Module: ScientificNameClean
- Includes:
- Treetop::Runtime
- Included in:
- ScientificNameCanonical, ScientificNameCleanParser, ScientificNameDirty
- Defined in:
- lib/biodiversity/parser/scientific_name_clean.rb
Defined Under Namespace
Modules: AuthorName0, AuthorName1, AuthorName2, AuthorName3, AuthorPrefixWord0, AuthorPrefixWord1, AuthorSeparator0, AuthorWord0, AuthorWord1, AuthorWord2, AuthorWord3, AuthorWord4, AuthorWord5, AuthorsNames0, AuthorsNames1, Authorship0, Authorship1, Authorship2, Authorship3, Authorship4, Authorship5, BasionymAuthorshipWithParenthesis0, BasionymAuthorshipWithParenthesis1, BasionymAuthorshipWithParenthesis2, BasionymAuthorshipWithParenthesis3, BasionymAuthorshipWithParenthesis4, BasionymAuthorshipWithParenthesis5, BasionymAuthorshipWithParenthesis6, BasionymAuthorshipWithParenthesis7, CapDigraph0, CapDigraph1, CapLatinWord0, CapLatinWord1, CapLatinWord2, CapLatinWord3, CapLatinWord4, Digraph0, Digraph1, ExAuthorship0, ExAuthorship1, ExSep0, FullNameLetters0, FullNameLetters1, FullNameLetters2, FullNameLetters3, Genus0, Genus1, Genus2, HybridCharacter0, Infraspecies0, Infraspecies1, InfraspeciesEpitheton0, InfraspeciesEpitheton1, InfraspeciesEpitheton2, InfraspeciesEpitheton3, InfraspeciesMult0, InfraspeciesMult1, InfraspeciesMult2, LatinWord0, LatinWord1, LatinWord2, LatinWord3, MultinomialName0, MultinomialName1, MultinomialName2, MultinomialName3, MultinomialName4, MultinomialName5, MultinomialName6, MultinomialName7, MultiplicationSign0, Rank0, RankForma0, Root0, Root1, ScientificName20, ScientificName21, ScientificName30, ScientificName31, ScientificName40, ScientificName41, ScientificName42, ScientificName43, ScientificName50, ScientificName51, SimpleAuthorship0, SimpleAuthorship1, SimpleAuthorship2, SimpleAuthorship3, SimpleAuthorship4, Species0, Species1, SpeciesEpitheton0, SpeciesEpitheton1, SpeciesEpitheton2, SpeciesEpitheton3, SpeciesPrefix0, SpeciesWord0, SpeciesWord1, SpeciesWordHybrid0, SpeciesWordHybrid1, SpeciesWordHybrid2, SpeciesWordHybrid3, SpeciesWordHybrid4, SpeciesWordHybrid5, StatusPart0, StatusPart1, StatusWord0, StatusWord1, Subgenus0, Subgenus1, TaxonConceptRank0, UninomialEpitheton0, UninomialName0, UninomialName1, UnknownAuth0, ValidNameLetters0, Year0, Year1, YearNumber0, YearNumber1, YearNumberWithCharacter0, YearNumberWithCharacter1
Instance Method Summary collapse
- #_nt_author_name ⇒ Object
- #_nt_author_prefix_word ⇒ Object
- #_nt_author_separator ⇒ Object
- #_nt_author_word ⇒ Object
- #_nt_authors_names ⇒ Object
- #_nt_authorship ⇒ Object
- #_nt_basionym_authorship_with_parenthesis ⇒ Object
- #_nt_cap_digraph ⇒ Object
- #_nt_cap_latin_word ⇒ Object
- #_nt_digraph ⇒ Object
- #_nt_ex_authorship ⇒ Object
- #_nt_ex_sep ⇒ Object
- #_nt_full_name_letters ⇒ Object
- #_nt_genus ⇒ Object
- #_nt_hybrid_character ⇒ Object
- #_nt_infraspecies ⇒ Object
- #_nt_infraspecies_epitheton ⇒ Object
- #_nt_infraspecies_mult ⇒ Object
- #_nt_latin_word ⇒ Object
- #_nt_left_paren ⇒ Object
- #_nt_multinomial_name ⇒ Object
- #_nt_multiplication_sign ⇒ Object
- #_nt_rank ⇒ Object
- #_nt_rank_forma ⇒ Object
- #_nt_right_paren ⇒ Object
- #_nt_root ⇒ Object
- #_nt_scientific_name_1 ⇒ Object
- #_nt_scientific_name_2 ⇒ Object
- #_nt_scientific_name_3 ⇒ Object
- #_nt_scientific_name_4 ⇒ Object
- #_nt_scientific_name_5 ⇒ Object
- #_nt_simple_authorship ⇒ Object
- #_nt_space ⇒ Object
- #_nt_space_hard ⇒ Object
- #_nt_species ⇒ Object
- #_nt_species_epitheton ⇒ Object
- #_nt_species_prefix ⇒ Object
- #_nt_species_word ⇒ Object
- #_nt_species_word_hybrid ⇒ Object
- #_nt_status_part ⇒ Object
- #_nt_status_word ⇒ Object
- #_nt_subgenus ⇒ Object
- #_nt_taxon_concept_rank ⇒ Object
- #_nt_uninomial_epitheton ⇒ Object
- #_nt_uninomial_name ⇒ Object
- #_nt_unknown_auth ⇒ Object
- #_nt_valid_name_letters ⇒ Object
- #_nt_year ⇒ Object
- #_nt_year_number ⇒ Object
- #_nt_year_number_with_character ⇒ Object
- #root ⇒ Object
Instance Method Details
#_nt_author_name ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3790 def start_index = index if node_cache[:author_name].has_key?(index) cached = node_cache[:author_name][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_space s1 << r2 if r2 r3 = s1 << r3 if r3 r4 = _nt_space s1 << r4 if r4 r5 = s1 << r5 if r5 r6 = _nt_space s1 << r6 end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(AuthorName0) r1.extend(AuthorName1) else @index = i1 r1 = nil end if r1 r0 = r1 else i7, s7 = index, [] r8 = _nt_space s7 << r8 if r8 r9 = s7 << r9 if r9 r10 = _nt_space s7 << r10 if r10 r11 = s7 << r11 if r11 r12 = _nt_space s7 << r12 end end end end if s7.last r7 = instantiate_node(SyntaxNode,input, i7...index, s7) r7.extend(AuthorName2) r7.extend(AuthorName3) else @index = i7 r7 = nil end if r7 r0 = r7 else r13 = if r13 r0 = r13 else @index = i0 r0 = nil end end end node_cache[:author_name][start_index] = r0 r0 end |
#_nt_author_prefix_word ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 4263 def start_index = index if node_cache[:author_prefix_word].has_key?(index) cached = node_cache[:author_prefix_word][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] r1 = _nt_space s0 << r1 if r1 i2 = index if has_terminal?("ab", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("ab") r3 = nil end if r3 r2 = r3 else if has_terminal?("bis", false, index) r4 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("bis") r4 = nil end if r4 r2 = r4 else if has_terminal?("da", false, index) r5 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("da") r5 = nil end if r5 r2 = r5 else if has_terminal?("der", false, index) r6 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("der") r6 = nil end if r6 r2 = r6 else if has_terminal?("den", false, index) r7 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("den") r7 = nil end if r7 r2 = r7 else if has_terminal?("della", false, index) r8 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("della") r8 = nil end if r8 r2 = r8 else if has_terminal?("dela", false, index) r9 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("dela") r9 = nil end if r9 r2 = r9 else if has_terminal?("de", false, index) r10 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("de") r10 = nil end if r10 r2 = r10 else if has_terminal?("di", false, index) r11 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("di") r11 = nil end if r11 r2 = r11 else if has_terminal?("du", false, index) r12 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("du") r12 = nil end if r12 r2 = r12 else if has_terminal?("la", false, index) r13 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("la") r13 = nil end if r13 r2 = r13 else if has_terminal?("ter", false, index) r14 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("ter") r14 = nil end if r14 r2 = r14 else if has_terminal?("van", false, index) r15 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("van") r15 = nil end if r15 r2 = r15 else if has_terminal?("von", false, index) r16 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("von") r16 = nil end if r16 r2 = r16 else @index = i2 r2 = nil end end end end end end end end end end end end end end s0 << r2 if r2 i17 = index r18 = _nt_space_hard if r18 @index = i17 r17 = instantiate_node(SyntaxNode,input, index...index) else r17 = nil end s0 << r17 end end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(AuthorPrefixWord0) r0.extend(AuthorPrefixWord1) else @index = i0 r0 = nil end node_cache[:author_prefix_word][start_index] = r0 r0 end |
#_nt_author_separator ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3653 def start_index = index if node_cache[:author_separator].has_key?(index) cached = node_cache[:author_separator][index] @index = cached.interval.end if cached return cached end i0 = index if has_terminal?("&", false, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("&") r1 = nil end if r1 r0 = r1 r0.extend(AuthorSeparator0) else if has_terminal?(",", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure(",") r2 = nil end if r2 r0 = r2 r0.extend(AuthorSeparator0) else if has_terminal?("and", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("and") r3 = nil end if r3 r0 = r3 r0.extend(AuthorSeparator0) else if has_terminal?("et", false, index) r4 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("et") r4 = nil end if r4 r0 = r4 r0.extend(AuthorSeparator0) else @index = i0 r0 = nil end end end end node_cache[:author_separator][start_index] = r0 r0 end |
#_nt_author_word ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3937 def start_index = index if node_cache[:author_word].has_key?(index) cached = node_cache[:author_word][index] @index = cached.interval.end if cached return cached end i0 = index if has_terminal?("A S. Xu", false, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 7)) r1.extend(AuthorWord0) @index += 7 else terminal_parse_failure("A S. Xu") r1 = nil end if r1 r0 = r1 else i2 = index if has_terminal?("arg.", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("arg.") r3 = nil end if r3 r2 = r3 r2.extend(AuthorWord1) else if has_terminal?("et al.\{\?\}", false, index) r4 = instantiate_node(SyntaxNode,input, index...(index + 9)) @index += 9 else terminal_parse_failure("et al.\{\?\}") r4 = nil end if r4 r2 = r4 r2.extend(AuthorWord1) else if has_terminal?("et al.", false, index) r5 = instantiate_node(SyntaxNode,input, index...(index + 6)) @index += 6 else terminal_parse_failure("et al.") r5 = nil end if r5 r2 = r5 r2.extend(AuthorWord1) else @index = i2 r2 = nil end end end if r2 r0 = r2 else i6, s6 = index, [] i7 = index if has_terminal?("Å", false, index) r8 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Å") r8 = nil end if r8 r7 = r8 else if has_terminal?("Ö", false, index) r9 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ö") r9 = nil end if r9 r7 = r9 else if has_terminal?("Á", false, index) r10 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Á") r10 = nil end if r10 r7 = r10 else if has_terminal?("Ø", false, index) r11 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ø") r11 = nil end if r11 r7 = r11 else if has_terminal?("Ô", false, index) r12 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ô") r12 = nil end if r12 r7 = r12 else if has_terminal?("Š", false, index) r13 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Š") r13 = nil end if r13 r7 = r13 else if has_terminal?("Ś", false, index) r14 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ś") r14 = nil end if r14 r7 = r14 else if has_terminal?("Č", false, index) r15 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Č") r15 = nil end if r15 r7 = r15 else if has_terminal?("Ķ", false, index) r16 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ķ") r16 = nil end if r16 r7 = r16 else if has_terminal?("Ł", false, index) r17 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ł") r17 = nil end if r17 r7 = r17 else if has_terminal?("É", false, index) r18 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("É") r18 = nil end if r18 r7 = r18 else if has_terminal?("Ž", false, index) r19 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ž") r19 = nil end if r19 r7 = r19 else if has_terminal?('\G[A-W]', true, index) r20 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r20 = nil end if r20 r7 = r20 else if has_terminal?('\G[Y-Z]', true, index) r21 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r21 = nil end if r21 r7 = r21 else @index = i7 r7 = nil end end end end end end end end end end end end end end s6 << r7 if r7 s22, i22 = [], index loop do if has_terminal?('\G[^0-9\\[\\]\\(\\)\\s&,]', true, index) r23 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r23 = nil end if r23 s22 << r23 else break end end r22 = instantiate_node(SyntaxNode,input, i22...index, s22) s6 << r22 end if s6.last r6 = instantiate_node(SyntaxNode,input, i6...index, s6) r6.extend(AuthorWord2) r6.extend(AuthorWord3) else @index = i6 r6 = nil end if r6 r0 = r6 else i24, s24 = index, [] if has_terminal?("X", false, index) r25 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("X") r25 = nil end s24 << r25 if r25 s26, i26 = [], index loop do if has_terminal?('\G[^0-9\\[\\]\\(\\)\\s&,]', true, index) r27 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r27 = nil end if r27 s26 << r27 else break end end if s26.empty? @index = i26 r26 = nil else r26 = instantiate_node(SyntaxNode,input, i26...index, s26) end s24 << r26 end if s24.last r24 = instantiate_node(SyntaxNode,input, i24...index, s24) r24.extend(AuthorWord4) r24.extend(AuthorWord5) else @index = i24 r24 = nil end if r24 r0 = r24 else r28 = if r28 r0 = r28 else @index = i0 r0 = nil end end end end end node_cache[:author_word][start_index] = r0 r0 end |
#_nt_authors_names ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3433 def start_index = index if node_cache[:authors_names].has_key?(index) cached = node_cache[:authors_names][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = s1 << r4 if r4 r5 = _nt_space s1 << r5 if r5 r6 = s1 << r6 end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(AuthorsNames0) r1.extend(AuthorsNames1) else @index = i1 r1 = nil end if r1 r0 = r1 else r7 = if r7 r0 = r7 else r8 = _nt_unknown_auth if r8 r0 = r8 else @index = i0 r0 = nil end end end node_cache[:authors_names][start_index] = r0 r0 end |
#_nt_authorship ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 2542 def start_index = index if node_cache[:authorship].has_key?(index) cached = node_cache[:authorship][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = s1 << r4 if r4 if has_terminal?(",", false, index) r6 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure(",") r6 = nil end if r6 r5 = r6 else r5 = instantiate_node(SyntaxNode,input, index...index) end s1 << r5 if r5 r7 = _nt_space s1 << r7 if r7 r8 = s1 << r8 end end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(Authorship0) r1.extend(Authorship1) else @index = i1 r1 = nil end if r1 r0 = r1 else i9, s9 = index, [] r10 = s9 << r10 if r10 r11 = _nt_space s9 << r11 if r11 r12 = s9 << r12 end end if s9.last r9 = instantiate_node(SyntaxNode,input, i9...index, s9) r9.extend(Authorship2) r9.extend(Authorship3) else @index = i9 r9 = nil end if r9 r0 = r9 else r13 = if r13 r0 = r13 else i14, s14 = index, [] r15 = s14 << r15 if r15 if has_terminal?(",", false, index) r17 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure(",") r17 = nil end if r17 r16 = r17 else r16 = instantiate_node(SyntaxNode,input, index...index) end s14 << r16 if r16 r18 = _nt_space s14 << r18 if r18 r19 = s14 << r19 end end end if s14.last r14 = instantiate_node(SyntaxNode,input, i14...index, s14) r14.extend(Authorship4) r14.extend(Authorship5) else @index = i14 r14 = nil end if r14 r0 = r14 else r20 = if r20 r0 = r20 else @index = i0 r0 = nil end end end end end node_cache[:authorship][start_index] = r0 r0 end |
#_nt_basionym_authorship_with_parenthesis ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 2847 def start_index = index if node_cache[:basionym_authorship_with_parenthesis].has_key?(index) cached = node_cache[:basionym_authorship_with_parenthesis][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_left_paren s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = s1 << r4 if r4 r5 = _nt_space s1 << r5 if r5 r6 = _nt_right_paren s1 << r6 if r6 r7 = _nt_space s1 << r7 if r7 if has_terminal?('\G[,]', true, index) r9 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r9 = nil end if r9 r8 = r9 else r8 = instantiate_node(SyntaxNode,input, index...index) end s1 << r8 if r8 r10 = _nt_space s1 << r10 if r10 r11 = _nt_year s1 << r11 end end end end end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(BasionymAuthorshipWithParenthesis0) r1.extend(BasionymAuthorshipWithParenthesis1) else @index = i1 r1 = nil end if r1 r0 = r1 else i12, s12 = index, [] r13 = _nt_left_paren s12 << r13 if r13 r14 = _nt_space s12 << r14 if r14 r15 = s12 << r15 if r15 if has_terminal?(",", false, index) r17 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure(",") r17 = nil end if r17 r16 = r17 else r16 = instantiate_node(SyntaxNode,input, index...index) end s12 << r16 if r16 r18 = _nt_space s12 << r18 if r18 r19 = s12 << r19 if r19 r20 = _nt_space s12 << r20 if r20 r21 = _nt_right_paren s12 << r21 end end end end end end end if s12.last r12 = instantiate_node(SyntaxNode,input, i12...index, s12) r12.extend(BasionymAuthorshipWithParenthesis2) r12.extend(BasionymAuthorshipWithParenthesis3) else @index = i12 r12 = nil end if r12 r0 = r12 else i22, s22 = index, [] r23 = _nt_left_paren s22 << r23 if r23 r24 = _nt_space s22 << r24 if r24 r25 = s22 << r25 if r25 r26 = _nt_space s22 << r26 if r26 r27 = _nt_right_paren s22 << r27 end end end end if s22.last r22 = instantiate_node(SyntaxNode,input, i22...index, s22) r22.extend(BasionymAuthorshipWithParenthesis4) r22.extend(BasionymAuthorshipWithParenthesis5) else @index = i22 r22 = nil end if r22 r0 = r22 else i28, s28 = index, [] r29 = _nt_left_paren s28 << r29 if r29 r30 = _nt_space s28 << r30 if r30 if has_terminal?("?", false, index) r31 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("?") r31 = nil end s28 << r31 if r31 r32 = _nt_space s28 << r32 if r32 r33 = _nt_right_paren s28 << r33 end end end end if s28.last r28 = instantiate_node(SyntaxNode,input, i28...index, s28) r28.extend(BasionymAuthorshipWithParenthesis6) r28.extend(BasionymAuthorshipWithParenthesis7) else @index = i28 r28 = nil end if r28 r0 = r28 else @index = i0 r0 = nil end end end end node_cache[:basionym_authorship_with_parenthesis][start_index] = r0 r0 end |
#_nt_cap_digraph ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5447 def _nt_cap_digraph start_index = index if node_cache[:cap_digraph].has_key?(index) cached = node_cache[:cap_digraph][index] @index = cached.interval.end if cached return cached end i0 = index if has_terminal?("Æ", false, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 2)) r1.extend(CapDigraph0) @index += 2 else terminal_parse_failure("Æ") r1 = nil end if r1 r0 = r1 else if has_terminal?("Œ", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 2)) r2.extend(CapDigraph1) @index += 2 else terminal_parse_failure("Œ") r2 = nil end if r2 r0 = r2 else @index = i0 r0 = nil end end node_cache[:cap_digraph][start_index] = r0 r0 end |
#_nt_cap_latin_word ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 4498 def _nt_cap_latin_word start_index = index if node_cache[:cap_latin_word].has_key?(index) cached = node_cache[:cap_latin_word][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] i2 = index if has_terminal?('\G[A-Z]', true, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r3 = nil end if r3 r2 = r3 else r4 = _nt_cap_digraph if r4 r2 = r4 else @index = i2 r2 = nil end end s1 << r2 if r2 r5 = _nt_latin_word s1 << r5 if r5 if has_terminal?("?", false, index) r6 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("?") r6 = nil end s1 << r6 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(CapLatinWord0) r1.extend(CapLatinWord1) else @index = i1 r1 = nil end if r1 r0 = r1 else i7, s7 = index, [] i8 = index if has_terminal?('\G[A-Z]', true, index) r9 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r9 = nil end if r9 r8 = r9 else r10 = _nt_cap_digraph if r10 r8 = r10 else @index = i8 r8 = nil end end s7 << r8 if r8 r11 = _nt_latin_word s7 << r11 end if s7.last r7 = instantiate_node(SyntaxNode,input, i7...index, s7) r7.extend(CapLatinWord2) r7.extend(CapLatinWord3) else @index = i7 r7 = nil end if r7 r0 = r7 else i12 = index if has_terminal?("Ca", false, index) r13 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ca") r13 = nil end if r13 r12 = r13 r12.extend(CapLatinWord4) else if has_terminal?("Ea", false, index) r14 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ea") r14 = nil end if r14 r12 = r14 r12.extend(CapLatinWord4) else if has_terminal?("Ge", false, index) r15 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ge") r15 = nil end if r15 r12 = r15 r12.extend(CapLatinWord4) else if has_terminal?("Ia", false, index) r16 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ia") r16 = nil end if r16 r12 = r16 r12.extend(CapLatinWord4) else if has_terminal?("Io", false, index) r17 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Io") r17 = nil end if r17 r12 = r17 r12.extend(CapLatinWord4) else if has_terminal?("Io", false, index) r18 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Io") r18 = nil end if r18 r12 = r18 r12.extend(CapLatinWord4) else if has_terminal?("Ix", false, index) r19 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ix") r19 = nil end if r19 r12 = r19 r12.extend(CapLatinWord4) else if has_terminal?("Lo", false, index) r20 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Lo") r20 = nil end if r20 r12 = r20 r12.extend(CapLatinWord4) else if has_terminal?("Oa", false, index) r21 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Oa") r21 = nil end if r21 r12 = r21 r12.extend(CapLatinWord4) else if has_terminal?("Ra", false, index) r22 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ra") r22 = nil end if r22 r12 = r22 r12.extend(CapLatinWord4) else if has_terminal?("Ty", false, index) r23 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ty") r23 = nil end if r23 r12 = r23 r12.extend(CapLatinWord4) else if has_terminal?("Ua", false, index) r24 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ua") r24 = nil end if r24 r12 = r24 r12.extend(CapLatinWord4) else if has_terminal?("Aa", false, index) r25 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Aa") r25 = nil end if r25 r12 = r25 r12.extend(CapLatinWord4) else if has_terminal?("Ja", false, index) r26 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ja") r26 = nil end if r26 r12 = r26 r12.extend(CapLatinWord4) else if has_terminal?("Zu", false, index) r27 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Zu") r27 = nil end if r27 r12 = r27 r12.extend(CapLatinWord4) else if has_terminal?("La", false, index) r28 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("La") r28 = nil end if r28 r12 = r28 r12.extend(CapLatinWord4) else if has_terminal?("Qu", false, index) r29 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Qu") r29 = nil end if r29 r12 = r29 r12.extend(CapLatinWord4) else if has_terminal?("As", false, index) r30 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("As") r30 = nil end if r30 r12 = r30 r12.extend(CapLatinWord4) else if has_terminal?("Ba", false, index) r31 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("Ba") r31 = nil end if r31 r12 = r31 r12.extend(CapLatinWord4) else @index = i12 r12 = nil end end end end end end end end end end end end end end end end end end end if r12 r0 = r12 else @index = i0 r0 = nil end end end node_cache[:cap_latin_word][start_index] = r0 r0 end |
#_nt_digraph ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5500 def _nt_digraph start_index = index if node_cache[:digraph].has_key?(index) cached = node_cache[:digraph][index] @index = cached.interval.end if cached return cached end i0 = index if has_terminal?("æ", false, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 2)) r1.extend(Digraph0) @index += 2 else terminal_parse_failure("æ") r1 = nil end if r1 r0 = r1 else if has_terminal?("œ", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 2)) r2.extend(Digraph1) @index += 2 else terminal_parse_failure("œ") r2 = nil end if r2 r0 = r2 else @index = i0 r0 = nil end end node_cache[:digraph][start_index] = r0 r0 end |
#_nt_ex_authorship ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3072 def start_index = index if node_cache[:ex_authorship].has_key?(index) cached = node_cache[:ex_authorship][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] r1 = _nt_ex_sep s0 << r1 if r1 r2 = _nt_space s0 << r2 if r2 r3 = s0 << r3 end end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(ExAuthorship0) r0.extend(ExAuthorship1) else @index = i0 r0 = nil end node_cache[:ex_authorship][start_index] = r0 r0 end |
#_nt_ex_sep ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3573 def _nt_ex_sep start_index = index if node_cache[:ex_sep].has_key?(index) cached = node_cache[:ex_sep][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] i1 = index if has_terminal?("ex", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("ex") r2 = nil end if r2 r1 = r2 else if has_terminal?("in", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("in") r3 = nil end if r3 r1 = r3 else @index = i1 r1 = nil end end s0 << r1 if r1 i4 = index if has_terminal?('\G[\\s]', true, index) r5 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r5 = nil end if r5 @index = i4 r4 = instantiate_node(SyntaxNode,input, index...index) else r4 = nil end s0 << r4 end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(ExSep0) else @index = i0 r0 = nil end node_cache[:ex_sep][start_index] = r0 r0 end |
#_nt_full_name_letters ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5330 def _nt_full_name_letters start_index = index if node_cache[:full_name_letters].has_key?(index) cached = node_cache[:full_name_letters][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_digraph s1 << r2 if r2 r3 = _nt_full_name_letters s1 << r3 end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(FullNameLetters0) r1.extend(FullNameLetters1) else @index = i1 r1 = nil end if r1 r0 = r1 else i4, s4 = index, [] r5 = _nt_valid_name_letters s4 << r5 if r5 r6 = _nt_digraph s4 << r6 if r6 r7 = _nt_full_name_letters s4 << r7 end end if s4.last r4 = instantiate_node(SyntaxNode,input, i4...index, s4) r4.extend(FullNameLetters2) r4.extend(FullNameLetters3) else @index = i4 r4 = nil end if r4 r0 = r4 else r8 = _nt_valid_name_letters if r8 r0 = r8 else @index = i0 r0 = nil end end end node_cache[:full_name_letters][start_index] = r0 r0 end |
#_nt_genus ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 2273 def _nt_genus start_index = index if node_cache[:genus].has_key?(index) cached = node_cache[:genus][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] r1 = _nt_cap_latin_word s0 << r1 if r1 i2 = index i3, s3 = index, [] r4 = _nt_space_hard s3 << r4 if r4 r5 = s3 << r5 if r5 r6 = _nt_space_hard s3 << r6 if r6 r7 = s3 << r7 end end end if s3.last r3 = instantiate_node(SyntaxNode,input, i3...index, s3) r3.extend(Genus0) else @index = i3 r3 = nil end if r3 r2 = nil else @index = i2 r2 = instantiate_node(SyntaxNode,input, index...index) end s0 << r2 end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(Genus1) r0.extend(Genus2) else @index = i0 r0 = nil end node_cache[:genus][start_index] = r0 r0 end |
#_nt_hybrid_character ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5843 def _nt_hybrid_character start_index = index if node_cache[:hybrid_character].has_key?(index) cached = node_cache[:hybrid_character][index] @index = cached.interval.end if cached return cached end i0 = index i1 = index if has_terminal?("x", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("x") r2 = nil end if r2 r1 = r2 r1.extend(HybridCharacter0) else if has_terminal?("X", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("X") r3 = nil end if r3 r1 = r3 r1.extend(HybridCharacter0) else @index = i1 r1 = nil end end if r1 r0 = r1 else r4 = _nt_multiplication_sign if r4 r0 = r4 else @index = i0 r0 = nil end end node_cache[:hybrid_character][start_index] = r0 r0 end |
#_nt_infraspecies ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 1164 def _nt_infraspecies start_index = index if node_cache[:infraspecies].has_key?(index) cached = node_cache[:infraspecies][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_infraspecies_epitheton s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(Infraspecies0) r1.extend(Infraspecies1) else @index = i1 r1 = nil end if r1 r0 = r1 else r5 = _nt_infraspecies_epitheton if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:infraspecies][start_index] = r0 r0 end |
#_nt_infraspecies_epitheton ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 1265 def _nt_infraspecies_epitheton start_index = index if node_cache[:infraspecies_epitheton].has_key?(index) cached = node_cache[:infraspecies_epitheton][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_rank s1 << r2 if r2 r3 = _nt_space_hard s1 << r3 if r3 r4 = _nt_species_word s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(InfraspeciesEpitheton0) r1.extend(InfraspeciesEpitheton1) else @index = i1 r1 = nil end if r1 r0 = r1 else i5, s5 = index, [] r6 = _nt_species_word s5 << r6 if r6 i7 = index if has_terminal?('\G[\\.]', true, index) r8 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r8 = nil end if r8 r7 = nil else @index = i7 r7 = instantiate_node(SyntaxNode,input, index...index) end s5 << r7 end if s5.last r5 = instantiate_node(SyntaxNode,input, i5...index, s5) r5.extend(InfraspeciesEpitheton2) r5.extend(InfraspeciesEpitheton3) else @index = i5 r5 = nil end if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:infraspecies_epitheton][start_index] = r0 r0 end |
#_nt_infraspecies_mult ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 1086 def _nt_infraspecies_mult start_index = index if node_cache[:infraspecies_mult].has_key?(index) cached = node_cache[:infraspecies_mult][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_infraspecies s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_infraspecies_mult s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(InfraspeciesMult0) r1.extend(InfraspeciesMult1) else @index = i1 r1 = nil end if r1 r0 = r1 else r5 = _nt_infraspecies r5.extend(InfraspeciesMult2) if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:infraspecies_mult][start_index] = r0 r0 end |
#_nt_latin_word ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5234 def _nt_latin_word start_index = index if node_cache[:latin_word].has_key?(index) cached = node_cache[:latin_word][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] if has_terminal?('\G[a-zëüäöïéåóç]', true, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r2 = nil end s1 << r2 if r2 r3 = _nt_full_name_letters s1 << r3 end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(LatinWord0) r1.extend(LatinWord1) else @index = i1 r1 = nil end if r1 r0 = r1 else i4, s4 = index, [] r5 = _nt_digraph s4 << r5 if r5 r6 = _nt_full_name_letters s4 << r6 end if s4.last r4 = instantiate_node(SyntaxNode,input, i4...index, s4) r4.extend(LatinWord2) r4.extend(LatinWord3) else @index = i4 r4 = nil end if r4 r0 = r4 else @index = i0 r0 = nil end end node_cache[:latin_word][start_index] = r0 r0 end |
#_nt_left_paren ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5795 def _nt_left_paren start_index = index if node_cache[:left_paren].has_key?(index) cached = node_cache[:left_paren][index] @index = cached.interval.end if cached return cached end if has_terminal?("(", false, index) r0 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("(") r0 = nil end node_cache[:left_paren][start_index] = r0 r0 end |
#_nt_multinomial_name ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 853 def _nt_multinomial_name start_index = index if node_cache[:multinomial_name].has_key?(index) cached = node_cache[:multinomial_name][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_genus s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_subgenus s1 << r4 if r4 r5 = _nt_space s1 << r5 if r5 r7 = _nt_species_prefix if r7 r6 = r7 else r6 = instantiate_node(SyntaxNode,input, index...index) end s1 << r6 if r6 r8 = _nt_space s1 << r8 if r8 r9 = _nt_species s1 << r9 if r9 r10 = _nt_space_hard s1 << r10 if r10 r11 = _nt_infraspecies_mult s1 << r11 end end end end end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(MultinomialName0) r1.extend(MultinomialName1) else @index = i1 r1 = nil end if r1 r0 = r1 else i12, s12 = index, [] r13 = _nt_genus s12 << r13 if r13 r14 = _nt_space s12 << r14 if r14 r15 = _nt_subgenus s12 << r15 if r15 r16 = _nt_space s12 << r16 if r16 r18 = _nt_species_prefix if r18 r17 = r18 else r17 = instantiate_node(SyntaxNode,input, index...index) end s12 << r17 if r17 r19 = _nt_space s12 << r19 if r19 r20 = _nt_species s12 << r20 end end end end end end if s12.last r12 = instantiate_node(SyntaxNode,input, i12...index, s12) r12.extend(MultinomialName2) r12.extend(MultinomialName3) else @index = i12 r12 = nil end if r12 r0 = r12 else i21, s21 = index, [] r22 = _nt_genus s21 << r22 if r22 r23 = _nt_space s21 << r23 if r23 r25 = _nt_species_prefix if r25 r24 = r25 else r24 = instantiate_node(SyntaxNode,input, index...index) end s21 << r24 if r24 r26 = _nt_space s21 << r26 if r26 r27 = _nt_species s21 << r27 if r27 r28 = _nt_space_hard s21 << r28 if r28 r29 = _nt_infraspecies_mult s21 << r29 end end end end end end if s21.last r21 = instantiate_node(SyntaxNode,input, i21...index, s21) r21.extend(MultinomialName4) r21.extend(MultinomialName5) else @index = i21 r21 = nil end if r21 r0 = r21 else i30, s30 = index, [] r31 = _nt_genus s30 << r31 if r31 r32 = _nt_space s30 << r32 if r32 r34 = _nt_species_prefix if r34 r33 = r34 else r33 = instantiate_node(SyntaxNode,input, index...index) end s30 << r33 if r33 r35 = _nt_space s30 << r35 if r35 r36 = _nt_species s30 << r36 end end end end if s30.last r30 = instantiate_node(SyntaxNode,input, i30...index, s30) r30.extend(MultinomialName6) r30.extend(MultinomialName7) else @index = i30 r30 = nil end if r30 r0 = r30 else @index = i0 r0 = nil end end end end node_cache[:multinomial_name][start_index] = r0 r0 end |
#_nt_multiplication_sign ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5902 def _nt_multiplication_sign start_index = index if node_cache[:multiplication_sign].has_key?(index) cached = node_cache[:multiplication_sign][index] @index = cached.interval.end if cached return cached end if has_terminal?("×", false, index) r0 = instantiate_node(SyntaxNode,input, index...(index + 2)) r0.extend(MultiplicationSign0) @index += 2 else terminal_parse_failure("×") r0 = nil end node_cache[:multiplication_sign][start_index] = r0 r0 end |
#_nt_rank ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 1407 def _nt_rank start_index = index if node_cache[:rank].has_key?(index) cached = node_cache[:rank][index] @index = cached.interval.end if cached return cached end i0 = index i1 = index if has_terminal?("morph.", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 6)) @index += 6 else terminal_parse_failure("morph.") r2 = nil end if r2 r1 = r2 r1.extend(Rank0) else if has_terminal?("f.sp.", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("f.sp.") r3 = nil end if r3 r1 = r3 r1.extend(Rank0) else if has_terminal?("B", false, index) r4 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("B") r4 = nil end if r4 r1 = r4 r1.extend(Rank0) else if has_terminal?("ssp.", false, index) r5 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("ssp.") r5 = nil end if r5 r1 = r5 r1.extend(Rank0) else if has_terminal?("mut.", false, index) r6 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("mut.") r6 = nil end if r6 r1 = r6 r1.extend(Rank0) else if has_terminal?("nat", false, index) r7 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("nat") r7 = nil end if r7 r1 = r7 r1.extend(Rank0) else if has_terminal?("nothosubsp.", false, index) r8 = instantiate_node(SyntaxNode,input, index...(index + 11)) @index += 11 else terminal_parse_failure("nothosubsp.") r8 = nil end if r8 r1 = r8 r1.extend(Rank0) else if has_terminal?("pseudovar.", false, index) r9 = instantiate_node(SyntaxNode,input, index...(index + 10)) @index += 10 else terminal_parse_failure("pseudovar.") r9 = nil end if r9 r1 = r9 r1.extend(Rank0) else if has_terminal?("sect.", false, index) r10 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("sect.") r10 = nil end if r10 r1 = r10 r1.extend(Rank0) else if has_terminal?("ser.", false, index) r11 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("ser.") r11 = nil end if r11 r1 = r11 r1.extend(Rank0) else if has_terminal?("var.", false, index) r12 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("var.") r12 = nil end if r12 r1 = r12 r1.extend(Rank0) else if has_terminal?("subvar.", false, index) r13 = instantiate_node(SyntaxNode,input, index...(index + 7)) @index += 7 else terminal_parse_failure("subvar.") r13 = nil end if r13 r1 = r13 r1.extend(Rank0) else if has_terminal?("[var.]", false, index) r14 = instantiate_node(SyntaxNode,input, index...(index + 6)) @index += 6 else terminal_parse_failure("[var.]") r14 = nil end if r14 r1 = r14 r1.extend(Rank0) else if has_terminal?("subsp.", false, index) r15 = instantiate_node(SyntaxNode,input, index...(index + 6)) @index += 6 else terminal_parse_failure("subsp.") r15 = nil end if r15 r1 = r15 r1.extend(Rank0) else if has_terminal?("subf.", false, index) r16 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("subf.") r16 = nil end if r16 r1 = r16 r1.extend(Rank0) else if has_terminal?("race", false, index) r17 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("race") r17 = nil end if r17 r1 = r17 r1.extend(Rank0) else if has_terminal?("α", false, index) r18 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("α") r18 = nil end if r18 r1 = r18 r1.extend(Rank0) else if has_terminal?("ββ", false, index) r19 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("ββ") r19 = nil end if r19 r1 = r19 r1.extend(Rank0) else if has_terminal?("β", false, index) r20 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("β") r20 = nil end if r20 r1 = r20 r1.extend(Rank0) else if has_terminal?("γ", false, index) r21 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("γ") r21 = nil end if r21 r1 = r21 r1.extend(Rank0) else if has_terminal?("δ", false, index) r22 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("δ") r22 = nil end if r22 r1 = r22 r1.extend(Rank0) else if has_terminal?("ε", false, index) r23 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("ε") r23 = nil end if r23 r1 = r23 r1.extend(Rank0) else if has_terminal?("φ", false, index) r24 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("φ") r24 = nil end if r24 r1 = r24 r1.extend(Rank0) else if has_terminal?("θ", false, index) r25 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("θ") r25 = nil end if r25 r1 = r25 r1.extend(Rank0) else if has_terminal?("μ", false, index) r26 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("μ") r26 = nil end if r26 r1 = r26 r1.extend(Rank0) else if has_terminal?("a.", false, index) r27 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("a.") r27 = nil end if r27 r1 = r27 r1.extend(Rank0) else if has_terminal?("b.", false, index) r28 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("b.") r28 = nil end if r28 r1 = r28 r1.extend(Rank0) else if has_terminal?("c.", false, index) r29 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("c.") r29 = nil end if r29 r1 = r29 r1.extend(Rank0) else if has_terminal?("d.", false, index) r30 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("d.") r30 = nil end if r30 r1 = r30 r1.extend(Rank0) else if has_terminal?("e.", false, index) r31 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("e.") r31 = nil end if r31 r1 = r31 r1.extend(Rank0) else if has_terminal?("g.", false, index) r32 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("g.") r32 = nil end if r32 r1 = r32 r1.extend(Rank0) else if has_terminal?("k.", false, index) r33 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("k.") r33 = nil end if r33 r1 = r33 r1.extend(Rank0) else if has_terminal?("****", false, index) r34 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("****") r34 = nil end if r34 r1 = r34 r1.extend(Rank0) else if has_terminal?("**", false, index) r35 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("**") r35 = nil end if r35 r1 = r35 r1.extend(Rank0) else if has_terminal?("*", false, index) r36 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("*") r36 = nil end if r36 r1 = r36 r1.extend(Rank0) else @index = i1 r1 = nil end end end end end end end end end end end end end end end end end end end end end end end end end end end end end end end end end end end if r1 r0 = r1 else r37 = _nt_rank_forma if r37 r0 = r37 else @index = i0 r0 = nil end end node_cache[:rank][start_index] = r0 r0 end |
#_nt_rank_forma ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 1871 def _nt_rank_forma start_index = index if node_cache[:rank_forma].has_key?(index) cached = node_cache[:rank_forma][index] @index = cached.interval.end if cached return cached end i0 = index if has_terminal?("forma", false, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("forma") r1 = nil end if r1 r0 = r1 r0.extend(RankForma0) else if has_terminal?("form.", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("form.") r2 = nil end if r2 r0 = r2 r0.extend(RankForma0) else if has_terminal?("fo.", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("fo.") r3 = nil end if r3 r0 = r3 r0.extend(RankForma0) else if has_terminal?("f.", false, index) r4 = instantiate_node(SyntaxNode,input, index...(index + 2)) @index += 2 else terminal_parse_failure("f.") r4 = nil end if r4 r0 = r4 r0.extend(RankForma0) else @index = i0 r0 = nil end end end end node_cache[:rank_forma][start_index] = r0 r0 end |
#_nt_right_paren ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5816 def _nt_right_paren start_index = index if node_cache[:right_paren].has_key?(index) cached = node_cache[:right_paren][index] @index = cached.interval.end if cached return cached end if has_terminal?(")", false, index) r0 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure(")") r0 = nil end node_cache[:right_paren][start_index] = r0 r0 end |
#_nt_root ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 45 def _nt_root start_index = index if node_cache[:root].has_key?(index) cached = node_cache[:root][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] r1 = _nt_space s0 << r1 if r1 r2 = _nt_scientific_name_5 s0 << r2 if r2 r3 = _nt_space s0 << r3 end end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(Root0) r0.extend(Root1) else @index = i0 r0 = nil end node_cache[:root][start_index] = r0 r0 end |
#_nt_scientific_name_1 ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 516 def _nt_scientific_name_1 start_index = index if node_cache[:scientific_name_1].has_key?(index) cached = node_cache[:scientific_name_1][index] @index = cached.interval.end if cached return cached end i0 = index r1 = _nt_multinomial_name if r1 r0 = r1 else r2 = _nt_uninomial_name if r2 r0 = r2 else @index = i0 r0 = nil end end node_cache[:scientific_name_1][start_index] = r0 r0 end |
#_nt_scientific_name_2 ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 471 def _nt_scientific_name_2 start_index = index if node_cache[:scientific_name_2].has_key?(index) cached = node_cache[:scientific_name_2][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_scientific_name_1 s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_status_part s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(ScientificName20) r1.extend(ScientificName21) else @index = i1 r1 = nil end if r1 r0 = r1 else r5 = _nt_scientific_name_1 if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:scientific_name_2][start_index] = r0 r0 end |
#_nt_scientific_name_3 ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 390 def _nt_scientific_name_3 start_index = index if node_cache[:scientific_name_3].has_key?(index) cached = node_cache[:scientific_name_3][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_hybrid_character s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_scientific_name_2 s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(ScientificName30) r1.extend(ScientificName31) else @index = i1 r1 = nil end if r1 r0 = r1 else r5 = _nt_scientific_name_2 if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:scientific_name_3][start_index] = r0 r0 end |
#_nt_scientific_name_4 ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 260 def _nt_scientific_name_4 start_index = index if node_cache[:scientific_name_4].has_key?(index) cached = node_cache[:scientific_name_4][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_scientific_name_1 s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_hybrid_character s1 << r4 if r4 r5 = _nt_space s1 << r5 if r5 r6 = _nt_scientific_name_1 s1 << r6 end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(ScientificName40) r1.extend(ScientificName41) else @index = i1 r1 = nil end if r1 r0 = r1 else i7, s7 = index, [] r8 = _nt_scientific_name_1 s7 << r8 if r8 r9 = _nt_space s7 << r9 if r9 r10 = _nt_hybrid_character s7 << r10 if r10 r11 = _nt_space s7 << r11 if r11 if has_terminal?('\G[\\?]', true, index) r13 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r13 = nil end if r13 r12 = r13 else r12 = instantiate_node(SyntaxNode,input, index...index) end s7 << r12 end end end end if s7.last r7 = instantiate_node(SyntaxNode,input, i7...index, s7) r7.extend(ScientificName42) r7.extend(ScientificName43) else @index = i7 r7 = nil end if r7 r0 = r7 else r14 = _nt_scientific_name_3 if r14 r0 = r14 else @index = i0 r0 = nil end end end node_cache[:scientific_name_4][start_index] = r0 r0 end |
#_nt_scientific_name_5 ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 122 def _nt_scientific_name_5 start_index = index if node_cache[:scientific_name_5].has_key?(index) cached = node_cache[:scientific_name_5][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_scientific_name_1 s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_taxon_concept_rank s1 << r4 if r4 r5 = _nt_space s1 << r5 if r5 r6 = s1 << r6 end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(ScientificName50) r1.extend(ScientificName51) else @index = i1 r1 = nil end if r1 r0 = r1 else r7 = _nt_scientific_name_4 if r7 r0 = r7 else @index = i0 r0 = nil end end node_cache[:scientific_name_5][start_index] = r0 r0 end |
#_nt_simple_authorship ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3225 def start_index = index if node_cache[:simple_authorship].has_key?(index) cached = node_cache[:simple_authorship][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 if has_terminal?('\G[,]', true, index) r5 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r5 = nil end if r5 r4 = r5 else r4 = instantiate_node(SyntaxNode,input, index...index) end s1 << r4 if r4 r6 = _nt_space s1 << r6 if r6 r8 = _nt_year if r8 r7 = r8 else r7 = instantiate_node(SyntaxNode,input, index...index) end s1 << r7 if r7 if has_terminal?('\G[,]', true, index) r10 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r10 = nil end if r10 r9 = r10 else r9 = instantiate_node(SyntaxNode,input, index...index) end s1 << r9 if r9 r11 = _nt_space s1 << r11 if r11 if has_terminal?("non", false, index) r12 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("non") r12 = nil end s1 << r12 if r12 r13 = _nt_space s1 << r13 if r13 r14 = s1 << r14 if r14 r15 = _nt_space s1 << r15 if r15 if has_terminal?('\G[,]', true, index) r17 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r17 = nil end if r17 r16 = r17 else r16 = instantiate_node(SyntaxNode,input, index...index) end s1 << r16 if r16 r18 = _nt_space s1 << r18 if r18 r19 = _nt_year s1 << r19 end end end end end end end end end end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(SimpleAuthorship0) r1.extend(SimpleAuthorship1) else @index = i1 r1 = nil end if r1 r0 = r1 else i20, s20 = index, [] r21 = s20 << r21 if r21 r22 = _nt_space s20 << r22 if r22 if has_terminal?('\G[,]', true, index) r24 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r24 = nil end if r24 r23 = r24 else r23 = instantiate_node(SyntaxNode,input, index...index) end s20 << r23 if r23 r25 = _nt_space s20 << r25 if r25 r26 = _nt_year s20 << r26 end end end end if s20.last r20 = instantiate_node(SyntaxNode,input, i20...index, s20) r20.extend(SimpleAuthorship2) r20.extend(SimpleAuthorship3) else @index = i20 r20 = nil end if r20 r0 = r20 else r27 = r27.extend(SimpleAuthorship4) if r27 r0 = r27 else @index = i0 r0 = nil end end end node_cache[:simple_authorship][start_index] = r0 r0 end |
#_nt_space ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5924 def _nt_space start_index = index if node_cache[:space].has_key?(index) cached = node_cache[:space][index] @index = cached.interval.end if cached return cached end s0, i0 = [], index loop do if has_terminal?('\G[\\s]', true, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r1 = nil end if r1 s0 << r1 else break end end r0 = instantiate_node(SyntaxNode,input, i0...index, s0) node_cache[:space][start_index] = r0 r0 end |
#_nt_space_hard ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5953 def _nt_space_hard start_index = index if node_cache[:space_hard].has_key?(index) cached = node_cache[:space_hard][index] @index = cached.interval.end if cached return cached end s0, i0 = [], index loop do if has_terminal?('\G[\\s]', true, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r1 = nil end if r1 s0 << r1 else break end end if s0.empty? @index = i0 r0 = nil else r0 = instantiate_node(SyntaxNode,input, i0...index, s0) end node_cache[:space_hard][start_index] = r0 r0 end |
#_nt_species ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 1972 def _nt_species start_index = index if node_cache[:species].has_key?(index) cached = node_cache[:species][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_species_epitheton s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(Species0) r1.extend(Species1) else @index = i1 r1 = nil end if r1 r0 = r1 else r5 = _nt_species_epitheton if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:species][start_index] = r0 r0 end |
#_nt_species_epitheton ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 2078 def _nt_species_epitheton start_index = index if node_cache[:species_epitheton].has_key?(index) cached = node_cache[:species_epitheton][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_species_word s1 << r2 if r2 i3 = index i4, s4 = index, [] r5 = _nt_space_hard s4 << r5 if r5 r6 = s4 << r6 if r6 r7 = _nt_space_hard s4 << r7 end end if s4.last r4 = instantiate_node(SyntaxNode,input, i4...index, s4) r4.extend(SpeciesEpitheton0) else @index = i4 r4 = nil end if r4 @index = i3 r3 = instantiate_node(SyntaxNode,input, index...index) else r3 = nil end s1 << r3 end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(SpeciesEpitheton1) r1.extend(SpeciesEpitheton2) else @index = i1 r1 = nil end if r1 r0 = r1 else r8 = _nt_species_word r8.extend(SpeciesEpitheton3) if r8 r0 = r8 else r9 = _nt_species_word_hybrid if r9 r0 = r9 else @index = i0 r0 = nil end end end node_cache[:species_epitheton][start_index] = r0 r0 end |
#_nt_species_prefix ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5041 def _nt_species_prefix start_index = index if node_cache[:species_prefix].has_key?(index) cached = node_cache[:species_prefix][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] i1 = index if has_terminal?("aff.", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("aff.") r2 = nil end if r2 r1 = r2 else if has_terminal?("corrig.", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 7)) @index += 7 else terminal_parse_failure("corrig.") r3 = nil end if r3 r1 = r3 else if has_terminal?("?", false, index) r4 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("?") r4 = nil end if r4 r1 = r4 else @index = i1 r1 = nil end end end s0 << r1 if r1 i5 = index r6 = _nt_space_hard if r6 @index = i5 r5 = instantiate_node(SyntaxNode,input, index...index) else r5 = nil end s0 << r5 end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(SpeciesPrefix0) else @index = i0 r0 = nil end node_cache[:species_prefix][start_index] = r0 r0 end |
#_nt_species_word ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5127 def _nt_species_word start_index = index if node_cache[:species_word].has_key?(index) cached = node_cache[:species_word][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] s2, i2 = [], index loop do if has_terminal?('\G[0-9]', true, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r3 = nil end if r3 s2 << r3 else break end end if s2.empty? @index = i2 r2 = nil else r2 = instantiate_node(SyntaxNode,input, i2...index, s2) end s1 << r2 if r2 if has_terminal?("-", false, index) r5 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("-") r5 = nil end if r5 r4 = r5 else r4 = instantiate_node(SyntaxNode,input, index...index) end s1 << r4 if r4 r6 = _nt_latin_word s1 << r6 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(SpeciesWord0) r1.extend(SpeciesWord1) else @index = i1 r1 = nil end if r1 r0 = r1 else r7 = _nt_latin_word if r7 r0 = r7 else @index = i0 r0 = nil end end node_cache[:species_word][start_index] = r0 r0 end |
#_nt_species_word_hybrid ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 4940 def _nt_species_word_hybrid start_index = index if node_cache[:species_word_hybrid].has_key?(index) cached = node_cache[:species_word_hybrid][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_multiplication_sign s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_species_word s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(SpeciesWordHybrid0) r1.extend(SpeciesWordHybrid1) else @index = i1 r1 = nil end if r1 r0 = r1 else i5, s5 = index, [] if has_terminal?("X", false, index) r6 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("X") r6 = nil end s5 << r6 if r6 r7 = _nt_space s5 << r7 if r7 r8 = _nt_species_word s5 << r8 end end if s5.last r5 = instantiate_node(SyntaxNode,input, i5...index, s5) r5.extend(SpeciesWordHybrid2) r5.extend(SpeciesWordHybrid3) else @index = i5 r5 = nil end if r5 r0 = r5 else i9, s9 = index, [] if has_terminal?("x", false, index) r10 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else terminal_parse_failure("x") r10 = nil end s9 << r10 if r10 r11 = _nt_space_hard s9 << r11 if r11 r12 = _nt_species_word s9 << r12 end end if s9.last r9 = instantiate_node(SyntaxNode,input, i9...index, s9) r9.extend(SpeciesWordHybrid4) r9.extend(SpeciesWordHybrid5) else @index = i9 r9 = nil end if r9 r0 = r9 else @index = i0 r0 = nil end end end node_cache[:species_word_hybrid][start_index] = r0 r0 end |
#_nt_status_part ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 566 def _nt_status_part start_index = index if node_cache[:status_part].has_key?(index) cached = node_cache[:status_part][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_status_word s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 r4 = _nt_status_part s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(StatusPart0) r1.extend(StatusPart1) else @index = i1 r1 = nil end if r1 r0 = r1 else r5 = _nt_status_word if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:status_part][start_index] = r0 r0 end |
#_nt_status_word ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 627 def _nt_status_word start_index = index if node_cache[:status_word].has_key?(index) cached = node_cache[:status_word][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] r1 = _nt_latin_word s0 << r1 if r1 if has_terminal?('\G[\\.]', true, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r2 = nil end s0 << r2 end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(StatusWord0) r0.extend(StatusWord1) else @index = i0 r0 = nil end node_cache[:status_word][start_index] = r0 r0 end |
#_nt_subgenus ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 2189 def _nt_subgenus start_index = index if node_cache[:subgenus].has_key?(index) cached = node_cache[:subgenus][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] r1 = _nt_left_paren s0 << r1 if r1 r2 = _nt_space s0 << r2 if r2 r3 = _nt_cap_latin_word s0 << r3 if r3 r4 = _nt_space s0 << r4 if r4 r5 = _nt_right_paren s0 << r5 end end end end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(Subgenus0) r0.extend(Subgenus1) else @index = i0 r0 = nil end node_cache[:subgenus][start_index] = r0 r0 end |
#_nt_taxon_concept_rank ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 1348 def _nt_taxon_concept_rank start_index = index if node_cache[:taxon_concept_rank].has_key?(index) cached = node_cache[:taxon_concept_rank][index] @index = cached.interval.end if cached return cached end i0 = index if has_terminal?("sec.", false, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 4)) @index += 4 else terminal_parse_failure("sec.") r1 = nil end if r1 r0 = r1 r0.extend(TaxonConceptRank0) else if has_terminal?("sensu.", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 6)) @index += 6 else terminal_parse_failure("sensu.") r2 = nil end if r2 r0 = r2 r0.extend(TaxonConceptRank0) else @index = i0 r0 = nil end end node_cache[:taxon_concept_rank][start_index] = r0 r0 end |
#_nt_uninomial_epitheton ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 2429 def _nt_uninomial_epitheton start_index = index if node_cache[:uninomial_epitheton].has_key?(index) cached = node_cache[:uninomial_epitheton][index] @index = cached.interval.end if cached return cached end r0 = _nt_cap_latin_word r0.extend(UninomialEpitheton0) node_cache[:uninomial_epitheton][start_index] = r0 r0 end |
#_nt_uninomial_name ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 2366 def _nt_uninomial_name start_index = index if node_cache[:uninomial_name].has_key?(index) cached = node_cache[:uninomial_name][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_uninomial_epitheton s1 << r2 if r2 r3 = _nt_space_hard s1 << r3 if r3 r4 = s1 << r4 end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(UninomialName0) r1.extend(UninomialName1) else @index = i1 r1 = nil end if r1 r0 = r1 else r5 = _nt_uninomial_epitheton if r5 r0 = r5 else @index = i0 r0 = nil end end node_cache[:uninomial_name][start_index] = r0 r0 end |
#_nt_unknown_auth ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 3505 def _nt_unknown_auth start_index = index if node_cache[:unknown_auth].has_key?(index) cached = node_cache[:unknown_auth][index] @index = cached.interval.end if cached return cached end i0 = index if has_terminal?("auct.", false, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("auct.") r1 = nil end if r1 r0 = r1 r0.extend(UnknownAuth0) else if has_terminal?("hort.", false, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("hort.") r2 = nil end if r2 r0 = r2 r0.extend(UnknownAuth0) else if has_terminal?("anon.", false, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 5)) @index += 5 else terminal_parse_failure("anon.") r3 = nil end if r3 r0 = r3 r0.extend(UnknownAuth0) else if has_terminal?("ht.", false, index) r4 = instantiate_node(SyntaxNode,input, index...(index + 3)) @index += 3 else terminal_parse_failure("ht.") r4 = nil end if r4 r0 = r4 r0.extend(UnknownAuth0) else @index = i0 r0 = nil end end end end node_cache[:unknown_auth][start_index] = r0 r0 end |
#_nt_valid_name_letters ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5400 def _nt_valid_name_letters start_index = index if node_cache[:valid_name_letters].has_key?(index) cached = node_cache[:valid_name_letters][index] @index = cached.interval.end if cached return cached end s0, i0 = [], index loop do if has_terminal?('\G[a-z\\-ëüäöïéåóç]', true, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r1 = nil end if r1 s0 << r1 else break end end if s0.empty? @index = i0 r0 = nil else r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(ValidNameLetters0) end node_cache[:valid_name_letters][start_index] = r0 r0 end |
#_nt_year ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5577 def _nt_year start_index = index if node_cache[:year].has_key?(index) cached = node_cache[:year][index] @index = cached.interval.end if cached return cached end i0 = index i1, s1 = index, [] r2 = _nt_left_paren s1 << r2 if r2 r3 = _nt_space s1 << r3 if r3 i4 = index r5 = _nt_year_number_with_character if r5 r4 = r5 else r6 = _nt_year_number if r6 r4 = r6 else @index = i4 r4 = nil end end s1 << r4 if r4 r7 = _nt_space s1 << r7 if r7 r8 = _nt_right_paren s1 << r8 end end end end if s1.last r1 = instantiate_node(SyntaxNode,input, i1...index, s1) r1.extend(Year0) r1.extend(Year1) else @index = i1 r1 = nil end if r1 r0 = r1 else r9 = _nt_year_number_with_character if r9 r0 = r9 else r10 = _nt_year_number if r10 r0 = r10 else @index = i0 r0 = nil end end end node_cache[:year][start_index] = r0 r0 end |
#_nt_year_number ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5719 def _nt_year_number start_index = index if node_cache[:year_number].has_key?(index) cached = node_cache[:year_number][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] if has_terminal?('\G[12]', true, index) r1 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r1 = nil end s0 << r1 if r1 if has_terminal?('\G[7890]', true, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r2 = nil end s0 << r2 if r2 if has_terminal?('\G[0-9]', true, index) r3 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r3 = nil end s0 << r3 if r3 if has_terminal?('\G[0-9]', true, index) r5 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r5 = nil end if r5 r4 = r5 else r4 = instantiate_node(SyntaxNode,input, index...index) end s0 << r4 if r4 if has_terminal?('\G[\\?]', true, index) r7 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r7 = nil end if r7 r6 = r7 else r6 = instantiate_node(SyntaxNode,input, index...index) end s0 << r6 end end end end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(YearNumber0) r0.extend(YearNumber1) else @index = i0 r0 = nil end node_cache[:year_number][start_index] = r0 r0 end |
#_nt_year_number_with_character ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5668 def _nt_year_number_with_character start_index = index if node_cache[:year_number_with_character].has_key?(index) cached = node_cache[:year_number_with_character][index] @index = cached.interval.end if cached return cached end i0, s0 = index, [] r1 = _nt_year_number s0 << r1 if r1 if has_terminal?('\G[a-zA-Z]', true, index) r2 = instantiate_node(SyntaxNode,input, index...(index + 1)) @index += 1 else r2 = nil end s0 << r2 end if s0.last r0 = instantiate_node(SyntaxNode,input, i0...index, s0) r0.extend(YearNumberWithCharacter0) r0.extend(YearNumberWithCharacter1) else @index = i0 r0 = nil end node_cache[:year_number_with_character][start_index] = r0 r0 end |
#root ⇒ Object
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# File 'lib/biodiversity/parser/scientific_name_clean.rb', line 5 def root @root || :root end |