Exception: GeneValidatorApp::NO_PROTEIN_BLAST_DATABASE_FOUND

Inherits:

StandardError

• Object
• StandardError
• GeneValidatorApp::NO_PROTEIN_BLAST_DATABASE_FOUND

Defined in:

lib/genevalidatorapp/exceptions.rb

Overview

Raised if no protein BLAST+ database was found in database_dir.

Instance Attribute Summary

• #database_dir ⇒ Object readonly

  Returns the value of attribute database_dir.

Instance Method Summary

• #initialize(database_dir) ⇒ NO_PROTEIN_BLAST_DATABASE_FOUND constructor

  A new instance of NO_PROTEIN_BLAST_DATABASE_FOUND.

• #to_s ⇒ Object

Constructor Details

#initialize(database_dir) ⇒ NO_PROTEIN_BLAST_DATABASE_FOUND

Returns a new instance of NO_PROTEIN_BLAST_DATABASE_FOUND.

# File 'lib/genevalidatorapp/exceptions.rb', line 153

def initialize(database_dir)
  @database_dir = database_dir
end

Instance Attribute Details

#database_dir ⇒ Object (readonly)

Returns the value of attribute database_dir.

# File 'lib/genevalidatorapp/exceptions.rb', line 157

def database_dir
  @database_dir
end

Instance Method Details

#to_s ⇒ Object

# File 'lib/genevalidatorapp/exceptions.rb', line 159

def to_s
  "Could not find any Protein BLAST+ databases in: #{database_dir}."
end