Class: NumRu::NetCDFVar

Inherits:
Object
  • Object
show all
Defined in:
lib/numru/netcdf.rb,
lib/numru/netcdf_miss.rb,
ext/netcdfraw.c

Overview

NetCDFVar class $B$K4X$7$F(B

Constant Summary collapse

@@unpack_type =
nil

Class Method Summary collapse

Instance Method Summary collapse

Class Method Details

.new(file, varname, mode = "r", share = false) ⇒ Object Also known as: open



225
226
227
228
229
230
231
232
# File 'lib/numru/netcdf.rb', line 225

def new(file,varname,mode="r",share=false)
	  if(file.is_a?(String))
	     file = NetCDF.open(file,mode,share)
	  elsif(!file.is_a?(NetCDF))
	    raise TypeError, "1st arg must be a NetCDF (file object) or a String (path)"
	  end
	  file.var(varname)
end

.unpack_typeObject



331
332
333
# File 'lib/numru/netcdf.rb', line 331

def unpack_type
  @@unpack_type
end

.unpack_type=(na_type) ⇒ Object



334
335
336
337
338
339
340
341
# File 'lib/numru/netcdf.rb', line 334

def unpack_type=(na_type)
  if [NArray::BYTE, NArray::SINT, NArray::INT, 
	   NArray::SFLOAT, NArray::FLOAT, nil].include?(na_type)
	 @@unpack_type = na_type
  else
	 raise ArgumentError, "Arg must be one of NArray::BYTE, NArray::SINT, NArray::INT, NArray::SFLOAT, NArray::FLOAT"
  end
end

Instance Method Details

#==(Varb) ⇒ Object



1863
1864
1865
1866
1867
1868
1869
1870
1871
1872
1873
1874
1875
1876
1877
1878
1879
1880
1881
1882
# File 'ext/netcdfraw.c', line 1863

VALUE
NetCDF_var_eql(VALUE Vara,VALUE Varb)
{
  struct NetCDFVar *Netcdf_vara;
  struct NetCDFVar *Netcdf_varb;
  
  if( rb_obj_is_kind_of(Varb, cNetCDFVar) ){
      Data_Get_Struct(Vara,struct NetCDFVar,Netcdf_vara);
      Data_Get_Struct(Varb,struct NetCDFVar,Netcdf_varb);

      if(Netcdf_vara->ncid == Netcdf_varb->ncid && 
	 Netcdf_vara->varid == Netcdf_varb->varid){
	  return Qtrue;
      } else {
	  return Qfalse;
      }
  } else {
      return Qfalse;
  }
}

#[](*a) ⇒ Object



621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
# File 'lib/numru/netcdf.rb', line 621

def [](*a)
  if a.length == 0
    return self.get
  end
  a = __rubber_expansion(a)
  first = Array.new
  last = Array.new
  stride = Array.new
  set_stride = false
  a.each{|i|
    if(i.is_a?(Fixnum))
	 first.push(i)
	 last.push(i)
	 stride.push(1)
    elsif(i.is_a?(Range))
	 first.push(i.first)
	 last.push(i.exclude_end? ? i.last-1 : i.last)
	 stride.push(1)
    elsif(i.is_a?(Hash))
	 r = (i.to_a[0])[0]
      s = (i.to_a[0])[1]
      if ( !( r.is_a?(Range) ) || ! ( s.is_a?(Integer) ) )
  raise TypeError, "Hash argument must be {a_Range, step}"
	 end
	 first.push(r.first) 
	 last.push(r.exclude_end? ? r.last-1 : r.last)
	 stride.push(s)
	 set_stride = true
    elsif(i.is_a?(TrueClass))
	 first.push(0)
	 last.push(-1)
	 stride.push(1)
    elsif( i.is_a?(Array) || i.is_a?(NArray))
	 a_new = a.dup
	 at = a.index(i)
	 i = NArray.to_na(i) if i.is_a?(Array)
	 for n in 0..i.length-1
 a_new[at] = i[n]..i[n]
 na_tmp = self[*a_new]
 if n==0 then
   k = at
   if at > 0
     a[0..at-1].each{|x| if x.is_a?(Fixnum) then k -= 1 end}
   end
   shape_tmp = na_tmp.shape
   shape_tmp[k] = i.length
   na = na_tmp.class.new(na_tmp.typecode,*shape_tmp)
   index_tmp = Array.new(shape_tmp.length,true)
 end
 index_tmp[k] = n..n
 na[*index_tmp] = na_tmp
	 end
	 return na
    else
	 raise TypeError, "argument must be Fixnum, Range, Hash, TrueClass, Array, or NArray"
    end
  }

  if(set_stride)
    na = self.get({"start"=>first, "end"=>last, "stride"=>stride})
  else
    na = self.get({"start"=>first, "end"=>last})
  end
  shape = na.shape
  (a.length-1).downto(0){ |i|
	 shape.delete_at(i) if a[i].is_a?(Fixnum)
   }
   na.reshape!( *shape )
  na
end

#[]=(*a) ⇒ Object



692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
# File 'lib/numru/netcdf.rb', line 692

def []=(*a)
  val = a.pop
  a = __rubber_expansion(a)
  first = Array.new
  last = Array.new
  stride = Array.new
  set_stride = false
  a.each{|i|
    if(i.is_a?(Fixnum))
	 first.push(i)
	 last.push(i)
	 stride.push(1)
    elsif(i.is_a?(Range))
	 first.push(i.first)
	 last.push(i.exclude_end? ? i.last-1 : i.last)
	 stride.push(1)
    elsif(i.is_a?(Hash))
	 r = (i.to_a[0])[0]
      s = (i.to_a[0])[1]
      if ( !( r.is_a?(Range) ) || ! ( s.is_a?(Integer) ) )
  raise ArgumentError, "Hash argument must be {first..last, step}"
	 end
	 first.push(r.first) 
	 last.push(r.exclude_end? ? r.last-1 : r.last)
	 stride.push(s)
	 set_stride = true
    elsif(i.is_a?(TrueClass))
	 first.push(0)
	 last.push(-1)
	 stride.push(1)
    elsif(i.is_a?(Array) || i.is_a?(NArray))
	 a_new = a.dup
	 at = a.index(i)
	 i = NArray.to_na(i) if i.is_a?(Array)
	 val = NArray.to_na(val) if val.is_a?(Array)
	 rank_of_subset = a.dup.delete_if{|v| v.is_a?(Fixnum)}.length
	 if val.rank != rank_of_subset
 raise "rank of the rhs (#{val.rank}) is not equal to the rank "+
              "of the subset specified by #{a.inspect} (#{rank_of_subset})"
	 end
	 k = at
	 a[0..at-1].each{|x| if x.is_a?(Fixnum) then k -= 1 end}
	 if i.length != val.shape[k]
 raise "length of the #{k+1}-th dim of rhs is incorrect "+
              "(#{i.length} for #{val.shape[k]})"
	 end
	 index_tmp = Array.new(val.rank,true) if !val.is_a?(Numeric) #==>Array-like
	 for n in 0..i.length-1
 a_new[at] = i[n]..i[n]
 if !val.is_a?(Numeric) then
   index_tmp[k] = n..n
   self[*a_new] = val[*index_tmp]
 else
   self[*a_new] = val
 end
	 end
	 return self
    else
	 raise TypeError, "argument must be Fixnum, Range, Hash, TrueClass, Array, or NArray"
    end
  }

  if(set_stride)
	self.put(val, {"start"=>first, "end"=>last, "stride"=>stride})
  else
	self.put(val, {"start"=>first, "end"=>last})
  end
end

#att(att_name) ⇒ Object



1805
1806
1807
1808
1809
1810
1811
1812
1813
1814
1815
1816
1817
1818
1819
1820
1821
1822
1823
1824
1825
1826
1827
1828
1829
1830
1831
1832
1833
1834
1835
1836
1837
1838
# File 'ext/netcdfraw.c', line 1805

VALUE
NetCDF_var_att(VALUE Var,VALUE att_name)
{
  int ncid;
  int status;
  int varid;
  char *c_att_name;
  int c_attnump;
  struct NetCDFVar *Netcdf_var;
  struct NetCDFAtt *Netcdf_att;
  VALUE Att;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  Check_Type(att_name,T_STRING);
  c_att_name=StringValueCStr(att_name);
  
  status = nc_inq_attid(ncid,varid,c_att_name,&c_attnump);
  if(status == NC_NOERR){
    Netcdf_att=NetCDF_att_init(ncid,varid,c_att_name);
    Att=Data_Wrap_Struct(cNetCDFAtt,0,Netcdf_att_free,Netcdf_att);
    return Att;
  }
  else if(status == NC_ENOTATT){
    return Qnil;
  }
  else{
    NC_RAISE(status);
    return Qnil;
  }
}

#att_namesObject



253
254
255
256
257
258
259
260
261
# File 'lib/numru/netcdf.rb', line 253

def att_names
  num_att=natts()
  names=[]
  for attnum in 0..num_att-1
    obj_Att=id2att(attnum)
    names=names+[obj_Att.name]
  end
  return names
end

#cloneObject

The methods of the NetCDFVar class



545
546
547
548
549
550
551
552
553
554
555
556
# File 'ext/netcdfraw.c', line 545

VALUE
NetCDF_var_clone(VALUE var)
{
    VALUE clone;
    struct NetCDFVar *nv1, *nv2;

    Data_Get_Struct(var, struct NetCDFVar, nv1);
    nv2 = NetCDF_var_init(nv1->ncid, nv1->varid, nv1->file);
    clone = Data_Wrap_Struct(cNetCDFVar, nc_mark_obj, NetCDF_var_free, nv2);
    CLONESETUP(clone, var);
    return clone;
}

#dim(ith) ⇒ Object



1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
# File 'ext/netcdfraw.c', line 1411

VALUE
NetCDF_var_dim(VALUE Var, VALUE ith)
{
  int ncid, *dimids, ndims, varid, status, c_ith;
  struct NetCDFVar *Netcdf_var;
  struct NetCDFDim *Netcdf_dim;
  VALUE Dim;

  Check_Type(ith,T_FIXNUM);
  c_ith=NUM2INT(ith);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(c_ith < 0 || c_ith >= ndims) {
      rb_raise(rb_eNetcdfError, "dimension count less than zero or greater than ndims-1");
  }
  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  Netcdf_dim = NetCDF_dim_init(ncid,dimids[ndims-1-c_ith]);
  Dim = Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim);
  return(Dim);
}

#dim_namesObject



247
248
249
250
251
# File 'lib/numru/netcdf.rb', line 247

def dim_names
  ary = Array.new()
  dims.each{|dim| ary.push(dim.name)}
  ary
end

#dimsObject



1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
# File 'ext/netcdfraw.c', line 1386

VALUE
NetCDF_var_dims(VALUE Var)
{
  int ncid, *dimids, ndims, varid, i, status;
  struct NetCDFVar *Netcdf_var;
  struct NetCDFDim *Netcdf_dim;
  VALUE Dims;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  Dims = rb_ary_new();
  for(i=0;i<ndims;i++){
      Netcdf_dim = NetCDF_dim_init(ncid,dimids[ndims-1-i]);
      rb_ary_push(Dims, 
		  Data_Wrap_Struct(cNetCDFDim,0,NetCDF_dim_free,Netcdf_dim));
  }
  return(Dims);
}

#each_attObject



239
240
241
242
243
244
245
# File 'lib/numru/netcdf.rb', line 239

def each_att
  num_att=natts()
  for attnum in 0..num_att-1
	obj_Att=id2att(attnum)
	yield(obj_Att)
  end
end

#fileObject



1772
1773
1774
1775
1776
1777
1778
1779
1780
# File 'ext/netcdfraw.c', line 1772

VALUE
NetCDF_var_file(VALUE Var)
{
  struct NetCDFVar *Netcdf_var;
  /* VALUE file; */
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  
  return (Netcdf_var->file);
}

#get_var1_byte(start) ⇒ Object



2254
2255
2256
2257
2258
2259
2260
2261
2262
2263
2264
2265
2266
2267
2268
2269
2270
2271
2272
2273
2274
2275
2276
2277
2278
2279
2280
2281
2282
2283
2284
2285
2286
2287
2288
2289
2290
2291
2292
2293
2294
2295
2296
2297
2298
2299
2300
2301
2302
2303
2304
2305
2306
2307
2308
2309
2310
2311
2312
2313
2314
# File 'ext/netcdfraw.c', line 2254

VALUE 
NetCDF_get_var1_byte(VALUE Var,VALUE start)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int dimids[NC_MAX_DIMS];
  size_t dimlen;
  int *c_count;
  int nc_tlen=0;
  VALUE NArray;

  
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR)NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }
  
  c_start=ALLOCA_N(size_t,ndims);
  c_count=ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
    
    c_count[i]=1;
    nc_tlen = 1+nc_tlen;
  }
  
  
  
  
  Cbyte_to_NArray(NArray,ndims,c_count,ptr);
  status = nc_get_var1_uchar(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;

}

#get_var1_char(start) ⇒ Object



2192
2193
2194
2195
2196
2197
2198
2199
2200
2201
2202
2203
2204
2205
2206
2207
2208
2209
2210
2211
2212
2213
2214
2215
2216
2217
2218
2219
2220
2221
2222
2223
2224
2225
2226
2227
2228
2229
2230
2231
2232
2233
2234
2235
2236
2237
2238
2239
2240
2241
2242
2243
2244
2245
2246
2247
2248
2249
2250
2251
2252
# File 'ext/netcdfraw.c', line 2192

VALUE 
NetCDF_get_var1_char(VALUE Var,VALUE start)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int dimids[NC_MAX_DIMS];
  size_t dimlen;
  int *c_count;
  int nc_tlen=0;
  VALUE NArray;

  
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR)NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }
  
  c_start=ALLOCA_N(size_t,ndims);
  c_count=ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
    
    c_count[i]=1;
    nc_tlen = 1+nc_tlen;
  }
  
  
  
  
  Cbyte_to_NArray(NArray,ndims,c_count,ptr);
  status = nc_get_var1_text(ncid,varid,c_start,(char *)ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;

}

#get_var1_float(start) ⇒ Object



2490
2491
2492
2493
2494
2495
2496
2497
2498
2499
2500
2501
2502
2503
2504
2505
2506
2507
2508
2509
2510
2511
2512
2513
2514
2515
2516
2517
2518
2519
2520
2521
2522
2523
2524
2525
2526
2527
2528
2529
2530
2531
2532
2533
2534
2535
2536
2537
2538
2539
2540
2541
2542
2543
2544
2545
2546
# File 'ext/netcdfraw.c', line 2490

VALUE 
NetCDF_get_var1_double(VALUE Var,VALUE start)
{
  int ncid;
  int varid;
  int status;
  double *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int dimids[NC_MAX_DIMS];
  size_t dimlen;
  int *c_count;
  int nc_tlen=0;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR)NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }
  
  c_start=ALLOCA_N(size_t,ndims);
  c_count=ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status !=NC_NOERR) NC_RAISE(status);
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
    c_count[i]=1;
    nc_tlen = nc_tlen+1;
  }
  
  Cdouble_to_NArray(NArray,ndims,c_count,ptr);
  
  status = nc_get_var1_double(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;

}

#get_var1_int(start) ⇒ Object



2374
2375
2376
2377
2378
2379
2380
2381
2382
2383
2384
2385
2386
2387
2388
2389
2390
2391
2392
2393
2394
2395
2396
2397
2398
2399
2400
2401
2402
2403
2404
2405
2406
2407
2408
2409
2410
2411
2412
2413
2414
2415
2416
2417
2418
2419
2420
2421
2422
2423
2424
2425
2426
2427
2428
2429
2430
# File 'ext/netcdfraw.c', line 2374

VALUE 
NetCDF_get_var1_int(VALUE Var,VALUE start)
{
  int ncid;
  int varid;
  int status;
  int *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int dimids[NC_MAX_DIMS];
  size_t dimlen;
  int *c_count;
  int nc_tlen=0;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR)NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }
  
  c_start=ALLOCA_N(size_t,ndims);
  c_count=ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
    c_count[i]=1;
    nc_tlen= nc_tlen+1;
  }
  
  Clint_to_NArray(NArray,ndims,c_count,ptr);
  
  status = nc_get_var1_int(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;

}

#get_var1_sfloat(start) ⇒ Object



2432
2433
2434
2435
2436
2437
2438
2439
2440
2441
2442
2443
2444
2445
2446
2447
2448
2449
2450
2451
2452
2453
2454
2455
2456
2457
2458
2459
2460
2461
2462
2463
2464
2465
2466
2467
2468
2469
2470
2471
2472
2473
2474
2475
2476
2477
2478
2479
2480
2481
2482
2483
2484
2485
2486
2487
2488
# File 'ext/netcdfraw.c', line 2432

VALUE 
NetCDF_get_var1_float(VALUE Var,VALUE start)
{
  int ncid;
  int varid;
  int status;
  float *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int dimids[NC_MAX_DIMS];
  size_t dimlen;
  int *c_count;
  int nc_tlen=0;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR)NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }
  
  c_start=ALLOCA_N(size_t,ndims);
  c_count=ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    status = nc_inq_vardimid(ncid, varid, dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
    c_count[i]=1;
    nc_tlen = nc_tlen+1;
  }
  
  Cfloat_to_NArray(NArray,ndims,c_count,ptr);
  
  status = nc_get_var1_float(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;

}

#get_var1_sint(start) ⇒ Object



2316
2317
2318
2319
2320
2321
2322
2323
2324
2325
2326
2327
2328
2329
2330
2331
2332
2333
2334
2335
2336
2337
2338
2339
2340
2341
2342
2343
2344
2345
2346
2347
2348
2349
2350
2351
2352
2353
2354
2355
2356
2357
2358
2359
2360
2361
2362
2363
2364
2365
2366
2367
2368
2369
2370
2371
2372
# File 'ext/netcdfraw.c', line 2316

VALUE 
NetCDF_get_var1_sint(VALUE Var,VALUE start)
{
  int ncid;
  int varid;
  int status;
  short *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int dimids[NC_MAX_DIMS];
  size_t dimlen;
  int *c_count;
  int nc_tlen=0;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }
  
  c_start=ALLOCA_N(size_t,ndims);
  c_count=ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    l_start = NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
    c_count[i]=1;
    nc_tlen = nc_tlen+1;
  }
  
  Csint_to_NArray(NArray,ndims,c_count,ptr);
  
  status = nc_get_var1_short(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;

}

#get_var_byteObject



1972
1973
1974
1975
1976
1977
1978
1979
1980
1981
1982
1983
1984
1985
1986
1987
1988
1989
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
# File 'ext/netcdfraw.c', line 1972

VALUE
NetCDF_get_var_byte(VALUE Var)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  struct NetCDFVar *Netcdf_var;
  int i=0;
  int ndimsp;
  int *dimids;
  size_t lengthp;
  int *shape;    /* NArray uses int instead of size_t */
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  dimids = ALLOCA_N(int,ndimsp);
  if (ndimsp != 0){
      shape = ALLOCA_N(int,ndimsp);
      for(i=0;i<ndimsp;i++){
	  status = nc_inq_vardimid(ncid,varid,dimids);
	  if(status != NC_NOERR) NC_RAISE(status);
	  nc_inq_dimlen(ncid,dimids[i],&lengthp);
	  shape[ndimsp-1-i]=lengthp;
      }
  } else {
      ndimsp = 1;
      shape = ALLOCA_N(int,1);
      shape[0]=1;
  }

  Cbyte_to_NArray(NArray,ndimsp,shape,ptr);
  
  status = nc_get_var_uchar(ncid,varid,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_var_charObject

Follow methods is to connect “NArray” with “Netcdf”



1928
1929
1930
1931
1932
1933
1934
1935
1936
1937
1938
1939
1940
1941
1942
1943
1944
1945
1946
1947
1948
1949
1950
1951
1952
1953
1954
1955
1956
1957
1958
1959
1960
1961
1962
1963
1964
1965
1966
1967
1968
1969
1970
# File 'ext/netcdfraw.c', line 1928

VALUE
NetCDF_get_var_char(VALUE Var)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  struct NetCDFVar *Netcdf_var;
  int i=0;
  int ndimsp;
  int *dimids;
  size_t lengthp;
  int *shape;    /* NArray uses int instead of size_t */
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  dimids = ALLOCA_N(int,ndimsp);
  if (ndimsp != 0){
      shape = ALLOCA_N(int,ndimsp);
      for(i=0;i<ndimsp;i++){
	  status = nc_inq_vardimid(ncid,varid,dimids);
	  if(status != NC_NOERR) NC_RAISE(status);
	  nc_inq_dimlen(ncid,dimids[i],&lengthp);
	  shape[ndimsp-1-i]=lengthp;
      }
  } else {
      ndimsp = 1;
      shape = ALLOCA_N(int,1);
      shape[0]=1;
  }

  Cbyte_to_NArray(NArray,ndimsp,shape,ptr);
  
  status = nc_get_var_text(ncid,varid,(char *)ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_var_floatObject



2148
2149
2150
2151
2152
2153
2154
2155
2156
2157
2158
2159
2160
2161
2162
2163
2164
2165
2166
2167
2168
2169
2170
2171
2172
2173
2174
2175
2176
2177
2178
2179
2180
2181
2182
2183
2184
2185
2186
2187
2188
2189
2190
# File 'ext/netcdfraw.c', line 2148

VALUE
NetCDF_get_var_double(VALUE Var)
{
  int ncid;
  int varid;
  int status;
  double *ptr;
  struct NetCDFVar *Netcdf_var;
  int i=0;
  int ndimsp;
  int *dimids;
  size_t lengthp;
  int *shape;    /* NArray uses int instead of size_t */
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  dimids = ALLOCA_N(int,ndimsp);
  if (ndimsp != 0){
      shape = ALLOCA_N(int,ndimsp);
      for(i=0;i<ndimsp;i++){
	  status = nc_inq_vardimid(ncid,varid,dimids);
	  if(status != NC_NOERR) NC_RAISE(status);
	  nc_inq_dimlen(ncid,dimids[i],&lengthp);
	  shape[ndimsp-1-i]=lengthp;
      }
  } else {
      ndimsp = 1;
      shape = ALLOCA_N(int,1);
      shape[0]=1;
  }

  Cdouble_to_NArray(NArray,ndimsp,shape,ptr);
  
  status = nc_get_var_double(ncid,varid,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_var_intObject



2060
2061
2062
2063
2064
2065
2066
2067
2068
2069
2070
2071
2072
2073
2074
2075
2076
2077
2078
2079
2080
2081
2082
2083
2084
2085
2086
2087
2088
2089
2090
2091
2092
2093
2094
2095
2096
2097
2098
2099
2100
2101
2102
# File 'ext/netcdfraw.c', line 2060

VALUE
NetCDF_get_var_int(VALUE Var)
{
  int ncid;
  int varid;
  int status;
  int *ptr;
  struct NetCDFVar *Netcdf_var;
  int i=0;
  int ndimsp;
  int *dimids;
  size_t lengthp;
  int *shape;    /* NArray uses int instead of size_t */
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  dimids = ALLOCA_N(int,ndimsp);
  if (ndimsp != 0){
      shape = ALLOCA_N(int,ndimsp);
      for(i=0;i<ndimsp;i++){
	  status = nc_inq_vardimid(ncid,varid,dimids);
	  if(status != NC_NOERR) NC_RAISE(status);
	  nc_inq_dimlen(ncid,dimids[i],&lengthp);
	  shape[ndimsp-1-i]=lengthp;
      }
  } else {
      ndimsp = 1;
      shape = ALLOCA_N(int,1);
      shape[0]=1;
  }

  Clint_to_NArray(NArray,ndimsp,shape,ptr);
  
  status = nc_get_var_int(ncid,varid,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_var_sfloatObject



2104
2105
2106
2107
2108
2109
2110
2111
2112
2113
2114
2115
2116
2117
2118
2119
2120
2121
2122
2123
2124
2125
2126
2127
2128
2129
2130
2131
2132
2133
2134
2135
2136
2137
2138
2139
2140
2141
2142
2143
2144
2145
2146
# File 'ext/netcdfraw.c', line 2104

VALUE
NetCDF_get_var_float(VALUE Var)
{
  int ncid;
  int varid;
  int status;
  float *ptr;
  struct NetCDFVar *Netcdf_var;
  int i=0;
  int ndimsp;
  int *dimids;
  size_t lengthp;
  int *shape;    /* NArray uses int instead of size_t */
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  dimids = ALLOCA_N(int,ndimsp);
  if (ndimsp != 0){
      shape = ALLOCA_N(int,ndimsp);
      for(i=0;i<ndimsp;i++){
	  status = nc_inq_vardimid(ncid,varid,dimids);
	  if(status != NC_NOERR) NC_RAISE(status);
	  nc_inq_dimlen(ncid,dimids[i],&lengthp);
	  shape[ndimsp-1-i]=lengthp;
      }
  } else {
      ndimsp = 1;
      shape = ALLOCA_N(int,1);
      shape[0]=1;
  }

  Cfloat_to_NArray(NArray,ndimsp,shape,ptr);

  status = nc_get_var_float(ncid,varid,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_var_sintObject



2016
2017
2018
2019
2020
2021
2022
2023
2024
2025
2026
2027
2028
2029
2030
2031
2032
2033
2034
2035
2036
2037
2038
2039
2040
2041
2042
2043
2044
2045
2046
2047
2048
2049
2050
2051
2052
2053
2054
2055
2056
2057
2058
# File 'ext/netcdfraw.c', line 2016

VALUE
NetCDF_get_var_sint(VALUE Var)
{
  int ncid;
  int varid;
  int status;
  short *ptr;
  struct NetCDFVar *Netcdf_var;
  int i=0;
  int ndimsp;
  int *dimids;
  size_t lengthp;
  int *shape;    /* NArray uses int instead of size_t */
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  dimids = ALLOCA_N(int,ndimsp);
  if (ndimsp != 0){
      shape = ALLOCA_N(int,ndimsp);
      for(i=0;i<ndimsp;i++){
	  status = nc_inq_vardimid(ncid,varid,dimids);
	  if(status != NC_NOERR) NC_RAISE(status);
	  nc_inq_dimlen(ncid,dimids[i],&lengthp);
	  shape[ndimsp-1-i]=lengthp;
      }
  } else {
      ndimsp = 1;
      shape = ALLOCA_N(int,1);
      shape[0]=1;
  }

  Csint_to_NArray(NArray,ndimsp,shape,ptr);
  
  status = nc_get_var_short(ncid,varid,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_vars_byte(start, end, stride) ⇒ Object



2660
2661
2662
2663
2664
2665
2666
2667
2668
2669
2670
2671
2672
2673
2674
2675
2676
2677
2678
2679
2680
2681
2682
2683
2684
2685
2686
2687
2688
2689
2690
2691
2692
2693
2694
2695
2696
2697
2698
2699
2700
2701
2702
2703
2704
2705
2706
2707
2708
2709
2710
2711
2712
2713
2714
2715
2716
2717
2718
2719
2720
2721
2722
2723
2724
2725
2726
2727
2728
2729
2730
2731
2732
2733
2734
2735
2736
2737
2738
2739
2740
2741
2742
2743
2744
2745
2746
2747
2748
2749
2750
2751
2752
2753
2754
2755
2756
2757
2758
2759
2760
2761
2762
2763
2764
2765
2766
2767
2768
2769
2770
# File 'ext/netcdfraw.c', line 2660

VALUE
NetCDF_get_vars_byte(VALUE Var,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int *shape;    /* NArray uses int instead of size_t */
  int ndims;
  int *dimids;
  int nc_tlen=1;
  size_t dimlen;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }

  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims){
    rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
  }
  c_start = ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
   
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
  }

  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      c_stride[i]=1;
    }
    break;
  default:
    Check_Type(stride,T_ARRAY);
    if(RARRAY_LEN(stride) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
    }
    for(i=0;i<ndims; i++){
      c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
      if(c_stride[i]==0){
	rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
      }
    }
  }

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      nc_inq_dimlen(ncid,dimids[i],&dimlen);
      c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
    }
    break;
  default:
    Check_Type(end,T_ARRAY);
    if(RARRAY_LEN(end) <ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
    }
    for(i=0; i<ndims; i++){
      l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
      if(l_end < 0) {
	status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_end +=dimlen;
      }
      c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
    }
  }
  for(i=0;i<ndims;i++){
    nc_tlen = nc_tlen*c_count[i];
  }

  
  shape = ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    shape[ndims-1-i]=c_count[i];
  }
  
  Cbyte_to_NArray(NArray,ndims,shape,ptr);
  
  status = nc_get_vars_uchar(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_vars_char(start, end, stride) ⇒ Object



2548
2549
2550
2551
2552
2553
2554
2555
2556
2557
2558
2559
2560
2561
2562
2563
2564
2565
2566
2567
2568
2569
2570
2571
2572
2573
2574
2575
2576
2577
2578
2579
2580
2581
2582
2583
2584
2585
2586
2587
2588
2589
2590
2591
2592
2593
2594
2595
2596
2597
2598
2599
2600
2601
2602
2603
2604
2605
2606
2607
2608
2609
2610
2611
2612
2613
2614
2615
2616
2617
2618
2619
2620
2621
2622
2623
2624
2625
2626
2627
2628
2629
2630
2631
2632
2633
2634
2635
2636
2637
2638
2639
2640
2641
2642
2643
2644
2645
2646
2647
2648
2649
2650
2651
2652
2653
2654
2655
2656
2657
2658
# File 'ext/netcdfraw.c', line 2548

VALUE
NetCDF_get_vars_char(VALUE Var,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int *shape;    /* NArray uses int instead of size_t */
  int ndims;
  int *dimids;
  int nc_tlen=1;
  size_t dimlen;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }

  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims){
    rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
  }
  c_start = ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
   
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
  }

  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      c_stride[i]=1;
    }
    break;
  default:
    Check_Type(stride,T_ARRAY);
    if(RARRAY_LEN(stride) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
    }
    for(i=0;i<ndims; i++){
      c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
      if(c_stride[i]==0){
	rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
      }
    }
  }

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      nc_inq_dimlen(ncid,dimids[i],&dimlen);
      c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
    }
    break;
  default:
    Check_Type(end,T_ARRAY);
    if(RARRAY_LEN(end) <ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
    }
    for(i=0; i<ndims; i++){
      l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
      if(l_end < 0) {
	status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_end +=dimlen;
      }
      c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
    }
  }
  for(i=0;i<ndims;i++){
    nc_tlen = nc_tlen*c_count[i];
  }

  
  shape = ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    shape[ndims-1-i]=c_count[i];
  }
  
  Cbyte_to_NArray(NArray,ndims,shape,ptr);
  
  status = nc_get_vars_text(ncid,varid,c_start,c_count,c_stride,(char *)ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_vars_float(start, end, stride) ⇒ Object



3111
3112
3113
3114
3115
3116
3117
3118
3119
3120
3121
3122
3123
3124
3125
3126
3127
3128
3129
3130
3131
3132
3133
3134
3135
3136
3137
3138
3139
3140
3141
3142
3143
3144
3145
3146
3147
3148
3149
3150
3151
3152
3153
3154
3155
3156
3157
3158
3159
3160
3161
3162
3163
3164
3165
3166
3167
3168
3169
3170
3171
3172
3173
3174
3175
3176
3177
3178
3179
3180
3181
3182
3183
3184
3185
3186
3187
3188
3189
3190
3191
3192
3193
3194
3195
3196
3197
3198
3199
3200
3201
3202
3203
3204
3205
3206
3207
3208
3209
3210
3211
3212
3213
3214
3215
3216
3217
3218
3219
3220
3221
# File 'ext/netcdfraw.c', line 3111

VALUE
NetCDF_get_vars_double(VALUE Var,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  double *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int *shape;    /* NArray uses int instead of size_t */
  int ndims;
  int *dimids;
  int nc_tlen=1;
  size_t dimlen;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }

  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims){
    rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
  }
  c_start = ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
   
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
  }

  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      c_stride[i]=1;
    }
    break;
  default:
    Check_Type(stride,T_ARRAY);
    if(RARRAY_LEN(stride) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
    }
    for(i=0;i<ndims; i++){
      c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
      if(c_stride[i]==0){
	rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
      }
    }
  }

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      nc_inq_dimlen(ncid,dimids[i],&dimlen);
      c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
    }
    break;
  default:
    Check_Type(end,T_ARRAY);
    if(RARRAY_LEN(end) <ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
    }
    for(i=0; i<ndims; i++){
      l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
      if(l_end < 0) {
	status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_end +=dimlen;
      }
      c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
    }
  }
  
  for(i=0;i<ndims;i++){
    nc_tlen = nc_tlen*c_count[i];
  }

  shape = ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    shape[ndims-1-i]=c_count[i];
  }
  
  Cdouble_to_NArray(NArray,ndims,shape,ptr);
  
  status = nc_get_vars_double(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_vars_int(start, end, stride) ⇒ Object



2885
2886
2887
2888
2889
2890
2891
2892
2893
2894
2895
2896
2897
2898
2899
2900
2901
2902
2903
2904
2905
2906
2907
2908
2909
2910
2911
2912
2913
2914
2915
2916
2917
2918
2919
2920
2921
2922
2923
2924
2925
2926
2927
2928
2929
2930
2931
2932
2933
2934
2935
2936
2937
2938
2939
2940
2941
2942
2943
2944
2945
2946
2947
2948
2949
2950
2951
2952
2953
2954
2955
2956
2957
2958
2959
2960
2961
2962
2963
2964
2965
2966
2967
2968
2969
2970
2971
2972
2973
2974
2975
2976
2977
2978
2979
2980
2981
2982
2983
2984
2985
2986
2987
2988
2989
2990
2991
2992
2993
2994
2995
2996
# File 'ext/netcdfraw.c', line 2885

VALUE
NetCDF_get_vars_int(VALUE Var,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  int *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int *shape;    /* NArray uses int instead of size_t */
  int ndims;
  int *dimids;
  int nc_tlen=1;
  size_t dimlen;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }

  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims){
    rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
  }
  c_start = ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
   
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
  }

  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      c_stride[i]=1;
    }
    break;
  default:
    Check_Type(stride,T_ARRAY);
    if(RARRAY_LEN(stride) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
    }
    for(i=0;i<ndims; i++){
      c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
      if(c_stride[i]==0){
	rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
      }
    }
  }

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      nc_inq_dimlen(ncid,dimids[i],&dimlen);
      c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
    }
    break;
  default:
    Check_Type(end,T_ARRAY);
    if(RARRAY_LEN(end) <ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
    }
    for(i=0; i<ndims; i++){
      l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
      if(l_end < 0) {
	status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_end +=dimlen;
      }
      c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
    }
  }

  for(i=0;i<ndims;i++){
    nc_tlen = nc_tlen*c_count[i];
  }
  
  shape = ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    shape[ndims-1-i]=c_count[i];
  }

  Clint_to_NArray(NArray,ndims,shape,ptr);
  

  status = nc_get_vars_int(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_vars_sfloat(start, end, stride) ⇒ Object



2998
2999
3000
3001
3002
3003
3004
3005
3006
3007
3008
3009
3010
3011
3012
3013
3014
3015
3016
3017
3018
3019
3020
3021
3022
3023
3024
3025
3026
3027
3028
3029
3030
3031
3032
3033
3034
3035
3036
3037
3038
3039
3040
3041
3042
3043
3044
3045
3046
3047
3048
3049
3050
3051
3052
3053
3054
3055
3056
3057
3058
3059
3060
3061
3062
3063
3064
3065
3066
3067
3068
3069
3070
3071
3072
3073
3074
3075
3076
3077
3078
3079
3080
3081
3082
3083
3084
3085
3086
3087
3088
3089
3090
3091
3092
3093
3094
3095
3096
3097
3098
3099
3100
3101
3102
3103
3104
3105
3106
3107
3108
3109
# File 'ext/netcdfraw.c', line 2998

VALUE
NetCDF_get_vars_float(VALUE Var,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  float *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int *shape;    /* NArray uses int instead of size_t */
  int ndims;
  int *dimids;
  int nc_tlen=1;
  size_t dimlen;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }

  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims){
    rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
  }
  c_start = ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
   
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
  }

  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      c_stride[i]=1;
    }
    break;
  default:
    Check_Type(stride,T_ARRAY);
    if(RARRAY_LEN(stride) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
    }
    for(i=0;i<ndims; i++){
      c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
      if(c_stride[i]==0){
	rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
      }
    }
  }

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      nc_inq_dimlen(ncid,dimids[i],&dimlen);
      c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
    }
    break;
  default:
    Check_Type(end,T_ARRAY);
    if(RARRAY_LEN(end) <ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
    }
    for(i=0; i<ndims; i++){
      l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
      if(l_end < 0) {
	status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_end +=dimlen;
      }
      c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
    }
  }
  
  for(i=0;i<ndims;i++){
    nc_tlen = nc_tlen*c_count[i];
  }

  shape = ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    shape[ndims-1-i]=c_count[i];
  }
  
  Cfloat_to_NArray(NArray,ndims,shape,ptr);
  
  
  status = nc_get_vars_float(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);

  OBJ_TAINT(NArray);
  return NArray;
}

#get_vars_sint(start, end, stride) ⇒ Object



2772
2773
2774
2775
2776
2777
2778
2779
2780
2781
2782
2783
2784
2785
2786
2787
2788
2789
2790
2791
2792
2793
2794
2795
2796
2797
2798
2799
2800
2801
2802
2803
2804
2805
2806
2807
2808
2809
2810
2811
2812
2813
2814
2815
2816
2817
2818
2819
2820
2821
2822
2823
2824
2825
2826
2827
2828
2829
2830
2831
2832
2833
2834
2835
2836
2837
2838
2839
2840
2841
2842
2843
2844
2845
2846
2847
2848
2849
2850
2851
2852
2853
2854
2855
2856
2857
2858
2859
2860
2861
2862
2863
2864
2865
2866
2867
2868
2869
2870
2871
2872
2873
2874
2875
2876
2877
2878
2879
2880
2881
2882
2883
# File 'ext/netcdfraw.c', line 2772

VALUE
NetCDF_get_vars_sint(VALUE Var,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  short *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int *shape;    /* NArray uses int instead of size_t */
  int ndims;
  int *dimids;
  int nc_tlen=1;
  size_t dimlen;
  VALUE NArray;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid = Netcdf_var->ncid;
  varid = Netcdf_var->varid;
  
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);
  if(ndims == 0) {
    rb_raise(rb_eNetcdfError,"Cannot specify a subset of a rank-0 scalar\n");
  }

  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims){
    rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n");
  }
  c_start = ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
   
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;
  }

  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      c_stride[i]=1;
    }
    break;
  default:
    Check_Type(stride,T_ARRAY);
    if(RARRAY_LEN(stride) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'stride is too short\n");
    }
    for(i=0;i<ndims; i++){
      c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
      if(c_stride[i]==0){
	rb_raise(rb_eNetcdfError,"stride cannot be zero\n");
      }
    }
  }

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
    for(i=0; i<ndims; i++){
      nc_inq_dimlen(ncid,dimids[i],&dimlen);
      c_count[i]=(dimlen-c_start[i]-1)/c_stride[i]+1;
    }
    break;
  default:
    Check_Type(end,T_ARRAY);
    if(RARRAY_LEN(end) <ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n");
    }
    for(i=0; i<ndims; i++){
      l_end= NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
      if(l_end < 0) {
	status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_end +=dimlen;
      }
      c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
    }
  }
  
  for(i=0;i<ndims;i++){
    nc_tlen = nc_tlen*c_count[i];
  }
  
  shape = ALLOCA_N(int,ndims);
  for(i=0;i<ndims;i++){
    shape[ndims-1-i]=c_count[i];
  }

  Csint_to_NArray(NArray,ndims,shape,ptr);
  

  status = nc_get_vars_short(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  
  OBJ_TAINT(NArray);
  return NArray;
}

#get_with_miss(*args) ⇒ Object



8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
# File 'lib/numru/netcdf_miss.rb', line 8

def get_with_miss(*args)
  __interpret_missing_params if !defined?(@missval)
  data = simple_get(*args)
  if @vmin || @vmax
	if @vmin
	  mask = (data >= @vmin) 
	  mask = mask.and(data <= @vmax) if @vmax
	else
	  mask = (data <= @vmax)
	end
	data = NArrayMiss.to_nam(data, mask)
  elsif @missval	# only missing_value is present.
	mask = (data.ne(@missval)) 
	data = NArrayMiss.to_nam(data, mask)
  end
  data
end

#get_with_miss_and_scaling(*args) ⇒ Object



26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
# File 'lib/numru/netcdf_miss.rb', line 26

def get_with_miss_and_scaling(*args)
  __interpret_missing_params if !defined?(@missval)
  data = simple_get(*args)
  if @vmin || @vmax
	if @vmin
	  mask = (data >= @vmin) 
	  mask = mask.and(data <= @vmax) if @vmax
	else
	  mask = (data <= @vmax)
	end
	data = NArrayMiss.to_nam(data, mask)
  elsif @missval	# only missing_value is present.
	mask = (data.ne(@missval))
	data = NArrayMiss.to_nam(data, mask)
  end
  data = unpack( data )
  data
end

#inspectObject



761
762
763
# File 'lib/numru/netcdf.rb', line 761

def inspect
  'NetCDFVar:'+file.path+'?var='+name
end

#nameObject



1664
1665
1666
1667
1668
1669
1670
1671
1672
1673
1674
1675
1676
1677
1678
1679
1680
1681
1682
1683
1684
# File 'ext/netcdfraw.c', line 1664

VALUE
NetCDF_var_inq_name(VALUE Var)
{
  int ncid;
  int status;
  int varid;
  char c_var_name[NC_MAX_NAME];
  struct NetCDFVar *Netcdf_var;
  VALUE Var_name;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);

  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varname(ncid,varid,c_var_name);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Var_name=rb_str_new2(c_var_name);
  OBJ_TAINT(Var_name);
  return Var_name;
}

#name=(var_new_name) ⇒ Object



1782
1783
1784
1785
1786
1787
1788
1789
1790
1791
1792
1793
1794
1795
1796
1797
1798
1799
1800
1801
1802
1803
# File 'ext/netcdfraw.c', line 1782

VALUE
NetCDF_var_rename(VALUE Var,VALUE var_new_name)
{
  int ncid;
  int status;
  int varid;
  char *c_var_new_name;
  struct NetCDFVar *Netcdf_var;
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  Check_Type(var_new_name,T_STRING);
  c_var_new_name=StringValueCStr(var_new_name);
  
  status = nc_rename_var(ncid,varid,c_var_new_name);
  if(status !=NC_NOERR) NC_RAISE(status);

  return Qnil;
}

#nattsObject



1749
1750
1751
1752
1753
1754
1755
1756
1757
1758
1759
1760
1761
1762
1763
1764
1765
1766
1767
1768
1769
1770
# File 'ext/netcdfraw.c', line 1749

VALUE
NetCDF_var_natts(VALUE Var)
{
  int ncid;
  int status;
  int varid;
  int nattsp;
  struct NetCDFVar *Netcdf_var;
  VALUE Var_natts;
  

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  
  status= nc_inq_varnatts(ncid,varid,&nattsp);
  if(status !=NC_NOERR) NC_RAISE(status);
  
  Var_natts=INT2FIX(nattsp);
  return Var_natts;
}

#ndimsObject Also known as: rank



1686
1687
1688
1689
1690
1691
1692
1693
1694
1695
1696
1697
1698
1699
1700
1701
1702
1703
1704
# File 'ext/netcdfraw.c', line 1686

VALUE
NetCDF_var_ndims(VALUE Var)
{
  int ncid;
  int status;
  int varid;
  int ndimsp;
  struct NetCDFVar *Netcdf_var;
  VALUE Var_ndims;

  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  Var_ndims=INT2FIX(ndimsp);
  return Var_ndims;
}

#ntypeObject



1706
1707
1708
1709
1710
1711
1712
1713
1714
1715
1716
1717
1718
1719
1720
1721
1722
1723
1724
1725
1726
# File 'ext/netcdfraw.c', line 1706

VALUE
NetCDF_var_vartype(VALUE Var)
{
  int ncid;
  int status;
  int varid;
  nc_type xtypep;
  struct NetCDFVar *Netcdf_var;
  const char *Vartype;
  
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  status = nc_inq_vartype(ncid,varid,&xtypep);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Vartype=nctype2natype(xtypep);
  return(rb_str_new2(Vartype));
}

#pack(na) ⇒ Object

The put and get methods in the NetCDFVar class



289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
# File 'lib/numru/netcdf.rb', line 289

def pack(na)
  sf = att('scale_factor')
  ao = att('add_offset')
  if ( sf == nil && ao == nil ) then
    na
  else
    na = NArray.to_na(na) if na.is_a?(Array)
    if sf
	 csf = sf.get
	 raise NetcdfError,"scale_factor is not a numeric" if csf.is_a?(String)
	 raise NetcdfError, "scale_factor is not unique" if csf.length != 1
	 raise NetcdfError, "zero scale_factor" if csf[0] == 0
    else
	 csf = nil
    end
    if ao
	 cao = ao.get
	 raise NetcdfError, "add_offset is not a numeric" if cao.is_a?(String)
	 raise NetcdfError, "add_offset is not unique" if cao.length != 1
    else
	 cao = nil
    end
    if csf and cao
	 packed = (na - cao) / csf
    elsif csf
	 packed = na / csf
    elsif cao
	 packed = na - cao
    end
    if self.typecode <= NArray::LINT
      packed = packed.round
    end
    packed
  end
end

#put_att(attname, val, atttype = nil) ⇒ Object



263
264
265
# File 'lib/numru/netcdf.rb', line 263

def put_att(attname,val,atttype=nil)
   put_attraw(attname,val,atttype)
end

#put_attrawObject

atttype: nil or a String (“string”,“int”,etc). If nil,

the type of attribute is determined from the type of value


744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
# File 'ext/netcdfraw.c', line 744

VALUE
NetCDF_put_att_var(VALUE var,VALUE att_name,VALUE value,VALUE atttype)
     /*
      * atttype: nil or a String ("string","int",etc). If nil,
      *          the type of attribute is determined from the type of value
      */
{
    struct NetCDFVar *ncvar;
    char *name;

    rb_secure(4);
    Data_Get_Struct(var,struct NetCDFVar,ncvar);
    Check_Type(att_name,T_STRING);
    name = RSTRING_PTR(att_name);

    return( NetCDF_put_att__(ncvar->ncid, name, value, atttype, ncvar->varid));
}

#put_var1_byte(NArray, start) ⇒ Object



3552
3553
3554
3555
3556
3557
3558
3559
3560
3561
3562
3563
3564
3565
3566
3567
3568
3569
3570
3571
3572
3573
3574
3575
3576
3577
3578
3579
3580
3581
3582
3583
3584
3585
3586
3587
3588
3589
3590
3591
3592
3593
3594
3595
3596
3597
3598
3599
3600
3601
# File 'ext/netcdfraw.c', line 3552

VALUE
NetCDF_put_var1_byte(VALUE Var,VALUE NArray,VALUE start)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int   *dimids;
  size_t dimlen;
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  
  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) <ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }

  c_start=ALLOCA_N(size_t,ndims);
  for(i=0;i<ndims;i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;

  }
  Array_to_Cbyte(NArray,ptr);

  status = nc_put_var1_uchar(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var1_char(NArray, start) ⇒ Object



3501
3502
3503
3504
3505
3506
3507
3508
3509
3510
3511
3512
3513
3514
3515
3516
3517
3518
3519
3520
3521
3522
3523
3524
3525
3526
3527
3528
3529
3530
3531
3532
3533
3534
3535
3536
3537
3538
3539
3540
3541
3542
3543
3544
3545
3546
3547
3548
3549
3550
# File 'ext/netcdfraw.c', line 3501

VALUE
NetCDF_put_var1_char(VALUE Var,VALUE NArray,VALUE start)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int   *dimids;
  size_t dimlen;
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  
  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) <ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }

  c_start=ALLOCA_N(size_t,ndims);
  for(i=0;i<ndims;i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;

  }
  Array_to_Cbyte(NArray,ptr);

  status = nc_put_var1_text(ncid,varid,c_start,(char *)ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var1_float(NArray, start) ⇒ Object



3755
3756
3757
3758
3759
3760
3761
3762
3763
3764
3765
3766
3767
3768
3769
3770
3771
3772
3773
3774
3775
3776
3777
3778
3779
3780
3781
3782
3783
3784
3785
3786
3787
3788
3789
3790
3791
3792
3793
3794
3795
3796
3797
3798
3799
3800
3801
3802
3803
3804
# File 'ext/netcdfraw.c', line 3755

VALUE
NetCDF_put_var1_double(VALUE Var,VALUE NArray,VALUE start)
{
  int ncid;
  int varid;
  int status;
  double *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int   *dimids;
  size_t dimlen;
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  
  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) <ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }

  c_start=ALLOCA_N(size_t,ndims);
  for(i=0;i<ndims;i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;

  }
  Array_to_Cdouble(NArray,ptr);

  status = nc_put_var1_double(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var1_int(NArray, start) ⇒ Object



3653
3654
3655
3656
3657
3658
3659
3660
3661
3662
3663
3664
3665
3666
3667
3668
3669
3670
3671
3672
3673
3674
3675
3676
3677
3678
3679
3680
3681
3682
3683
3684
3685
3686
3687
3688
3689
3690
3691
3692
3693
3694
3695
3696
3697
3698
3699
3700
3701
3702
# File 'ext/netcdfraw.c', line 3653

VALUE
NetCDF_put_var1_int(VALUE Var,VALUE NArray,VALUE start)
{
  int ncid;
  int varid;
  int status;
  int *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int   *dimids;
  size_t dimlen;
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  
  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) <ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }

  c_start=ALLOCA_N(size_t,ndims);
  for(i=0;i<ndims;i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;

  }
  Array_to_Clint(NArray,ptr);

  status = nc_put_var1_int(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var1_sfloat(NArray, start) ⇒ Object



3704
3705
3706
3707
3708
3709
3710
3711
3712
3713
3714
3715
3716
3717
3718
3719
3720
3721
3722
3723
3724
3725
3726
3727
3728
3729
3730
3731
3732
3733
3734
3735
3736
3737
3738
3739
3740
3741
3742
3743
3744
3745
3746
3747
3748
3749
3750
3751
3752
3753
# File 'ext/netcdfraw.c', line 3704

VALUE
NetCDF_put_var1_float(VALUE Var,VALUE NArray,VALUE start)
{
  int ncid;
  int varid;
  int status;
  float *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int   *dimids;
  size_t dimlen;
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  
  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) <ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }

  c_start=ALLOCA_N(size_t,ndims);
  for(i=0;i<ndims;i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;

  }
  Array_to_Cfloat(NArray,ptr);

  status = nc_put_var1_float(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var1_sint(NArray, start) ⇒ Object



3603
3604
3605
3606
3607
3608
3609
3610
3611
3612
3613
3614
3615
3616
3617
3618
3619
3620
3621
3622
3623
3624
3625
3626
3627
3628
3629
3630
3631
3632
3633
3634
3635
3636
3637
3638
3639
3640
3641
3642
3643
3644
3645
3646
3647
3648
3649
3650
3651
3652
# File 'ext/netcdfraw.c', line 3603

VALUE
NetCDF_put_var1_sint(VALUE Var,VALUE NArray,VALUE start)
{
  int ncid;
  int varid;
  int status;
  short *ptr;
  int i;
  struct NetCDFVar *Netcdf_var;
  long l_start;
  size_t *c_start;
  int ndims;
  int   *dimids;
  size_t dimlen;
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid,varid,&ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  
  dimids = ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid,varid,dimids);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) <ndims) {
    rb_raise(rb_eNetcdfError,"Length of 'start' is too short\n");
  }

  c_start=ALLOCA_N(size_t,ndims);
  for(i=0;i<ndims;i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
      status = nc_inq_dimlen(ncid,dimids[i],&dimlen);
      if(status != NC_NOERR) NC_RAISE(status);
      l_start += dimlen;
    }
    c_start[i]=l_start;

  }
  Array_to_Csint(NArray,ptr);

  status = nc_put_var1_short(ncid,varid,c_start,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var_byte(NArray) ⇒ Object



3269
3270
3271
3272
3273
3274
3275
3276
3277
3278
3279
3280
3281
3282
3283
3284
3285
3286
3287
3288
3289
3290
3291
3292
3293
3294
3295
3296
3297
3298
3299
3300
3301
3302
3303
3304
3305
3306
3307
3308
3309
3310
3311
3312
# File 'ext/netcdfraw.c', line 3269

VALUE
NetCDF_put_var_byte(VALUE Var,VALUE NArray)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr,scalar;
  int len,i=0;
  struct NetCDFVar *Netcdf_var;
  int nc_tlen=1;
  int ndimsp;
  int dimids[NC_MAX_DIMS];
  size_t lengthp;
  char *var_name;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  Array_to_Cbyte_len(NArray,ptr,len);
  
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  for(i=0;i<ndimsp;i++){
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    nc_inq_dimlen(ncid,dimids[i],&lengthp);
    nc_tlen=lengthp*nc_tlen;
  }
  if(len == 1 && len != nc_tlen){
    scalar = *ptr;
    ptr = ALLOCA_N(unsigned char,nc_tlen);
    for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
  } else if(len != nc_tlen){
    var_name=ALLOCA_N(char,NC_MAX_NAME);
    status = nc_inq_varname(ncid,varid,var_name);
    if(status != NC_NOERR) NC_RAISE(status );
    rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array in the '%s'\n",var_name);
  }
  status = nc_put_var_uchar(ncid,varid,ptr);
  if(status !=NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var_char(NArray) ⇒ Object

The “get*” or “put*” methods in the NetCDFVar class



3224
3225
3226
3227
3228
3229
3230
3231
3232
3233
3234
3235
3236
3237
3238
3239
3240
3241
3242
3243
3244
3245
3246
3247
3248
3249
3250
3251
3252
3253
3254
3255
3256
3257
3258
3259
3260
3261
3262
3263
3264
3265
3266
3267
# File 'ext/netcdfraw.c', line 3224

VALUE
NetCDF_put_var_char(VALUE Var,VALUE NArray)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr,scalar;
  int len,i=0;
  struct NetCDFVar *Netcdf_var;
  int nc_tlen=1;
  int ndimsp;
  int dimids[NC_MAX_DIMS];
  size_t lengthp;
  char *var_name;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  Array_to_Cbyte_len(NArray,ptr,len);
  
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  for(i=0;i<ndimsp;i++){
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    nc_inq_dimlen(ncid,dimids[i],&lengthp);
    nc_tlen=lengthp*nc_tlen;
  }
  if(len == 1 && len != nc_tlen){
    scalar = *ptr;
    ptr = ALLOCA_N(unsigned char,nc_tlen);
    for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
  } else if(len != nc_tlen){
    var_name=ALLOCA_N(char,NC_MAX_NAME);
    status = nc_inq_varname(ncid,varid,var_name);
    if(status != NC_NOERR) NC_RAISE(status );
    rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array in the '%s'\n",var_name);
  }
  status = nc_put_var_text(ncid,varid,(char *)ptr);
  if(status !=NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var_float(NArray) ⇒ Object



3454
3455
3456
3457
3458
3459
3460
3461
3462
3463
3464
3465
3466
3467
3468
3469
3470
3471
3472
3473
3474
3475
3476
3477
3478
3479
3480
3481
3482
3483
3484
3485
3486
3487
3488
3489
3490
3491
3492
3493
3494
3495
3496
3497
3498
3499
# File 'ext/netcdfraw.c', line 3454

VALUE
NetCDF_put_var_double(VALUE Var,VALUE NArray)
{
  int ncid;
  int varid;
  int status;
  double *ptr,scalar;
  int len,i=0;
  struct NetCDFVar *Netcdf_var;
  int nc_tlen=1;
  int ndimsp;
  int dimids[NC_MAX_DIMS];
  size_t lengthp;
  char *var_name;


  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  Array_to_Cdouble_len(NArray,ptr,len);

  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  for(i=0;i<ndimsp;i++){
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    nc_inq_dimlen(ncid,dimids[i],&lengthp);
    nc_tlen=lengthp*nc_tlen;
  }
  if(len == 1 && len != nc_tlen){
    scalar = *ptr;
    ptr = ALLOCA_N(double,nc_tlen);
    for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
  } else if(len != nc_tlen){
    var_name=ALLOCA_N(char,NC_MAX_NAME);
    status = nc_inq_varname(ncid,varid,var_name);
    if(status != NC_NOERR) NC_RAISE(status);
    rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
  }

  status = nc_put_var_double(ncid,varid,ptr);
  if(status !=NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var_int(NArray) ⇒ Object



3359
3360
3361
3362
3363
3364
3365
3366
3367
3368
3369
3370
3371
3372
3373
3374
3375
3376
3377
3378
3379
3380
3381
3382
3383
3384
3385
3386
3387
3388
3389
3390
3391
3392
3393
3394
3395
3396
3397
3398
3399
3400
3401
3402
3403
3404
# File 'ext/netcdfraw.c', line 3359

VALUE
NetCDF_put_var_int(VALUE Var,VALUE NArray)
{
  int ncid;
  int varid;
  int status;
  int *ptr,scalar;
  int len,i=0;
  struct NetCDFVar *Netcdf_var;
  int nc_tlen=1;
  int ndimsp;
  int dimids[NC_MAX_DIMS];
  size_t lengthp;
  char *var_name;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  Array_to_Clint_len(NArray,ptr,len);

  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  for(i=0;i<ndimsp;i++){
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    nc_inq_dimlen(ncid,dimids[i],&lengthp);
    nc_tlen=lengthp*nc_tlen;
  }
  if(len == 1 && len != nc_tlen){
    scalar = *ptr;
    ptr = ALLOCA_N(int,nc_tlen);
    for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
  } else if(len != nc_tlen){
    var_name=ALLOCA_N(char,NC_MAX_NAME);
    status = nc_inq_varname(ncid,varid,var_name);
    if(status != NC_NOERR) NC_RAISE(status);
    rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
  }
  
  
  status = nc_put_var_int(ncid,varid,ptr);
  if(status !=NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var_sfloat(NArray) ⇒ Object



3407
3408
3409
3410
3411
3412
3413
3414
3415
3416
3417
3418
3419
3420
3421
3422
3423
3424
3425
3426
3427
3428
3429
3430
3431
3432
3433
3434
3435
3436
3437
3438
3439
3440
3441
3442
3443
3444
3445
3446
3447
3448
3449
3450
3451
3452
# File 'ext/netcdfraw.c', line 3407

VALUE
NetCDF_put_var_float(VALUE Var,VALUE NArray)
{
  int ncid;
  int varid;
  int status;
  float *ptr,scalar;
  int len,i=0;
  struct NetCDFVar *Netcdf_var;
  int nc_tlen=1;
  int ndimsp;
  int dimids[NC_MAX_DIMS];
  size_t lengthp;
  char *var_name;
  
  
  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  Array_to_Cfloat_len(NArray,ptr,len);
  
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  for(i=0;i<ndimsp;i++){
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    nc_inq_dimlen(ncid,dimids[i],&lengthp);
    nc_tlen=lengthp*nc_tlen;
  }
  if(len == 1 && len != nc_tlen){
    scalar = *ptr;
    ptr = ALLOCA_N(float,nc_tlen);
    for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
  } else if(len != nc_tlen){
    var_name=ALLOCA_N(char,NC_MAX_NAME);
    status = nc_inq_varname(ncid,varid,var_name);
    if(status != NC_NOERR) NC_RAISE(status);
    rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
  }

  status = nc_put_var_float(ncid,varid,ptr);
  if(status !=NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_var_sint(NArray) ⇒ Object



3314
3315
3316
3317
3318
3319
3320
3321
3322
3323
3324
3325
3326
3327
3328
3329
3330
3331
3332
3333
3334
3335
3336
3337
3338
3339
3340
3341
3342
3343
3344
3345
3346
3347
3348
3349
3350
3351
3352
3353
3354
3355
3356
3357
# File 'ext/netcdfraw.c', line 3314

VALUE
NetCDF_put_var_short(VALUE Var,VALUE NArray)
{
  int ncid;
  int varid;
  int status;
  short *ptr,scalar;
  int len,i=0;
  struct NetCDFVar *Netcdf_var;
  int nc_tlen=1;
  int ndimsp;
  int dimids[NC_MAX_DIMS];
  size_t lengthp;
  char *var_name;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  Array_to_Csint_len(NArray,ptr,len);
  
  status = nc_inq_varndims(ncid,varid,&ndimsp);
  if(status != NC_NOERR) NC_RAISE(status);
  for(i=0;i<ndimsp;i++){
    status = nc_inq_vardimid(ncid,varid,dimids);
    if(status != NC_NOERR) NC_RAISE(status);
    nc_inq_dimlen(ncid,dimids[i],&lengthp);
    nc_tlen=lengthp*nc_tlen;
  }
  if(len == 1 && len != nc_tlen){
    scalar = *ptr;
    ptr = ALLOCA_N(short,nc_tlen);
    for(i=0;i<nc_tlen;i++){ptr[i]=scalar;}
  } else if(len != nc_tlen){
    var_name=ALLOCA_N(char,NC_MAX_NAME);
    status = nc_inq_varname(ncid,varid,var_name);
    if(status != NC_NOERR) NC_RAISE(status);
    rb_raise(rb_eNetcdfError,"Length of NArray don't equal to length of total array length in the '%s'\n",var_name);
  }

  status = nc_put_var_short(ncid,varid,ptr);
  if(status !=NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_vars_byte(NArray, start, end, stride) ⇒ Object



3913
3914
3915
3916
3917
3918
3919
3920
3921
3922
3923
3924
3925
3926
3927
3928
3929
3930
3931
3932
3933
3934
3935
3936
3937
3938
3939
3940
3941
3942
3943
3944
3945
3946
3947
3948
3949
3950
3951
3952
3953
3954
3955
3956
3957
3958
3959
3960
3961
3962
3963
3964
3965
3966
3967
3968
3969
3970
3971
3972
3973
3974
3975
3976
3977
3978
3979
3980
3981
3982
3983
3984
3985
3986
3987
3988
3989
3990
3991
3992
3993
3994
3995
3996
3997
3998
3999
4000
4001
4002
4003
4004
4005
4006
4007
4008
4009
4010
4011
4012
4013
4014
4015
4016
4017
# File 'ext/netcdfraw.c', line 3913

VALUE
NetCDF_put_vars_byte(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr,scalar;
  int len,i;
  int c_count_all=1;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int ndims;
  int   *shape;
  int   *dimids;
  size_t dimlen;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid, varid, dimids);
  if(status != NC_NOERR) NC_RAISE(status);

  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n"); 
  }
  c_start=ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
	status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_start += dimlen;
    }
    c_start[i]=l_start;
  }
  
  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_stride[i]=1;
      }
      break;
  default:
      Check_Type(stride,T_ARRAY);
      if(RARRAY_LEN(stride) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
	  if(c_stride[i]==0) {
	      rb_raise(rb_eNetcdfError, "stride cannot be zero\n"); 
	  }
      }
  }

  Array_to_Cbyte_len_shape(NArray,ptr,len,shape);

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_count[i]=shape[i];
      }
      c_count_all=len;
      break;
  default:
      Check_Type(end,T_ARRAY);
      if(RARRAY_LEN(end) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
	  if(l_end < 0) {
	      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	      if(status != NC_NOERR) NC_RAISE(status);
	      l_end += dimlen;
	  }
	  c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
	  c_count_all=c_count[i]*c_count_all;
      }
      if(len == 1 && len != c_count_all){
	  scalar = *ptr;
	  ptr = ALLOCA_N(unsigned char,c_count_all);
	  for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
      } else if(len != c_count_all) {
	rb_raise(rb_eNetcdfError, 
		 "lengh of the array does not agree with that of the subset\n"); 
      } 
  } 
  
  status = nc_put_vars_uchar(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_vars_char(NArray, start, end, stride) ⇒ Object



3807
3808
3809
3810
3811
3812
3813
3814
3815
3816
3817
3818
3819
3820
3821
3822
3823
3824
3825
3826
3827
3828
3829
3830
3831
3832
3833
3834
3835
3836
3837
3838
3839
3840
3841
3842
3843
3844
3845
3846
3847
3848
3849
3850
3851
3852
3853
3854
3855
3856
3857
3858
3859
3860
3861
3862
3863
3864
3865
3866
3867
3868
3869
3870
3871
3872
3873
3874
3875
3876
3877
3878
3879
3880
3881
3882
3883
3884
3885
3886
3887
3888
3889
3890
3891
3892
3893
3894
3895
3896
3897
3898
3899
3900
3901
3902
3903
3904
3905
3906
3907
3908
3909
3910
3911
# File 'ext/netcdfraw.c', line 3807

VALUE
NetCDF_put_vars_char(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  unsigned char *ptr,scalar;
  int len,i;
  int c_count_all=1;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int ndims;
  int   *shape;
  int   *dimids;
  size_t dimlen;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid, varid, dimids);
  if(status != NC_NOERR) NC_RAISE(status);

  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n"); 
  }
  c_start=ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
	status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_start += dimlen;
    }
    c_start[i]=l_start;
  }
  
  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_stride[i]=1;
      }
      break;
  default:
      Check_Type(stride,T_ARRAY);
      if(RARRAY_LEN(stride) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
	  if(c_stride[i]==0) {
	      rb_raise(rb_eNetcdfError, "stride cannot be zero\n"); 
	  }
      }
  }

  Array_to_Cbyte_len_shape(NArray,ptr,len,shape);

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_count[i]=shape[i];
      }
      c_count_all=len;
      break;
  default:
      Check_Type(end,T_ARRAY);
      if(RARRAY_LEN(end) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
	  if(l_end < 0) {
	      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	      if(status != NC_NOERR) NC_RAISE(status);
	      l_end += dimlen;
	  }
	  c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
	  c_count_all=c_count[i]*c_count_all;
      }
      if(len == 1 && len != c_count_all){
	  scalar = *ptr;
	  ptr = ALLOCA_N(unsigned char,c_count_all);
	  for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
      } else if(len != c_count_all) {
	rb_raise(rb_eNetcdfError, 
		 "lengh of the array does not agree with that of the subset\n"); 
      } 
  } 
  
  status = nc_put_vars_text(ncid,varid,c_start,c_count,c_stride,(char *)ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_vars_float(NArray, start, end, stride) ⇒ Object



4340
4341
4342
4343
4344
4345
4346
4347
4348
4349
4350
4351
4352
4353
4354
4355
4356
4357
4358
4359
4360
4361
4362
4363
4364
4365
4366
4367
4368
4369
4370
4371
4372
4373
4374
4375
4376
4377
4378
4379
4380
4381
4382
4383
4384
4385
4386
4387
4388
4389
4390
4391
4392
4393
4394
4395
4396
4397
4398
4399
4400
4401
4402
4403
4404
4405
4406
4407
4408
4409
4410
4411
4412
4413
4414
4415
4416
4417
4418
4419
4420
4421
4422
4423
4424
4425
4426
4427
4428
4429
4430
4431
4432
4433
4434
4435
4436
4437
4438
4439
4440
4441
4442
4443
4444
# File 'ext/netcdfraw.c', line 4340

VALUE
NetCDF_put_vars_double(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  double *ptr,scalar;
  int len,i;
  int c_count_all=1;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int ndims;
  int   *shape;
  int   *dimids;
  size_t dimlen;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid, varid, dimids);
  if(status != NC_NOERR) NC_RAISE(status);

  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n"); 
  }
  c_start=ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
	status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_start += dimlen;
    }
    c_start[i]=l_start;
  }
  
  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_stride[i]=1;
      }
      break;
  default:
      Check_Type(stride,T_ARRAY);
      if(RARRAY_LEN(stride) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
	  if(c_stride[i]==0) {
	      rb_raise(rb_eNetcdfError, "stride cannot be zero\n"); 
	  }
      }
  }

  Array_to_Cdouble_len_shape(NArray,ptr,len,shape);

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_count[i]=shape[i];
      }
      c_count_all=len;
      break;
  default:
      Check_Type(end,T_ARRAY);
      if(RARRAY_LEN(end) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
	  if(l_end < 0) {
	      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	      if(status != NC_NOERR) NC_RAISE(status);
	      l_end += dimlen;
	  }
	  c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
	  c_count_all=c_count[i]*c_count_all;
      }
      if(len == 1 && len != c_count_all){
	  scalar = *ptr;
	  ptr = ALLOCA_N(double,c_count_all);
	  for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
      } else if(len != c_count_all) {
	  rb_raise(rb_eNetcdfError, 
              "lengh of the array does not agree with that of the subset\n"); 
      }
  }

  status = nc_put_vars_double(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_vars_int(NArray, start, end, stride) ⇒ Object



4126
4127
4128
4129
4130
4131
4132
4133
4134
4135
4136
4137
4138
4139
4140
4141
4142
4143
4144
4145
4146
4147
4148
4149
4150
4151
4152
4153
4154
4155
4156
4157
4158
4159
4160
4161
4162
4163
4164
4165
4166
4167
4168
4169
4170
4171
4172
4173
4174
4175
4176
4177
4178
4179
4180
4181
4182
4183
4184
4185
4186
4187
4188
4189
4190
4191
4192
4193
4194
4195
4196
4197
4198
4199
4200
4201
4202
4203
4204
4205
4206
4207
4208
4209
4210
4211
4212
4213
4214
4215
4216
4217
4218
4219
4220
4221
4222
4223
4224
4225
4226
4227
4228
4229
4230
# File 'ext/netcdfraw.c', line 4126

VALUE
NetCDF_put_vars_int(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  int *ptr,scalar;
  int len,i;
  int c_count_all=1;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int ndims;
  int   *shape;
  int   *dimids;
  size_t dimlen;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid, varid, dimids);
  if(status != NC_NOERR) NC_RAISE(status);

  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n"); 
  }
  c_start=ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
	status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_start += dimlen;
    }
    c_start[i]=l_start;
  }
  
  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_stride[i]=1;
      }
      break;
  default:
      Check_Type(stride,T_ARRAY);
      if(RARRAY_LEN(stride) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
	  if(c_stride[i]==0) {
	      rb_raise(rb_eNetcdfError, "stride cannot be zero\n"); 
	  }
      }
  }

  Array_to_Clint_len_shape(NArray,ptr,len,shape);

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_count[i]=shape[i];
      }
      c_count_all=len;
      break;
  default:
      Check_Type(end,T_ARRAY);
      if(RARRAY_LEN(end) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
	  if(l_end < 0) {
	      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	      if(status != NC_NOERR) NC_RAISE(status);
	      l_end += dimlen;
	  }
	  c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
	  c_count_all=c_count[i]*c_count_all;
      }
      if(len == 1 && len != c_count_all){
	  scalar = *ptr;
	  ptr = ALLOCA_N(int,c_count_all);
	  for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
      } else if(len != c_count_all) {
	  rb_raise(rb_eNetcdfError, 
              "length of the array does not agree with that of the subset\n"); 
      }
  }

  status = nc_put_vars_int(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_vars_sfloat(NArray, start, end, stride) ⇒ Object



4233
4234
4235
4236
4237
4238
4239
4240
4241
4242
4243
4244
4245
4246
4247
4248
4249
4250
4251
4252
4253
4254
4255
4256
4257
4258
4259
4260
4261
4262
4263
4264
4265
4266
4267
4268
4269
4270
4271
4272
4273
4274
4275
4276
4277
4278
4279
4280
4281
4282
4283
4284
4285
4286
4287
4288
4289
4290
4291
4292
4293
4294
4295
4296
4297
4298
4299
4300
4301
4302
4303
4304
4305
4306
4307
4308
4309
4310
4311
4312
4313
4314
4315
4316
4317
4318
4319
4320
4321
4322
4323
4324
4325
4326
4327
4328
4329
4330
4331
4332
4333
4334
4335
4336
4337
# File 'ext/netcdfraw.c', line 4233

VALUE
NetCDF_put_vars_float(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  float *ptr,scalar;
  int len,i;
  int c_count_all=1;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int ndims;
  int   *shape;
  int   *dimids;
  size_t dimlen;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid, varid, dimids);
  if(status != NC_NOERR) NC_RAISE(status);

  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n"); 
  }
  c_start=ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
	status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_start += dimlen;
    }
    c_start[i]=l_start;
  }
  
  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_stride[i]=1;
      }
      break;
  default:
      Check_Type(stride,T_ARRAY);
      if(RARRAY_LEN(stride) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
	  if(c_stride[i]==0) {
	      rb_raise(rb_eNetcdfError, "stride cannot be zero\n"); 
	  }
      }
  }

  Array_to_Cfloat_len_shape(NArray,ptr,len,shape);

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_count[i]=shape[i];
      }
      c_count_all=len;
      break;
  default:
      Check_Type(end,T_ARRAY);
      if(RARRAY_LEN(end) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
	  if(l_end < 0) {
	      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	      if(status != NC_NOERR) NC_RAISE(status);
	      l_end += dimlen;
	  }
	  c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
	  c_count_all=c_count[i]*c_count_all;
      }
      if(len == 1 && len != c_count_all){
	  scalar = *ptr;
	  ptr = ALLOCA_N(float,c_count_all);
	  for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
      } else if(len != c_count_all) {
	  rb_raise(rb_eNetcdfError, 
              "lengh of the array does not agree with that of the subset\n"); 
      }
  }

  status = nc_put_vars_float(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_vars_sint(NArray, start, end, stride) ⇒ Object



4019
4020
4021
4022
4023
4024
4025
4026
4027
4028
4029
4030
4031
4032
4033
4034
4035
4036
4037
4038
4039
4040
4041
4042
4043
4044
4045
4046
4047
4048
4049
4050
4051
4052
4053
4054
4055
4056
4057
4058
4059
4060
4061
4062
4063
4064
4065
4066
4067
4068
4069
4070
4071
4072
4073
4074
4075
4076
4077
4078
4079
4080
4081
4082
4083
4084
4085
4086
4087
4088
4089
4090
4091
4092
4093
4094
4095
4096
4097
4098
4099
4100
4101
4102
4103
4104
4105
4106
4107
4108
4109
4110
4111
4112
4113
4114
4115
4116
4117
4118
4119
4120
4121
4122
4123
# File 'ext/netcdfraw.c', line 4019

VALUE
NetCDF_put_vars_sint(VALUE Var,VALUE NArray,VALUE start,VALUE end,VALUE stride)
{
  int ncid;
  int varid;
  int status;
  short *ptr,scalar;
  int len,i;
  int c_count_all=1;
  struct NetCDFVar *Netcdf_var;
  long l_start, l_end;
  size_t *c_start;
  size_t *c_count;
  ptrdiff_t *c_stride;
  int ndims;
  int   *shape;
  int   *dimids;
  size_t dimlen;

  rb_secure(4);
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;
  status = nc_inq_varndims(ncid, varid, &ndims);
  if(status != NC_NOERR) NC_RAISE(status);

  dimids=ALLOCA_N(int,ndims);
  status = nc_inq_vardimid(ncid, varid, dimids);
  if(status != NC_NOERR) NC_RAISE(status);

  Check_Type(start,T_ARRAY);
  if(RARRAY_LEN(start) < ndims) {
      rb_raise(rb_eNetcdfError, "Length of 'start' is too short\n"); 
  }
  c_start=ALLOCA_N(size_t,ndims);
  for(i=0; i<ndims; i++){
    l_start=NUM2INT(RARRAY_PTR(start)[ndims-1-i]);
    
    if(l_start < 0) {
	status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	if(status != NC_NOERR) NC_RAISE(status);
	l_start += dimlen;
    }
    c_start[i]=l_start;
  }
  
  c_stride=ALLOCA_N(ptrdiff_t,ndims);
  switch(TYPE(stride)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_stride[i]=1;
      }
      break;
  default:
      Check_Type(stride,T_ARRAY);
      if(RARRAY_LEN(stride) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'stride' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  c_stride[i]=NUM2INT(RARRAY_PTR(stride)[ndims-1-i]);
	  if(c_stride[i]==0) {
	      rb_raise(rb_eNetcdfError, "stride cannot be zero\n"); 
	  }
      }
  }

  Array_to_Csint_len_shape(NArray,ptr,len,shape);

  c_count=ALLOCA_N(size_t,ndims);
  switch(TYPE(end)){
  case T_NIL:
      for(i=0; i<ndims; i++){
	  c_count[i]=shape[i];
      }
      c_count_all=len;
      break;
  default:
      Check_Type(end,T_ARRAY);
      if(RARRAY_LEN(end) < ndims) {
	  rb_raise(rb_eNetcdfError, "Length of 'end' is too short\n"); 
      }
      for(i=0; i<ndims; i++){
	  l_end=NUM2INT(RARRAY_PTR(end)[ndims-1-i]);
	  if(l_end < 0) {
	      status = nc_inq_dimlen(ncid, dimids[i], &dimlen);
	      if(status != NC_NOERR) NC_RAISE(status);
	      l_end += dimlen;
	  }
	  c_count[i]=(l_end-c_start[i])/c_stride[i]+1;
	  c_count_all=c_count[i]*c_count_all;
      }
      if(len == 1 && len != c_count_all){
	  scalar = *ptr;
	  ptr = ALLOCA_N(short,c_count_all);
	  for(i=0;i<c_count_all;i++){ptr[i]=scalar;}
      } else if(len != c_count_all) {
	  rb_raise(rb_eNetcdfError, 
              "lengh of the array does not agree with that of the subset\n"); 
      }
  }

  status = nc_put_vars_short(ncid,varid,c_start,c_count,c_stride,ptr);
  if(status != NC_NOERR) NC_RAISE(status);
  return Qnil;
}

#put_with_miss(data, *args) ⇒ Object



45
46
47
48
49
50
51
52
53
54
55
56
# File 'lib/numru/netcdf_miss.rb', line 45

def put_with_miss(data, *args)
  if data.is_a?( NArrayMiss )
	__interpret_missing_params if !defined?(@missval)
	if @missval
	  simple_put(data.to_na(@missval), *args)
	else
	  simple_put(data.to_na, *args)
	end
  else
	simple_put(data, *args)
  end
end

#put_with_miss_and_scaling(data, *args) ⇒ Object



58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
# File 'lib/numru/netcdf_miss.rb', line 58

def put_with_miss_and_scaling(data, *args)
  if data.is_a?( NArrayMiss )
	__interpret_missing_params if !defined?(@missval)
	if @missval
	  data = pack( data )
	  data = data.to_na(@missval)
	else
	  data = pack( data )
	  data = data.to_na
	end
	simple_put(data, *args)
  else
	scaled_put(data, *args)
  end
end

#scaled_get(hash = nil) ⇒ Object



378
379
380
# File 'lib/numru/netcdf.rb', line 378

def scaled_get(hash=nil)
  unpack( simple_get(hash) )
end

#scaled_put(var, hash = nil) ⇒ Object



325
326
327
# File 'lib/numru/netcdf.rb', line 325

def scaled_put(var,hash=nil)
  simple_put( pack(var), hash)
end

#shape_currentObject



279
280
281
282
283
284
285
# File 'lib/numru/netcdf.rb', line 279

def shape_current
   sh = []
   dims.each{|d|
	 sh.push(d.length)
   }
   sh
end

#shape_ul0Object



267
268
269
270
271
272
273
274
275
276
277
# File 'lib/numru/netcdf.rb', line 267

def shape_ul0
   sh = []
   dims.each{|d|
	 if d.unlimited? then
  sh.push(0)
	 else
  sh.push(d.length)
	 end
   }
   sh
end

#simple_get(hash = nil) ⇒ Object Also known as: get



488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
# File 'lib/numru/netcdf.rb', line 488

def simple_get(hash=nil)
  t_var = self.vartype
  if hash == nil
    if t_var == "char"
	 get_var_char
    elsif t_var == "byte"
	 get_var_byte
    elsif t_var == "sint"
	 get_var_sint
    elsif t_var == "int"
	 get_var_int
    elsif t_var == "sfloat"
	 get_var_sfloat
    elsif t_var == "float"
	 get_var_float
    else
raise NetcdfError, "variable type #{t_var} isn't supported in netCDF"
    end
  elsif hash.key?("index")==true
    ind = hash["index"]
    if t_var == "char"
	 get_var1_char(ind)
    elsif t_var == "byte"
	 get_var1_byte(ind)
    elsif t_var == "sint"
	 get_var1_sint(ind)
    elsif t_var == "int"
	 get_var1_int(ind)
    elsif t_var == "sfloat"
	 get_var1_sfloat(ind)
    elsif t_var == "float"
	 get_var1_float(ind)
    else
	 raise NetcdfError,"variable type #{t_var} isn't supported in netCDF"
    end
  elsif hash.key?("start")==true
    h_sta = hash["start"]
    endq = hash.key?("end")
    strq = hash.key?("stride")
    if endq == false && strq == false
	 if t_var == "char"
 get_vars_char(h_sta,nil,nil)
	 elsif t_var == "byte"
 get_vars_byte(h_sta,nil,nil)
	 elsif t_var == "sint" 
 get_vars_sint(h_sta,nil,nil)
	 elsif t_var == "int"
 get_vars_int(h_sta,nil,nil)
	 elsif t_var == "sfloat"
 get_vars_sfloat(h_sta,nil,nil)
	 elsif t_var == "float"
 get_vars_float(h_sta,nil,nil)
	 else 
 raise NetcdfError, "varialbe type #{t_var} isn't supported in netCDF"
	 end
    elsif endq == true && strq == false
	 h_end = hash["end"]
if t_var == "char"
 get_vars_char(h_sta,h_end,nil)
elsif t_var == "byte"
 get_vars_byte(h_sta,h_end,nil)
	 elsif t_var == "sint"
 get_vars_sint(h_sta,h_end,nil)
	 elsif t_var == "int"
 get_vars_int(h_sta,h_end,nil)
	 elsif t_var == "sfloat"
 get_vars_sfloat(h_sta,h_end,nil)
	 elsif t_var == "float"
 get_vars_float(h_sta,h_end,nil)
	 else
 raise NetcdfError, "variable type #{t_var} isn't supported in netCDF"
	 end
    elsif endq == false && strq == true
	 h_str = hash["stride"]
if t_var == "char"
 get_vars_char(h_sta,nil,h_str)
elsif t_var == "byte"
 get_vars_byte(h_sta,nil,h_str)
	 elsif t_var == "sint"
 get_vars_sint(h_sta,nil,h_str)
	 elsif t_var == "int"
 get_vars_int(h_sta,nil,h_str)
	 elsif t_var == "sfloat"
 get_vars_sfloat(h_sta,nil,h_str)
	 elsif t_var == "float"
 get_vars_float(h_sta,nil,h_str)
	 else
 raise NetcdfError, "variable type #{t_var} isn't supported in netCDF"
	 end
    else endq == true && strq == true
	 h_end = hash["end"]
	 h_str = hash["stride"]
	 if t_var == "char"
 get_vars_char(h_sta,h_end,h_str)
	 elsif t_var == "byte"
 get_vars_byte(h_sta,h_end,h_str)
	 elsif t_var == "sint"
 get_vars_sint(h_sta,h_end,h_str)
	 elsif t_var == "int"
 get_vars_int(h_sta,h_end,h_str)
	 elsif t_var == "sfloat"
 get_vars_sfloat(h_sta,h_end,h_str)
	 elsif t_var == "float"
 get_vars_float(h_sta,h_end,h_str)
	 else
 raise NetcdfError, "variable type #{t_var} isn't supported in netCDF"
	 end
    end
  else
    raise ArgumentError,"{'start'}=>{ARRAY} or {'index'}=>{ARRAY} is needed"
  end
end

#simple_put(var, hash = nil) ⇒ Object Also known as: put



382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
# File 'lib/numru/netcdf.rb', line 382

def simple_put(var,hash=nil)
  if hash==nil
    if self.vartype == "char"
	 put_var_char(var)
    elsif self.vartype == "byte"
	 put_var_byte(var)
    elsif self.vartype == "sint"
	 put_var_sint(var)
    elsif self.vartype == "int"
	 put_var_int(var)
    elsif self.vartype == "sfloat"
	 put_var_sfloat(var)
    elsif self.vartype == "float"
	 put_var_float(var)
    else 
	 raise NetcdfError,"variable type isn't supported in netCDF" 
    end
  elsif hash.key?("index")==true 
    if self.vartype == "char"
	 put_var1_char(var,hash["index"])
    elsif self.vartype=="byte"
	 put_var1_byte(var,hash["index"])
    elsif self.vartype=="sint"
	 put_var1_sint(var,hash["index"])
    elsif self.vartype == "int"
	 put_var1_int(var,hash["index"])
    elsif self.vartype == "sfloat"
	 put_var1_sfloat(var,hash["index"])
    elsif self.vartype == "float"
	 put_var1_float(var,hash["index"])
    else 
	 raise NetcdfError,"variable type isn't supported in netCDF"
    end
  elsif hash.key?("start")==true
    if hash.key?("end")==false && hash.key?("stride")==false
	 if self.vartype == "char"
 put_vars_char(var,hash["start"],nil,nil)
	 elsif self.vartype=="byte"
 put_vars_byte(var,hash["start"],nil,nil)
	 elsif self.vartype=="sint"
 put_vars_sint(var,hash["start"],nil,nil)
	 elsif self.vartype=="int"
 put_vars_int(var,hash["start"],nil,nil)
	 elsif self.vartype=="sfloat"
 put_vars_sfloat(var,hash["start"],nil,nil)
	 elsif self.vartype=="float"
 put_vars_float(var,hash["start"],nil,nil)
	 else
 raise NetcdfError, "variable type isn't supported in netCDF"
	 end
    elsif hash.key?("end")==true && hash.key?("stride") == false
	 if self.vartype == "char"
 put_vars_char(var,hash["start"],hash["end"],nil)
	 elsif self.vartype=="byte"
 put_vars_byte(var,hash["start"],hash["end"],nil)
	 elsif self.vartype=="sint"
 put_vars_sint(var,hash["start"],hash["end"],nil)
	 elsif self.vartype=="int"
 put_vars_int(var,hash["start"],hash["end"],nil)
	 elsif self.vartype == "sfloat"
 put_vars_sfloat(var,hash["start"],hash["end"],nil)
	 elsif self.vartype =="float"
 put_vars_float(var,hash["start"],hash["end"],nil)
	 else
 raise NetcdfError, "variable type isn't supported in netCDF"
	 end
    elsif hash.key?("end")==false && hash.key?("stride")==true
	 if self.vartype == "char"
 put_vars_char(var,hash["start"],nil,hash["stride"])
	 elsif self.vartype=="byte"
 put_vars_byte(var,hash["start"],nil,hash["stride"])
	 elsif self.vartype=="sint"
 put_vars_sint(var,hash["start"],nil,hash["stride"])
	 elsif self.vartype=="int"
 put_vars_int(var,hash["start"],nil,hash["stride"])
	 elsif self.vartype=="sfloat"
 put_vars_sfloat(var,hash["start"],nil,hash["stride"])
	 elsif self.vartype=="float"
 put_vars_float(var,hash["start"],nil,hash["stride"])
	 else
 raise NetcdfError, "variable type isn't supported in netCDF"
	 end
    else hash.key?("end")==true && hash.key?("stride")==true
	 if self.vartype == "char"
 put_vars_char(var,hash["start"],hash["end"],hash["stride"])
	 elsif self.vartype=="byte"
 put_vars_byte(var,hash["start"],hash["end"],hash["stride"])
	 elsif self.vartype=="sint"
 put_vars_sint(var,hash["start"],hash["end"],hash["stride"])
	 elsif self.vartype=="int"
 put_vars_int(var,hash["start"],hash["end"],hash["stride"])
	 elsif self.vartype=="sfloat"
 put_vars_sfloat(var,hash["start"],hash["end"],hash["stride"])
	 elsif self.vartype=="float"
 put_vars_float(var,hash["start"],hash["end"],hash["stride"])
	 else
 raise NetcdfError, "variable type isn't supported in netCDF"
	 end
    end
  else
    raise ArgumentError,"{'start'}=>[ARRAY] or {'index'}=>[ARRAY] is needed"
  end
end

#typecodeObject



1728
1729
1730
1731
1732
1733
1734
1735
1736
1737
1738
1739
1740
1741
1742
1743
1744
1745
1746
# File 'ext/netcdfraw.c', line 1728

VALUE
NetCDF_var_typecode(VALUE Var)
{
  int ncid;
  int status;
  int varid;
  nc_type xtypep;
  struct NetCDFVar *Netcdf_var;
  
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  status = nc_inq_vartype(ncid,varid,&xtypep);
  if(status != NC_NOERR) NC_RAISE(status);
  
  return(INT2NUM(nctype2natypecode(xtypep)));
}

#unpack(na) ⇒ Object



345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
# File 'lib/numru/netcdf.rb', line 345

def unpack(na)
  sf = att('scale_factor')
  ao = att('add_offset')
  if ( sf == nil && ao == nil ) then
    na
  else
    if sf
	 csf = sf.get
	 raise NetcdfError,"scale_factor is not a numeric" if csf.is_a?(String)
	 raise NetcdfError, "scale_factor is not unique" if csf.length != 1
	 raise NetcdfError, "zero scale_factor" if csf[0] == 0
    else
	 csf =nil
    end
    if ao
	 cao = ao.get
	 raise NetcdfError, "add_offset is not a numeric" if cao.is_a?(String)
	 raise NetcdfError, "add_offset is not unique" if cao.length != 1
    else
	 cao = nil
    end
    if csf and cao
	 una = na * csf + cao  # csf & cao are NArray -> coerced to their types
    elsif csf
	 una = na * csf
    elsif cao
	 una = na + cao
    end
    una = una.to_type(@@unpack_type) if @@unpack_type
    una
  end
end

#vartypeObject



1706
1707
1708
1709
1710
1711
1712
1713
1714
1715
1716
1717
1718
1719
1720
1721
1722
1723
1724
1725
1726
# File 'ext/netcdfraw.c', line 1706

VALUE
NetCDF_var_vartype(VALUE Var)
{
  int ncid;
  int status;
  int varid;
  nc_type xtypep;
  struct NetCDFVar *Netcdf_var;
  const char *Vartype;
  
  Data_Get_Struct(Var,struct NetCDFVar,Netcdf_var);
  
  ncid=Netcdf_var->ncid;
  varid=Netcdf_var->varid;

  status = nc_inq_vartype(ncid,varid,&xtypep);
  if(status != NC_NOERR) NC_RAISE(status);
  
  Vartype=nctype2natype(xtypep);
  return(rb_str_new2(Vartype));
}