Class: HTS::VCF::Header

Inherits:

Object

• Object
• HTS::VCF::Header

Defined in:

lib/hts/vcf/header.rb

Instance Attribute Summary

• #h ⇒ Object readonly

  Returns the value of attribute h.

Instance Method Summary

• #initialize(h) ⇒ Header constructor

  A new instance of Header.

• #seqs ⇒ Object

  FIXME: better name?.

• #text ⇒ Object

Constructor Details

#initialize(h) ⇒ Header

Returns a new instance of Header.

# File 'lib/hts/vcf/header.rb', line 8

def initialize(h)
  @h = h
end

Instance Attribute Details

#h ⇒ Object (readonly)

Returns the value of attribute h.

# File 'lib/hts/vcf/header.rb', line 6

def h
  @h
end

Instance Method Details

#seqs ⇒ Object

FIXME: better name?

# File 'lib/hts/vcf/header.rb', line 13

def seqs
  Array.new(@h[:n_targets]) do |i|
    FFI.sam_hdr_tid2name(@h, i)
  end
end

#text ⇒ Object

# File 'lib/hts/vcf/header.rb', line 19

def text
  FFI.sam_hdr_str(@h)
end