Module: Inferno::DSL::InputOutputHandling

Defined in:
lib/inferno/dsl/input_output_handling.rb

Instance Method Summary collapse

Instance Method Details

#all_outputsObject



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# File 'lib/inferno/dsl/input_output_handling.rb', line 148

def all_outputs
  outputs
    .map { |output_identifier| config.output_name(output_identifier) }
    .concat(all_children.flat_map(&:all_outputs))
    .uniq
end

#available_inputs(selected_suite_options = nil) ⇒ Object

Inputs available for the user for this runnable and all its children.



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# File 'lib/inferno/dsl/input_output_handling.rb', line 184

def available_inputs(selected_suite_options = nil)
  available_inputs =
    config.inputs
      .slice(*inputs)
      .each_with_object({}) do |(_, input), inputs|
        inputs[input.name.to_sym] = Entities::Input.new(**input.to_hash)
      end

  available_inputs.each do |input, current_definition|
    child_definition = children_available_inputs(selected_suite_options)[input]
    current_definition.merge_with_child(child_definition)
  end

  available_inputs = children_available_inputs(selected_suite_options).merge(available_inputs)

  order_available_inputs(available_inputs)
end

#children_available_inputs(selected_suite_options = nil) ⇒ Object

Inputs available for this runnable’s children. A running list of outputs created by the children is used to exclude any inputs which are provided by an earlier child’s output.



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# File 'lib/inferno/dsl/input_output_handling.rb', line 159

def children_available_inputs(selected_suite_options = nil)
  child_outputs = []
  children(selected_suite_options).each_with_object({}) do |child, definitions|
    new_definitions = child.available_inputs(selected_suite_options).map(&:dup)
    new_definitions.each do |input, new_definition|
      existing_definition = definitions[input]

      updated_definition =
        if existing_definition.present?
          existing_definition.merge_with_child(new_definition)
        else
          new_definition
        end

      next if child_outputs.include?(updated_definition.name.to_sym)

      definitions[updated_definition.name.to_sym] = updated_definition
    end

    child_outputs.concat(child.all_outputs).uniq!
  end
end

#input(identifier, *other_identifiers, **input_params) ⇒ void

This method returns an undefined value.

Define inputs

Examples:

input :patient_id, title: 'Patient ID', description: 'The ID of the patient being searched for',
                  default: 'default_patient_id'
input :textarea, title: 'Textarea Input Example', type: 'textarea', optional: true

Options Hash (**input_params):

  • :title (String)

    Human readable title for input

  • :description (String)

    Description for the input

  • :type (String)

    text | textarea | radio | checkbox | oauth_credentials

  • :default (String)

    The default value for the input

  • :optional (Boolean)

    Set to true to not require input for test execution

  • :locked (Boolean)

    If true, the user can not alter the value

  • :hidden (Boolean)

    If true, the input will not be visible to the user in the UI

  • :options (Hash)

    Possible input option formats based on input type



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# File 'lib/inferno/dsl/input_output_handling.rb', line 25

def input(identifier, *other_identifiers, **input_params)
  if other_identifiers.present?
    [identifier, *other_identifiers].compact.each do |input_identifier|
      inputs << input_identifier
      config.add_input(input_identifier)
      children
        .reject { |child| child.inputs.include? input_identifier }
        .each do |child|
          child.input(input_identifier)
        end
    end
  else
    inputs << identifier
    config.add_input(identifier, input_params)
    children
      .reject { |child| child.inputs.include? identifier }
      .each do |child|
        child.input(identifier, **input_params)
      end
  end
end

#input_order(*new_input_order) ⇒ Array<String, Symbol>

Define a particular order for inputs to be presented in the API/UI

Examples:

group do
  input :input1, :input2, :input3
  input_order :input3, :input2, :input1
end


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# File 'lib/inferno/dsl/input_output_handling.rb', line 117

def input_order(*new_input_order)
  return @input_order = new_input_order if new_input_order.present?

  @input_order ||= []
end

#inputsObject



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# File 'lib/inferno/dsl/input_output_handling.rb', line 81

def inputs
  @inputs ||= []
end

#missing_inputs(submitted_inputs, selected_suite_options) ⇒ Object



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# File 'lib/inferno/dsl/input_output_handling.rb', line 103

def missing_inputs(, selected_suite_options)
   = [] if .nil?

  required_inputs(selected_suite_options).map(&:to_s) - .map { |input| input[:name] }
end

#order_available_inputs(original_inputs) ⇒ Object



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# File 'lib/inferno/dsl/input_output_handling.rb', line 124

def order_available_inputs(original_inputs)
  input_names = original_inputs.map { |_, input| input.name }.join(', ')

  ordered_inputs =
    input_order.each_with_object({}) do |input_name, inputs|
      key, input = original_inputs.find { |_, input| input.name == input_name.to_s }
      if input.nil?
        Inferno::Application[:logger].error <<~ERROR
          Error trying to order inputs in #{id}: #{title}:
          - Unable to find input #{input_name} in available inputs: #{input_names}
        ERROR
        next
      end
      inputs[key] = original_inputs.delete(key)
    end

  original_inputs.each do |key, input|
    ordered_inputs[key] = input
  end

  ordered_inputs
end

#output(identifier, *other_identifiers, **output_definition) ⇒ void

This method returns an undefined value.

Define outputs

Examples:

output :patient_id, :condition_id, :observation_id
output :oauth_credentials, type: 'oauth_credentials'

Options Hash (**output_definition):

  • :type (String)

    text, textarea, or oauth_credentials



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# File 'lib/inferno/dsl/input_output_handling.rb', line 58

def output(identifier, *other_identifiers, **output_definition)
  if other_identifiers.present?
    [identifier, *other_identifiers].compact.each do |output_identifier|
      outputs << output_identifier
      config.add_output(output_identifier)
      children
        .reject { |child| child.outputs.include? output_identifier }
        .each do |child|
          child.output(output_identifier)
        end
    end
  else
    outputs << identifier
    config.add_output(identifier, output_definition)
    children
      .reject { |child| child.outputs.include? identifier }
      .each do |child|
        child.output(identifier, **output_definition)
      end
  end
end

#output_definitionsObject



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# File 'lib/inferno/dsl/input_output_handling.rb', line 91

def output_definitions
  config.outputs.slice(*outputs)
end

#outputsObject



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# File 'lib/inferno/dsl/input_output_handling.rb', line 86

def outputs
  @outputs ||= []
end

#required_inputs(selected_suite_options) ⇒ Object



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# File 'lib/inferno/dsl/input_output_handling.rb', line 96

def required_inputs(selected_suite_options)
  available_inputs(selected_suite_options)
    .reject { |_, input| input.optional }
    .map { |_, input| input.name }
end