Module: ScientificNameDirty

Includes:
ScientificNameClean, Treetop::Runtime
Included in:
ScientificNameCanonical, ScientificNameDirtyParser
Defined in:
lib/biodiversity/parser/scientific_name_dirty.rb

Defined Under Namespace

Modules: ApproximateYear0, ApproximateYear1, DoubleYear0, DoubleYear1, Garbage0, Garbage1, Infraspecies0, Infraspecies1, Infraspecies2, Infraspecies3, LeftParen0, PageNumber0, PageNumber1, RightParen0, ScientificName50, ScientificName51, Species0, Species1, Year0, Year1, Year2, Year3, YearNumberWithPunctuation0, YearNumberWithPunctuation1

Instance Method Summary collapse

Methods included from ScientificNameClean

#_nt_author_name, #_nt_author_prefix_word, #_nt_author_separator, #_nt_author_word, #_nt_authors_names, #_nt_authorship, #_nt_basionym_authorship_with_parenthesis, #_nt_cap_digraph, #_nt_cap_latin_word, #_nt_digraph, #_nt_ex_authorship, #_nt_ex_sep, #_nt_full_name_letters, #_nt_genus, #_nt_hybrid_character, #_nt_infraspecies_epitheton, #_nt_infraspecies_mult, #_nt_latin_word, #_nt_multinomial_name, #_nt_multiplication_sign, #_nt_rank, #_nt_rank_forma, #_nt_scientific_name_1, #_nt_scientific_name_2, #_nt_scientific_name_3, #_nt_scientific_name_4, #_nt_simple_authorship, #_nt_space, #_nt_space_hard, #_nt_species_epitheton, #_nt_species_prefix, #_nt_species_word, #_nt_species_word_hybrid, #_nt_status_part, #_nt_status_word, #_nt_subgenus, #_nt_taxon_concept_rank, #_nt_uninomial_epitheton, #_nt_uninomial_name, #_nt_unknown_auth, #_nt_valid_name_letters, #_nt_year_number, #_nt_year_number_with_character

Instance Method Details

#_nt_approximate_year ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 614

def _nt_approximate_year
  start_index = index
  if node_cache[:approximate_year].has_key?(index)
    cached = node_cache[:approximate_year][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0, s0 = index, []
  if input.index("[", index) == index
    r1 = instantiate_node(SyntaxNode,input, index...(index + 1))
    @index += 1
  else
    terminal_parse_failure("[")
    r1 = nil
  end
  s0 << r1
  if r1
    r2 = _nt_space
    s0 << r2
    if r2
      r3 = _nt_year_number
      s0 << r3
      if r3
        r4 = _nt_space
        s0 << r4
        if r4
          s5, i5 = [], index
          loop do
            if input.index("]", index) == index
              r6 = instantiate_node(SyntaxNode,input, index...(index + 1))
              @index += 1
            else
              terminal_parse_failure("]")
              r6 = nil
            end
            if r6
              s5 << r6
            else
              break
            end
          end
          if s5.empty?
            self.index = i5
            r5 = nil
          else
            r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
          end
          s0 << r5
        end
      end
    end
  end
  if s0.last
    r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
    r0.extend(ApproximateYear0)
    r0.extend(ApproximateYear1)
  else
    self.index = i0
    r0 = nil
  end

  node_cache[:approximate_year][start_index] = r0

  return r0
end

#_nt_double_year ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 702

def _nt_double_year
  start_index = index
  if node_cache[:double_year].has_key?(index)
    cached = node_cache[:double_year][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0, s0 = index, []
  r1 = _nt_year_number
  s0 << r1
  if r1
    if input.index("-", index) == index
      r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
      @index += 1
    else
      terminal_parse_failure("-")
      r2 = nil
    end
    s0 << r2
    if r2
      s3, i3 = [], index
      loop do
        if input.index(Regexp.new('[0-9]'), index) == index
          r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
          @index += 1
        else
          r4 = nil
        end
        if r4
          s3 << r4
        else
          break
        end
      end
      if s3.empty?
        self.index = i3
        r3 = nil
      else
        r3 = instantiate_node(SyntaxNode,input, i3...index, s3)
      end
      s0 << r3
      if r3
        if input.index(Regexp.new('[A-Za-z]'), index) == index
          r6 = instantiate_node(SyntaxNode,input, index...(index + 1))
          @index += 1
        else
          r6 = nil
        end
        if r6
          r5 = r6
        else
          r5 = instantiate_node(SyntaxNode,input, index...index)
        end
        s0 << r5
        if r5
          if input.index(Regexp.new('[\\?]'), index) == index
            r8 = instantiate_node(SyntaxNode,input, index...(index + 1))
            @index += 1
          else
            r8 = nil
          end
          if r8
            r7 = r8
          else
            r7 = instantiate_node(SyntaxNode,input, index...index)
          end
          s0 << r7
        end
      end
    end
  end
  if s0.last
    r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
    r0.extend(DoubleYear0)
    r0.extend(DoubleYear1)
  else
    self.index = i0
    r0 = nil
  end

  node_cache[:double_year][start_index] = r0

  return r0
end

#_nt_epitheton_authorship_inconsistencies ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 914

def _nt_epitheton_authorship_inconsistencies
  start_index = index
  if node_cache[:epitheton_authorship_inconsistencies].has_key?(index)
    cached = node_cache[:epitheton_authorship_inconsistencies][index]
    @index = cached.interval.end if cached
    return cached
  end

  if input.index("corrig.", index) == index
    r0 = instantiate_node(SyntaxNode,input, index...(index + 7))
    @index += 7
  else
    terminal_parse_failure("corrig.")
    r0 = nil
  end

  node_cache[:epitheton_authorship_inconsistencies][start_index] = r0

  return r0
end

#_nt_garbage ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 953

def _nt_garbage
  start_index = index
  if node_cache[:garbage].has_key?(index)
    cached = node_cache[:garbage][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0 = index
  i1, s1 = index, []
  r2 = _nt_space
  s1 << r2
  if r2
    if input.index(Regexp.new('["\',.]'), index) == index
      r3 = instantiate_node(SyntaxNode,input, index...(index + 1))
      @index += 1
    else
      r3 = nil
    end
    s1 << r3
    if r3
      r4 = _nt_space
      s1 << r4
      if r4
        s5, i5 = [], index
        loop do
          if input.index(Regexp.new('[^щ]'), index) == index
            r6 = instantiate_node(SyntaxNode,input, index...(index + 1))
            @index += 1
          else
            r6 = nil
          end
          if r6
            s5 << r6
          else
            break
          end
        end
        r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
        s1 << r5
      end
    end
  end
  if s1.last
    r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
    r1.extend(Garbage0)
  else
    self.index = i1
    r1 = nil
  end
  if r1
    r0 = r1
  else
    i7, s7 = index, []
    r8 = _nt_space_hard
    s7 << r8
    if r8
      s9, i9 = [], index
      loop do
        if input.index(Regexp.new('[^ш]'), index) == index
          r10 = instantiate_node(SyntaxNode,input, index...(index + 1))
          @index += 1
        else
          r10 = nil
        end
        if r10
          s9 << r10
        else
          break
        end
      end
      if s9.empty?
        self.index = i9
        r9 = nil
      else
        r9 = instantiate_node(SyntaxNode,input, i9...index, s9)
      end
      s7 << r9
    end
    if s7.last
      r7 = instantiate_node(SyntaxNode,input, i7...index, s7)
      r7.extend(Garbage1)
    else
      self.index = i7
      r7 = nil
    end
    if r7
      r0 = r7
    else
      self.index = i0
      r0 = nil
    end
  end

  node_cache[:garbage][start_index] = r0

  return r0
end

#_nt_infraspecies ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 167

def _nt_infraspecies
  start_index = index
  if node_cache[:infraspecies].has_key?(index)
    cached = node_cache[:infraspecies][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0 = index
  i1, s1 = index, []
  r2 = _nt_infraspecies_epitheton
  s1 << r2
  if r2
    r3 = _nt_space
    s1 << r3
    if r3
      r4 = _nt_year
      s1 << r4
    end
  end
  if s1.last
    r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
    r1.extend(Infraspecies0)
    r1.extend(Infraspecies1)
  else
    self.index = i1
    r1 = nil
  end
  if r1
    r0 = r1
  else
    i5, s5 = index, []
    r6 = _nt_infraspecies_epitheton
    s5 << r6
    if r6
      r7 = _nt_space
      s5 << r7
      if r7
        r8 = _nt_epitheton_authorship_inconsistencies
        s5 << r8
        if r8
          r9 = _nt_space
          s5 << r9
          if r9
            r10 = _nt_authorship
            s5 << r10
          end
        end
      end
    end
    if s5.last
      r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
      r5.extend(Infraspecies2)
      r5.extend(Infraspecies3)
    else
      self.index = i5
      r5 = nil
    end
    if r5
      r0 = r5
    else
      r11 = super
      if r11
        r0 = r11
      else
        self.index = i0
        r0 = nil
      end
    end
  end

  node_cache[:infraspecies][start_index] = r0

  return r0
end

#_nt_left_paren ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 390

def _nt_left_paren
  start_index = index
  if node_cache[:left_paren].has_key?(index)
    cached = node_cache[:left_paren][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0 = index
  i1, s1 = index, []
  if input.index("(", index) == index
    r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
    @index += 1
  else
    terminal_parse_failure("(")
    r2 = nil
  end
  s1 << r2
  if r2
    r3 = _nt_space
    s1 << r3
    if r3
      if input.index("(", index) == index
        r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
        @index += 1
      else
        terminal_parse_failure("(")
        r4 = nil
      end
      s1 << r4
    end
  end
  if s1.last
    r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
    r1.extend(LeftParen0)
  else
    self.index = i1
    r1 = nil
  end
  if r1
    r0 = r1
  else
    r5 = super
    if r5
      r0 = r5
    else
      self.index = i0
      r0 = nil
    end
  end

  node_cache[:left_paren][start_index] = r0

  return r0
end

#_nt_page_number ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 856

def _nt_page_number
  start_index = index
  if node_cache[:page_number].has_key?(index)
    cached = node_cache[:page_number][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0, s0 = index, []
  if input.index(":", index) == index
    r1 = instantiate_node(SyntaxNode,input, index...(index + 1))
    @index += 1
  else
    terminal_parse_failure(":")
    r1 = nil
  end
  s0 << r1
  if r1
    r2 = _nt_space
    s0 << r2
    if r2
      s3, i3 = [], index
      loop do
        if input.index(Regexp.new('[\\d]'), index) == index
          r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
          @index += 1
        else
          r4 = nil
        end
        if r4
          s3 << r4
        else
          break
        end
      end
      if s3.empty?
        self.index = i3
        r3 = nil
      else
        r3 = instantiate_node(SyntaxNode,input, i3...index, s3)
      end
      s0 << r3
    end
  end
  if s0.last
    r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
    r0.extend(PageNumber0)
    r0.extend(PageNumber1)
  else
    self.index = i0
    r0 = nil
  end

  node_cache[:page_number][start_index] = r0

  return r0
end

#_nt_right_paren ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 327

def _nt_right_paren
  start_index = index
  if node_cache[:right_paren].has_key?(index)
    cached = node_cache[:right_paren][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0 = index
  i1, s1 = index, []
  if input.index(")", index) == index
    r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
    @index += 1
  else
    terminal_parse_failure(")")
    r2 = nil
  end
  s1 << r2
  if r2
    r3 = _nt_space
    s1 << r3
    if r3
      if input.index(")", index) == index
        r4 = instantiate_node(SyntaxNode,input, index...(index + 1))
        @index += 1
      else
        terminal_parse_failure(")")
        r4 = nil
      end
      s1 << r4
    end
  end
  if s1.last
    r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
    r1.extend(RightParen0)
  else
    self.index = i1
    r1 = nil
  end
  if r1
    r0 = r1
  else
    r5 = super
    if r5
      r0 = r5
    else
      self.index = i0
      r0 = nil
    end
  end

  node_cache[:right_paren][start_index] = r0

  return r0
end

#_nt_root ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 11

def _nt_root
  start_index = index
  if node_cache[:root].has_key?(index)
    cached = node_cache[:root][index]
    @index = cached.interval.end if cached
    return cached
  end

  r0 = super

  node_cache[:root][start_index] = r0

  return r0
end

#_nt_scientific_name_5 ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 54

def _nt_scientific_name_5
  start_index = index
  if node_cache[:scientific_name_5].has_key?(index)
    cached = node_cache[:scientific_name_5][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0 = index
  i1, s1 = index, []
  r2 = _nt_scientific_name_4
  s1 << r2
  if r2
    r3 = _nt_garbage
    s1 << r3
  end
  if s1.last
    r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
    r1.extend(ScientificName50)
    r1.extend(ScientificName51)
  else
    self.index = i1
    r1 = nil
  end
  if r1
    r0 = r1
  else
    r4 = super
    if r4
      r0 = r4
    else
      self.index = i0
      r0 = nil
    end
  end

  node_cache[:scientific_name_5][start_index] = r0

  return r0
end

#_nt_species ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 275

def _nt_species
  start_index = index
  if node_cache[:species].has_key?(index)
    cached = node_cache[:species][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0 = index
  i1, s1 = index, []
  r2 = _nt_species_epitheton
  s1 << r2
  if r2
    r3 = _nt_space
    s1 << r3
    if r3
      r4 = _nt_year
      s1 << r4
    end
  end
  if s1.last
    r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
    r1.extend(Species0)
    r1.extend(Species1)
  else
    self.index = i1
    r1 = nil
  end
  if r1
    r0 = r1
  else
    r5 = super
    if r5
      r0 = r5
    else
      self.index = i0
      r0 = nil
    end
  end

  node_cache[:species][start_index] = r0

  return r0
end

#_nt_year ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 502

def _nt_year
  start_index = index
  if node_cache[:year].has_key?(index)
    cached = node_cache[:year][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0 = index
  i1, s1 = index, []
  r2 = _nt_year_number
  s1 << r2
  if r2
    r3 = _nt_space
    s1 << r3
    if r3
      r4 = _nt_approximate_year
      s1 << r4
    end
  end
  if s1.last
    r1 = instantiate_node(SyntaxNode,input, i1...index, s1)
    r1.extend(Year0)
    r1.extend(Year1)
  else
    self.index = i1
    r1 = nil
  end
  if r1
    r0 = r1
  else
    i5, s5 = index, []
    r6 = _nt_year_number
    s5 << r6
    if r6
      r7 = _nt_space
      s5 << r7
      if r7
        r8 = _nt_page_number
        s5 << r8
      end
    end
    if s5.last
      r5 = instantiate_node(SyntaxNode,input, i5...index, s5)
      r5.extend(Year2)
      r5.extend(Year3)
    else
      self.index = i5
      r5 = nil
    end
    if r5
      r0 = r5
    else
      r9 = _nt_year_number_with_punctuation
      if r9
        r0 = r9
      else
        r10 = _nt_approximate_year
        if r10
          r0 = r10
        else
          r11 = _nt_double_year
          if r11
            r0 = r11
          else
            r12 = super
            if r12
              r0 = r12
            else
              self.index = i0
              r0 = nil
            end
          end
        end
      end
    end
  end

  node_cache[:year][start_index] = r0

  return r0
end

#_nt_year_number_with_punctuation ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 809

def _nt_year_number_with_punctuation
  start_index = index
  if node_cache[:year_number_with_punctuation].has_key?(index)
    cached = node_cache[:year_number_with_punctuation][index]
    @index = cached.interval.end if cached
    return cached
  end

  i0, s0 = index, []
  r1 = _nt_year_number
  s0 << r1
  if r1
    if input.index(".", index) == index
      r2 = instantiate_node(SyntaxNode,input, index...(index + 1))
      @index += 1
    else
      terminal_parse_failure(".")
      r2 = nil
    end
    s0 << r2
  end
  if s0.last
    r0 = instantiate_node(SyntaxNode,input, i0...index, s0)
    r0.extend(YearNumberWithPunctuation0)
    r0.extend(YearNumberWithPunctuation1)
  else
    self.index = i0
    r0 = nil
  end

  node_cache[:year_number_with_punctuation][start_index] = r0

  return r0
end

#root ⇒ Object 



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# File 'lib/biodiversity/parser/scientific_name_dirty.rb', line 5

def root
  @root || :root
end