Class: FHIR::R4::MolecularSequence::Quality

Inherits:
FHIR::R4::Model show all
Includes:
Hashable, Json, Xml
Defined in:
lib/fhir_models/r4/generated/resources/MolecularSequence.rb

Defined Under Namespace

Classes: Roc

Constant Summary collapse

METADATA = 
{
  'id' => {'type'=>'string', 'path'=>'Quality.id', 'min'=>0, 'max'=>1},
  'extension' => {'type'=>'Extension', 'path'=>'Quality.extension', 'min'=>0, 'max'=>Float::INFINITY},
  'modifierExtension' => {'type'=>'Extension', 'path'=>'Quality.modifierExtension', 'min'=>0, 'max'=>Float::INFINITY},
  'type' => {'valid_codes'=>{'http://hl7.org/fhir/quality-type'=>['indel', 'snp', 'unknown']}, 'type'=>'code', 'path'=>'Quality.type', 'min'=>1, 'max'=>1, 'binding'=>{'strength'=>'required', 'uri'=>'http://hl7.org/fhir/ValueSet/quality-type'}},
  'standardSequence' => {'type'=>'CodeableConcept', 'path'=>'Quality.standardSequence', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'example', 'uri'=>'http://hl7.org/fhir/ValueSet/sequence-quality-standardSequence'}},
  'start' => {'type'=>'integer', 'path'=>'Quality.start', 'min'=>0, 'max'=>1},
  'end' => {'type'=>'integer', 'path'=>'Quality.end', 'min'=>0, 'max'=>1},
  'score' => {'type'=>'Quantity', 'path'=>'Quality.score', 'min'=>0, 'max'=>1},
  'method' => {'local_name'=>'local_method', 'type'=>'CodeableConcept', 'path'=>'Quality.method', 'min'=>0, 'max'=>1, 'binding'=>{'strength'=>'example', 'uri'=>'http://hl7.org/fhir/ValueSet/sequence-quality-method'}},
  'truthTP' => {'type'=>'decimal', 'path'=>'Quality.truthTP', 'min'=>0, 'max'=>1},
  'queryTP' => {'type'=>'decimal', 'path'=>'Quality.queryTP', 'min'=>0, 'max'=>1},
  'truthFN' => {'type'=>'decimal', 'path'=>'Quality.truthFN', 'min'=>0, 'max'=>1},
  'queryFP' => {'type'=>'decimal', 'path'=>'Quality.queryFP', 'min'=>0, 'max'=>1},
  'gtFP' => {'type'=>'decimal', 'path'=>'Quality.gtFP', 'min'=>0, 'max'=>1},
  'precision' => {'type'=>'decimal', 'path'=>'Quality.precision', 'min'=>0, 'max'=>1},
  'recall' => {'type'=>'decimal', 'path'=>'Quality.recall', 'min'=>0, 'max'=>1},
  'fScore' => {'type'=>'decimal', 'path'=>'Quality.fScore', 'min'=>0, 'max'=>1},
  'roc' => {'type'=>'MolecularSequence::Quality::Roc', 'path'=>'Quality.roc', 'min'=>0, 'max'=>1}
}

Constants included from FHIR::R4

PRIMITIVES, RESOURCES, TYPES

Constants included from FHIR

Account, ActivityDefinition, Address, AdverseEvent, Age, AllergyIntolerance, Annotation, Appointment, AppointmentResponse, Attachment, AuditEvent, BackboneElement, Basic, Binary, BiologicallyDerivedProduct, BodyStructure, Bundle, CapabilityStatement, CarePlan, CareTeam, CatalogEntry, ChargeItem, ChargeItemDefinition, Claim, ClaimResponse, ClinicalImpression, CodeSystem, CodeableConcept, Coding, Communication, CommunicationRequest, CompartmentDefinition, Composition, ConceptMap, Condition, Consent, ContactDetail, ContactPoint, Contract, Contributor, Count, Coverage, CoverageEligibilityRequest, CoverageEligibilityResponse, DataRequirement, Definitions, DetectedIssue, Device, DeviceDefinition, DeviceMetric, DeviceRequest, DeviceUseStatement, DiagnosticReport, Distance, DocumentManifest, DocumentReference, DomainResource, Dosage, Duration, EffectEvidenceSynthesis, Element, ElementDefinition, Encounter, Endpoint, EnrollmentRequest, EnrollmentResponse, EpisodeOfCare, EventDefinition, Evidence, EvidenceVariable, ExampleScenario, ExplanationOfBenefit, Expression, Extension, FamilyMemberHistory, Flag, Goal, GraphDefinition, Group, GuidanceResponse, HealthcareService, HumanName, Identifier, ImagingStudy, Immunization, ImmunizationEvaluation, ImmunizationRecommendation, ImplementationGuide, InsurancePlan, Invoice, Library, Linkage, List, Location, MarketingStatus, Measure, MeasureReport, Media, Medication, MedicationAdministration, MedicationDispense, MedicationKnowledge, MedicationRequest, MedicationStatement, MedicinalProduct, MedicinalProductAuthorization, MedicinalProductContraindication, MedicinalProductIndication, MedicinalProductIngredient, MedicinalProductInteraction, MedicinalProductManufactured, MedicinalProductPackaged, MedicinalProductPharmaceutical, MedicinalProductUndesirableEffect, MessageDefinition, MessageHeader, Meta, MolecularSequence, Money, NamingSystem, Narrative, NutritionOrder, Observation, ObservationDefinition, OperationDefinition, OperationOutcome, Organization, OrganizationAffiliation, PRIMITIVES, ParameterDefinition, Parameters, Patient, PaymentNotice, PaymentReconciliation, Period, Person, PlanDefinition, Population, Practitioner, PractitionerRole, Procedure, ProdCharacteristic, ProductShelfLife, Provenance, Quantity, Questionnaire, QuestionnaireResponse, FHIR::RESOURCES, FHIR::Range, FHIR::Ratio, FHIR::Reference, FHIR::RelatedArtifact, FHIR::RelatedPerson, FHIR::RequestGroup, FHIR::ResearchDefinition, FHIR::ResearchElementDefinition, FHIR::ResearchStudy, FHIR::ResearchSubject, FHIR::Resource, FHIR::RiskAssessment, FHIR::RiskEvidenceSynthesis, SampledData, Schedule, SearchParameter, ServiceRequest, Signature, Slot, Specimen, SpecimenDefinition, StructureDefinition, StructureDefinitionCompare, StructureMap, Subscription, Substance, SubstanceAmount, SubstanceNucleicAcid, SubstancePolymer, SubstanceProtein, SubstanceReferenceInformation, SubstanceSourceMaterial, SubstanceSpecification, SupplyDelivery, SupplyRequest, TYPES, Task, TerminologyCapabilities, TestReport, TestScript, Timing, TriggerDefinition, UsageContext, ValueSet, VerificationResult, VisionPrescription

Instance Attribute Summary collapse

Method Summary

Methods included from FHIR::R4

#fhir_version_string, #versioned_fhir_module

Methods included from FHIR

default_logger, fhir_version_string, logger, logger=, primitive?, versioned_fhir_module

Methods included from ClassMethods

#from_contents

Methods included from ClassXml

#from_xml, #valid?, #validate, #xml_node_to_hash

Methods included from InstanceXml

#hash_to_xml_node, #to_xml

Methods included from ClassJson

#from_json

Methods included from InstanceJson

#to_json

Methods included from Hashable

#from_hash, #to_hash

Methods inherited from Model

#==, #attribute_mismatch, #compare_attribute, #each_element, #equals?, #hash, #initialize, #method_missing, #mismatch, #primitive?, #respond_to_missing?, #to_reference, #valid?, #validate, #validate_profile

Methods included from Deprecate

#deprecate

Constructor Details

This class inherits a constructor from FHIR::Model

Dynamic Method Handling

This class handles dynamic methods through the method_missing method in the class FHIR::Model

Instance Attribute Details

#end ⇒ Object

0-1 integer



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 160

def end
  @end
end

#extension ⇒ Object

0-* [ Extension ]



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 155

def extension
  @extension
end

#fScore ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 170

def fScore
  @fScore
end

#gtFP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 167

def gtFP
  @gtFP
end

#id ⇒ Object

0-1 string



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 154

def id
  @id
end

#local_method ⇒ Object

0-1 CodeableConcept



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 162

def local_method
  @local_method
end

#modifierExtension ⇒ Object

0-* [ Extension ]



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 156

def modifierExtension
  @modifierExtension
end

#precision ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 168

def precision
  @precision
end

#queryFP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 166

def queryFP
  @queryFP
end

#queryTP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 164

def queryTP
  @queryTP
end

#recall ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 169

def recall
  @recall
end

#roc ⇒ Object

0-1 MolecularSequence::Quality::Roc



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 171

def roc
  @roc
end

#score ⇒ Object

0-1 Quantity



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 161

def score
  @score
end

#standardSequence ⇒ Object

0-1 CodeableConcept



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 158

def standardSequence
  @standardSequence
end

#start ⇒ Object

0-1 integer



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 159

def start
  @start
end

#truthFN ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 165

def truthFN
  @truthFN
end

#truthTP ⇒ Object

0-1 decimal



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 163

def truthTP
  @truthTP
end

#type ⇒ Object

1-1 code



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# File 'lib/fhir_models/r4/generated/resources/MolecularSequence.rb', line 157

def type
  @type
end