject



99
100
101
102
103
104
105
106
# File 'lib/labimotion/helpers/generic_helpers.rb', line 99

def generate_klass_file
  klass_names_file = Rails.root.join('app/packs/klasses.json')
  klasses = Labimotion::ElementKlass.where(is_active: true)&.pluck(:name) || []
  File.write(klass_names_file, klasses)
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#list_klass_revisions(params) ⇒ Object



88
89
90
91
92
93
94
95
# File 'lib/labimotion/helpers/generic_helpers.rb', line 88

def list_klass_revisions(params)
  klass = "Labimotion::#{params[:klass]}".constantize.find_by(id: params[:id])
  list = klass.send("#{params[:klass].underscore}es_revisions") unless klass.nil?
  list&.order(released_at: :desc)&.limit(10)
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#update_properties_upload(element, properties, att, pa) ⇒ Object



125
126
127
128
129
130
131
132
133
134
135
136
# File 'lib/labimotion/helpers/generic_helpers.rb', line 125

def update_properties_upload(element, properties, att, pa)
  return if pa.nil?

  idx = properties['layers'][pa[:layer]]['fields'].index { |fl| fl['field'] == pa[:field] }
  fidx = properties['layers'][pa[:layer]]['fields'][idx]['value']['files'].index { |fi| fi['uid'] == pa[:uid] }
  properties['layers'][pa[:layer]]['fields'][idx]['value']['files'][fidx]['aid'] = att.id
  properties['layers'][pa[:layer]]['fields'][idx]['value']['files'][fidx]['uid'] = att.identifier
  element.update_columns(properties: properties)
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end

#update_template(params, current_user) ⇒ Object



44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
# File 'lib/labimotion/helpers/generic_helpers.rb', line 44

def update_template(params, current_user)
  klz = fetch_klass(params[:klass], params[:id])
  uuid = SecureRandom.uuid
  properties = params[:properties_template]
  properties['uuid'] = uuid
  klz.version = Labimotion::Utils.next_version(params[:release], klz.version)
  properties['version'] = klz.version
  properties['pkg'] = Labimotion::Utils.pkg(params['pkg'] || (klz.properties_template && klz.properties_template['pkg']))
  properties['klass'] = klz.class.name.split('::').last
  properties['identifier'] = klz.identifier
  properties.delete('eln') if properties['eln'].present?
  klz.updated_by = current_user.id
  klz.properties_template = properties
  klz.save!
  klz.reload
  klz.create_klasses_revision(current_user) if params[:release] != 'draft'
  klz
rescue StandardError => e
  Labimotion.log_exception(e, current_user)
  raise e
end