Class: FHIR::R5::GenomicStudy::Analysis

Inherits:
Model
  • Object
show all
Includes:
Hashable, Json, Xml
Defined in:
lib/fhir_models/r5/generated/resources/GenomicStudy.rb

Defined Under Namespace

Classes: Device, Input, Output, Performer

Constant Summary collapse

METADATA = 
{
  'id' => {'type'=>'string', 'path'=>'Analysis.id', 'min'=>0, 'max'=>1},
  'extension' => {'type'=>'Extension', 'path'=>'Analysis.extension', 'min'=>0, 'max'=>Float::INFINITY},
  'modifierExtension' => {'type'=>'Extension', 'path'=>'Analysis.modifierExtension', 'min'=>0, 'max'=>Float::INFINITY},
  'identifier' => {'type'=>'Identifier', 'path'=>'Analysis.identifier', 'min'=>0, 'max'=>Float::INFINITY},
  'methodType' => {'valid_codes'=>{'http://hl7.org/fhir/genomicstudy-methodtype'=>['biochemical-genetics', 'cytogenetics', 'molecular-genetics', 'analyte', 'chromosome-breakage-studies', 'deletion-duplication-analysis', 'detection-of-homozygosity', 'enzyme-assay', 'fish-interphase', 'fish-metaphase', 'flow-cytometry', 'fish', 'immunohistochemistry', 'karyotyping', 'linkage-analysis', 'methylation-analysis', 'msi', 'm-fish', 'mutation-scanning-of-select-exons', 'mutation-scanning-of-the-entire-coding-region', 'protein-analysis', 'protein-expression', 'rna-analysis', 'sequence-analysis-of-select-exons', 'sequence-analysis-of-the-entire-coding-region', 'sister-chromatid-exchange', 'targeted-variant-analysis', 'udp', 'aspe', 'alternative-splicing-detection', 'bi-directional-sanger-sequence-analysis', 'c-banding', 'cia', 'chromatin-immunoprecipitation-on-chip', 'comparative-genomic-hybridization', 'damid', 'digital-virtual-karyotyping', 'digital-microfluidic-microspheres', 'enzymatic-levels', 'enzyme-activity', 'elisa', 'fluorometry', 'fusion-genes-microarrays', 'g-banding', 'gc-ms', 'gene-expression-profiling', 'gene-id', 'gold-nanoparticle-probe-technology', 'hplc', 'lc-ms', 'lc-ms-ms', 'metabolite-levels', 'methylation-specific-pcr', 'microarray', 'mlpa', 'ngs-mps', 'ola', 'oligonucleotide-hybridization-based-dna-sequencing', 'other', 'pcr', 'pcr-with-allele-specific-hybridization', 'pcr-rflp-with-southern-hybridization', 'protein-truncation-test', 'pyrosequencing', 'q-banding', 'qpcr', 'r-banding', 'rflp', 'rt-lamp', 'rt-pcr', 'rt-pcr-with-gel-analysis', 'rt-qpcr', 'snp-detection', 'silver-staining', 'sky', 't-banding', 'ms-ms', 'tetra-nucleotide-repeat-by-pcr-or-southern-blot', 'tiling-arrays', 'trinucleotide-repeat-by-pcr-or-southern-blot', 'uni-directional-sanger-sequencing']}, 'type'=>'CodeableConcept', 'path'=>'Analysis.methodType', 'min'=>0, 'max'=>Float::INFINITY, 'binding'=>{'strength'=>'example', 'uri'=>'http://hl7.org/fhir/ValueSet/genomicstudy-methodtype'}},
  'changeType' => {'valid_codes'=>{'http://hl7.org/fhir/genomicstudy-changetype'=>['DNA', 'RNA', 'AA', 'CHR', 'CNV']}, 'type'=>'CodeableConcept', 'path'=>'Analysis.changeType', 'min'=>0, 'max'=>Float::INFINITY, 'binding'=>{'strength'=>'example', 'uri'=>'http://hl7.org/fhir/ValueSet/genomicstudy-changetype'}},
  'genomeBuild' => {'type'=>'CodeableConcept', 'path'=>'Analysis.genomeBuild', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'extensible', 'uri'=>'http://loinc.org/vs/LL1040-6'}},
  'instantiatesCanonical' => {'type'=>'canonical', 'path'=>'Analysis.instantiatesCanonical', 'min'=>0, 'max'=>1},
  'instantiatesUri' => {'type'=>'uri', 'path'=>'Analysis.instantiatesUri', 'min'=>0, 'max'=>1},
  'title' => {'type'=>'string', 'path'=>'Analysis.title', 'min'=>0, 'max'=>1},
  'focus' => {'type_profiles'=>['http://hl7.org/fhir/StructureDefinition/Resource'], 'type'=>'Reference', 'path'=>'Analysis.focus', 'min'=>0, 'max'=>Float::INFINITY},
  'specimen' => {'type_profiles'=>['http://hl7.org/fhir/StructureDefinition/Specimen'], 'type'=>'Reference', 'path'=>'Analysis.specimen', 'min'=>0, 'max'=>Float::INFINITY},
  'date' => {'type'=>'dateTime', 'path'=>'Analysis.date', 'min'=>0, 'max'=>1},
  'note' => {'type'=>'Annotation', 'path'=>'Analysis.note', 'min'=>0, 'max'=>Float::INFINITY},
  'protocolPerformed' => {'type_profiles'=>['http://hl7.org/fhir/StructureDefinition/Procedure', 'http://hl7.org/fhir/StructureDefinition/Task'], 'type'=>'Reference', 'path'=>'Analysis.protocolPerformed', 'min'=>0, 'max'=>1},
  'regionsStudied' => {'type_profiles'=>['http://hl7.org/fhir/StructureDefinition/DocumentReference', 'http://hl7.org/fhir/StructureDefinition/Observation'], 'type'=>'Reference', 'path'=>'Analysis.regionsStudied', 'min'=>0, 'max'=>Float::INFINITY},
  'regionsCalled' => {'type_profiles'=>['http://hl7.org/fhir/StructureDefinition/DocumentReference', 'http://hl7.org/fhir/StructureDefinition/Observation'], 'type'=>'Reference', 'path'=>'Analysis.regionsCalled', 'min'=>0, 'max'=>Float::INFINITY},
  'input' => {'type'=>'GenomicStudy::Analysis::Input', 'path'=>'Analysis.input', 'min'=>0, 'max'=>Float::INFINITY},
  'output' => {'type'=>'GenomicStudy::Analysis::Output', 'path'=>'Analysis.output', 'min'=>0, 'max'=>Float::INFINITY},
  'performer' => {'type'=>'GenomicStudy::Analysis::Performer', 'path'=>'Analysis.performer', 'min'=>0, 'max'=>Float::INFINITY},
  'device' => {'type'=>'GenomicStudy::Analysis::Device', 'path'=>'Analysis.device', 'min'=>0, 'max'=>Float::INFINITY}
}

Constants included from FHIR::R4

FHIR::R4::PRIMITIVES, FHIR::R4::RESOURCES, FHIR::R4::TYPES

Constants included from FHIR

Account, ActivityDefinition, Address, AdverseEvent, Age, AllergyIntolerance, Annotation, Appointment, AppointmentResponse, Attachment, AuditEvent, BackboneElement, Basic, Binary, BiologicallyDerivedProduct, BodyStructure, Bundle, CapabilityStatement, CarePlan, CareTeam, CatalogEntry, ChargeItem, ChargeItemDefinition, Claim, ClaimResponse, ClinicalImpression, CodeSystem, CodeableConcept, Coding, Communication, CommunicationRequest, CompartmentDefinition, Composition, ConceptMap, Condition, Consent, ContactDetail, ContactPoint, Contract, Contributor, Count, Coverage, CoverageEligibilityRequest, CoverageEligibilityResponse, DataRequirement, Definitions, DetectedIssue, Device, DeviceDefinition, DeviceMetric, DeviceRequest, DeviceUseStatement, DiagnosticReport, Distance, DocumentManifest, DocumentReference, DomainResource, Dosage, Duration, EffectEvidenceSynthesis, Element, ElementDefinition, Encounter, Endpoint, EnrollmentRequest, EnrollmentResponse, EpisodeOfCare, EventDefinition, Evidence, EvidenceVariable, ExampleScenario, ExplanationOfBenefit, Expression, Extension, FamilyMemberHistory, Flag, Goal, GraphDefinition, Group, GuidanceResponse, HealthcareService, HumanName, Identifier, ImagingStudy, Immunization, ImmunizationEvaluation, ImmunizationRecommendation, ImplementationGuide, InsurancePlan, Invoice, Library, Linkage, List, Location, MarketingStatus, Measure, MeasureReport, Media, Medication, MedicationAdministration, MedicationDispense, MedicationKnowledge, MedicationRequest, MedicationStatement, MedicinalProduct, MedicinalProductAuthorization, MedicinalProductContraindication, MedicinalProductIndication, MedicinalProductIngredient, MedicinalProductInteraction, MedicinalProductManufactured, MedicinalProductPackaged, MedicinalProductPharmaceutical, MedicinalProductUndesirableEffect, MessageDefinition, MessageHeader, Meta, MolecularSequence, Money, NamingSystem, Narrative, NutritionOrder, Observation, ObservationDefinition, OperationDefinition, OperationOutcome, Organization, OrganizationAffiliation, PRIMITIVES, ParameterDefinition, Parameters, Patient, PaymentNotice, PaymentReconciliation, Period, Person, PlanDefinition, Population, Practitioner, PractitionerRole, Procedure, ProdCharacteristic, ProductShelfLife, Provenance, Quantity, Questionnaire, QuestionnaireResponse, FHIR::RESOURCES, FHIR::Range, FHIR::Ratio, FHIR::Reference, FHIR::RelatedArtifact, FHIR::RelatedPerson, FHIR::RequestGroup, FHIR::ResearchDefinition, FHIR::ResearchElementDefinition, FHIR::ResearchStudy, FHIR::ResearchSubject, FHIR::Resource, FHIR::RiskAssessment, FHIR::RiskEvidenceSynthesis, SampledData, Schedule, SearchParameter, ServiceRequest, Signature, Slot, Specimen, SpecimenDefinition, StructureDefinition, StructureDefinitionCompare, StructureMap, Subscription, Substance, SubstanceAmount, SubstanceNucleicAcid, SubstancePolymer, SubstanceProtein, SubstanceReferenceInformation, SubstanceSourceMaterial, SubstanceSpecification, SupplyDelivery, SupplyRequest, TYPES, Task, TerminologyCapabilities, TestReport, TestScript, Timing, TriggerDefinition, UsageContext, ValueSet, VerificationResult, VisionPrescription

Constants included from FHIR::R5

PRIMITIVES, RESOURCES, TYPES

Instance Attribute Summary collapse

Method Summary

Methods included from FHIR::R4

#fhir_version_string, #versioned_fhir_module

Methods included from FHIR

default_logger, fhir_version_string, logger, logger=, primitive?, versioned_fhir_module

Methods included from ClassMethods

#from_contents

Methods included from ClassXml

#from_xml, #valid?, #validate, #xml_node_to_hash

Methods included from InstanceXml

#hash_to_xml_node, #to_xml

Methods included from ClassJson

#from_json

Methods included from InstanceJson

#to_json

Methods included from Hashable

#from_hash, #to_hash

Methods included from FHIR::R5

#fhir_version_string, #versioned_fhir_module

Methods inherited from Model

#==, #attribute_mismatch, #compare_attribute, #each_element, #equals?, #hash, #initialize, #method_missing, #mismatch, #primitive?, #respond_to_missing?, #to_reference, #valid?, #validate, #validate_profile

Methods included from Deprecate

#deprecate

Constructor Details

This class inherits a constructor from FHIR::Model

Dynamic Method Handling

This class handles dynamic methods through the method_missing method in the class FHIR::Model

Instance Attribute Details

#changeType ⇒ Object

0-* [ CodeableConcept ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 156

def changeType
  @changeType
end

#date ⇒ Object

0-1 dateTime



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 163

def date
  @date
end

#device ⇒ Object

0-* [ GenomicStudy::Analysis::Device ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 171

def device
  @device
end

#extension ⇒ Object

0-* [ Extension ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 152

def extension
  @extension
end

#focus ⇒ Object

0-* [ Reference(Resource) ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 161

def focus
  @focus
end

#genomeBuild ⇒ Object

0-1 CodeableConcept



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 157

def genomeBuild
  @genomeBuild
end

#id ⇒ Object

0-1 string



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 151

def id
  @id
end

#identifier ⇒ Object

0-* [ Identifier ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 154

def identifier
  @identifier
end

#input ⇒ Object

0-* [ GenomicStudy::Analysis::Input ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 168

def input
  @input
end

#instantiatesCanonical ⇒ Object

0-1 canonical



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 158

def instantiatesCanonical
  @instantiatesCanonical
end

#instantiatesUri ⇒ Object

0-1 uri



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 159

def instantiatesUri
  @instantiatesUri
end

#methodType ⇒ Object

0-* [ CodeableConcept ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 155

def methodType
  @methodType
end

#modifierExtension ⇒ Object

0-* [ Extension ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 153

def modifierExtension
  @modifierExtension
end

#note ⇒ Object

0-* [ Annotation ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 164

def note
  @note
end

#output ⇒ Object

0-* [ GenomicStudy::Analysis::Output ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 169

def output
  @output
end

#performer ⇒ Object

0-* [ GenomicStudy::Analysis::Performer ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 170

def performer
  @performer
end

#protocolPerformed ⇒ Object

0-1 Reference(Procedure|Task)



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 165

def protocolPerformed
  @protocolPerformed
end

#regionsCalled ⇒ Object

0-* [ Reference(DocumentReference|Observation) ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 167

def regionsCalled
  @regionsCalled
end

#regionsStudied ⇒ Object

0-* [ Reference(DocumentReference|Observation) ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 166

def regionsStudied
  @regionsStudied
end

#specimen ⇒ Object

0-* [ Reference(Specimen) ]



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 162

def specimen
  @specimen
end

#title ⇒ Object

0-1 string



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# File 'lib/fhir_models/r5/generated/resources/GenomicStudy.rb', line 160

def title
  @title
end