Class: Google::Apis::GenomicsV1::AnnotationSet

Inherits:
Object
  • Object
show all
Includes:
Core::Hashable, Core::JsonObjectSupport
Defined in:
generated/google/apis/genomics_v1/classes.rb,
generated/google/apis/genomics_v1/representations.rb,
generated/google/apis/genomics_v1/representations.rb

Overview

An annotation set is a logical grouping of annotations that share consistent type information and provenance. Examples of annotation sets include 'all genes from refseq', and 'all variant annotations from ClinVar'.

Instance Attribute Summary collapse

Instance Method Summary collapse

Methods included from Core::JsonObjectSupport

#to_json

Methods included from Core::Hashable

process_value, #to_h

Constructor Details

#initialize(**args) ⇒ AnnotationSet

Returns a new instance of AnnotationSet.


69
70
71
# File 'generated/google/apis/genomics_v1/classes.rb', line 69

def initialize(**args)
   update!(**args)
end

Instance Attribute Details

#dataset_idString

The dataset to which this annotation set belongs. Corresponds to the JSON property datasetId

Returns:

  • (String)

39
40
41
# File 'generated/google/apis/genomics_v1/classes.rb', line 39

def dataset_id
  @dataset_id
end

#idString

The server-generated annotation set ID, unique across all annotation sets. Corresponds to the JSON property id

Returns:

  • (String)

34
35
36
# File 'generated/google/apis/genomics_v1/classes.rb', line 34

def id
  @id
end

#infoHash<String,Array<Object>>

A map of additional read alignment information. This must be of the form map ( string key mapping to a list of string values). Corresponds to the JSON property info

Returns:

  • (Hash<String,Array<Object>>)

67
68
69
# File 'generated/google/apis/genomics_v1/classes.rb', line 67

def info
  @info
end

#nameString

The display name for this annotation set. Corresponds to the JSON property name

Returns:

  • (String)

50
51
52
# File 'generated/google/apis/genomics_v1/classes.rb', line 50

def name
  @name
end

#reference_set_idString

The ID of the reference set that defines the coordinate space for this set's annotations. Corresponds to the JSON property referenceSetId

Returns:

  • (String)

45
46
47
# File 'generated/google/apis/genomics_v1/classes.rb', line 45

def reference_set_id
  @reference_set_id
end

#source_uriString

The source URI describing the file from which this annotation set was generated, if any. Corresponds to the JSON property sourceUri

Returns:

  • (String)

56
57
58
# File 'generated/google/apis/genomics_v1/classes.rb', line 56

def source_uri
  @source_uri
end

#typeString

The type of annotations contained within this set. Corresponds to the JSON property type

Returns:

  • (String)

61
62
63
# File 'generated/google/apis/genomics_v1/classes.rb', line 61

def type
  @type
end

Instance Method Details

#update!(**args) ⇒ Object

Update properties of this object


74
75
76
77
78
79
80
81
82
# File 'generated/google/apis/genomics_v1/classes.rb', line 74

def update!(**args)
  @id = args[:id] if args.key?(:id)
  @dataset_id = args[:dataset_id] if args.key?(:dataset_id)
  @reference_set_id = args[:reference_set_id] if args.key?(:reference_set_id)
  @name = args[:name] if args.key?(:name)
  @source_uri = args[:source_uri] if args.key?(:source_uri)
  @type = args[:type] if args.key?(:type)
  @info = args[:info] if args.key?(:info)
end