Class: Cumo::NArray

Inherits:
Object
  • Object
show all
Defined in:
ext/cumo/narray/narray.c,
lib/cumo/narray/extra.rb

Overview

Cumo::NArray is the abstract super class for Numerical N-dimensional Array in the Ruby/Cumo module. Use Typed Subclasses of NArray (Cumo::DFloat, Int32, etc) to create data array instances.

Constant Summary collapse

@@warn_slow_dot =
false

Class Method Summary collapse

Instance Method Summary collapse

Class Method Details

.asarray(a) ⇒ Object



114
115
116
117
118
119
120
121
122
123
# File 'lib/cumo/narray/extra.rb', line 114

def self.asarray(a)
  case a
  when NArray
    (a.ndim == 0) ? a[:new] : a
  when Numeric, Range
    self[a]
  else
    cast(a)
  end
end

.cast(a) ⇒ Object

Convert the argument to an narray if not an narray.



110
111
112
# File 'lib/cumo/narray/extra.rb', line 110

def self.cast(a)
  a.kind_of?(NArray) ? a : NArray.array_type(a).cast(a)
end

.column_stack(arrays) ⇒ Object

Stack 1-d arrays into columns of a 2-d array.

Examples:

x = Cumo::Int32[1,2,3]
y = Cumo::Int32[2,3,4]
p Cumo::NArray.column_stack([x,y])
# Cumo::Int32#shape=[3,2]
# [[1, 2],
#  [2, 3],
#  [3, 4]]


560
561
562
563
564
565
566
567
568
569
570
# File 'lib/cumo/narray/extra.rb', line 560

def column_stack(arrays)
  arys = arrays.map do |a|
    a = cast(a)
    case a.ndim
    when 0; a[:new, :new]
    when 1; a[true, :new]
    else; a
    end
  end
  concatenate(arys, axis:1)
end

.concatenate(arrays, axis: 0) ⇒ Object

Examples:

p a = Cumo::DFloat[[1, 2], [3, 4]]
# Cumo::DFloat#shape=[2,2]
# [[1, 2],
#  [3, 4]]

p b = Cumo::DFloat[[5, 6]]
# Cumo::DFloat#shape=[1,2]
# [[5, 6]]

p Cumo::NArray.concatenate([a,b],axis:0)
# Cumo::DFloat#shape=[3,2]
# [[1, 2],
#  [3, 4],
#  [5, 6]]

p Cumo::NArray.concatenate([a,b.transpose], axis:1)
# Cumo::DFloat#shape=[2,3]
# [[1, 2, 5],
#  [3, 4, 6]]


416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
# File 'lib/cumo/narray/extra.rb', line 416

def concatenate(arrays, axis:0)
  klass = (self == NArray) ? NArray.array_type(arrays) : self
  nd = 0
  arrays = arrays.map do |a|
    case a
    when NArray
      # ok
    when Numeric
      a = klass[a]
    when Array
      a = klass.cast(a)
    else
      raise TypeError, "not Cumo::NArray: #{a.inspect[0..48]}"
    end
    if a.ndim > nd
      nd = a.ndim
    end
    a
  end
  if axis < 0
    axis += nd
  end
  if axis < 0 || axis >= nd
    raise ArgumentError, "axis is out of range"
  end
  new_shape = nil
  sum_size = 0
  arrays.each do |a|
    a_shape = a.shape
    if nd != a_shape.size
      a_shape = [1] * (nd - a_shape.size) + a_shape
    end
    sum_size += a_shape.delete_at(axis)
    if new_shape
      if new_shape != a_shape
        raise ShapeError, "shape mismatch"
      end
    else
      new_shape = a_shape
    end
  end
  new_shape.insert(axis, sum_size)
  result = klass.zeros(*new_shape)
  lst = 0
  refs = [true] * nd
  arrays.each do |a|
    fst = lst
    lst = fst + (a.shape[axis - nd] || 1)
    refs[axis] = fst...lst
    result[*refs] = a
  end
  result
end

.diag_indices(m, n, k = 0) ⇒ Object

Return the k-th diagonal indices.



1050
1051
1052
1053
1054
# File 'lib/cumo/narray/extra.rb', line 1050

def self.diag_indices(m, n, k=0)
  x = Cumo::Int64.new(m, 1).seq + k
  y = Cumo::Int64.new(1, n).seq
  (x.eq y).where
end

.dstack(arrays) ⇒ Object

Stack arrays in depth wise (along third axis).

Examples:

a = Cumo::Int32[1,2,3]
b = Cumo::Int32[2,3,4]
p Cumo::NArray.dstack([a,b])
# Cumo::Int32#shape=[1,3,2]
# [[[1, 2],
#   [2, 3],
#   [3, 4]]]

a = Cumo::Int32[[1],[2],[3]]
b = Cumo::Int32[[2],[3],[4]]
p Cumo::NArray.dstack([a,b])
# Cumo::Int32#shape=[3,1,2]
# [[[1, 2]],
#  [[2, 3]],
#  [[3, 4]]]


543
544
545
546
547
548
# File 'lib/cumo/narray/extra.rb', line 543

def dstack(arrays)
  arys = arrays.map do |a|
    _atleast_3d(cast(a))
  end
  concatenate(arys, axis:2)
end

.hstack(arrays) ⇒ Object

Stack arrays horizontally (column wise).

Examples:

a = Cumo::Int32[1,2,3]
b = Cumo::Int32[2,3,4]
p Cumo::NArray.hstack([a,b])
# Cumo::Int32#shape=[6]
# [1, 2, 3, 2, 3, 4]

a = Cumo::Int32[[1],[2],[3]]
b = Cumo::Int32[[2],[3],[4]]
p Cumo::NArray.hstack([a,b])
# Cumo::Int32#shape=[3,2]
# [[1, 2],
#  [2, 3],
#  [3, 4]]


513
514
515
516
517
518
519
520
521
522
523
# File 'lib/cumo/narray/extra.rb', line 513

def hstack(arrays)
  klass = (self == NArray) ? NArray.array_type(arrays) : self
  nd = 0
  arys = arrays.map do |a|
    a = klass.cast(a)
    nd = a.ndim if a.ndim > nd
    a
  end
  dim = (nd >= 2) ? 1 : 0
  concatenate(arys, axis:dim)
end

.parse(str, split1d: /\s+/, split2d: /;?$|;/, split3d: /\s*\n(\s*\n)+/m) ⇒ Object

parse matrix like matlab, octave

Examples:

a = Cumo::DFloat.parse %[
 2 -3 5
 4 9 7
 2 -1 6
]
=> Cumo::DFloat#shape=[3,3]
[[2, -3, 5],
 [4, 9, 7],
 [2, -1, 6]]


137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
# File 'lib/cumo/narray/extra.rb', line 137

def self.parse(str, split1d:/\s+/, split2d:/;?$|;/,
               split3d:/\s*\n(\s*\n)+/m)
  a = []
  str.split(split3d).each do |block|
    b = []
    #print "b"; p block
    block.split(split2d).each do |line|
      #p line
      line.strip!
      if !line.empty?
        c = []
        line.split(split1d).each do |item|
          c << eval(item.strip) if !item.empty?
        end
        b << c if !c.empty?
      end
    end
    a << b if !b.empty?
  end
  if a.size == 1
    self.cast(a[0])
  else
    self.cast(a)
  end
end

.tril_indices(m, n, k = 0) ⇒ Object

Return the indices for the lower-triangle on and below the k-th diagonal.



1034
1035
1036
1037
1038
# File 'lib/cumo/narray/extra.rb', line 1034

def self.tril_indices(m, n, k=0)
  x = Cumo::Int64.new(m, 1).seq + k
  y = Cumo::Int64.new(1, n).seq
  (x >= y).where
end

.triu_indices(m, n, k = 0) ⇒ Object

Return the indices for the uppler-triangle on and above the k-th diagonal.



995
996
997
998
999
# File 'lib/cumo/narray/extra.rb', line 995

def self.triu_indices(m, n, k=0)
  x = Cumo::Int64.new(m, 1).seq + k
  y = Cumo::Int64.new(1, n).seq
  (x <= y).where
end

.vstack(arrays) ⇒ Object

Stack arrays vertically (row wise).

Examples:

a = Cumo::Int32[1,2,3]
b = Cumo::Int32[2,3,4]
p Cumo::NArray.vstack([a,b])
# Cumo::Int32#shape=[2,3]
# [[1, 2, 3],
#  [2, 3, 4]]

a = Cumo::Int32[[1],[2],[3]]
b = Cumo::Int32[[2],[3],[4]]
p Cumo::NArray.vstack([a,b])
# Cumo::Int32#shape=[6,1]
# [[1],
#  [2],
#  [3],
#  [2],
#  [3],
#  [4]]


490
491
492
493
494
495
# File 'lib/cumo/narray/extra.rb', line 490

def vstack(arrays)
  arys = arrays.map do |a|
    _atleast_2d(cast(a))
  end
  concatenate(arys, axis:0)
end

Instance Method Details

#append(other, axis: nil) ⇒ Object

Append values to the end of an narray.

Examples:

a = Cumo::DFloat[1, 2, 3]
p a.append([[4, 5, 6], [7, 8, 9]])
# Cumo::DFloat#shape=[9]
# [1, 2, 3, 4, 5, 6, 7, 8, 9]

a = Cumo::DFloat[[1, 2, 3]]
p a.append([[4, 5, 6], [7, 8, 9]],axis:0)
# Cumo::DFloat#shape=[3,3]
# [[1, 2, 3],
#  [4, 5, 6],
#  [7, 8, 9]]

a = Cumo::DFloat[[1, 2, 3], [4, 5, 6]]
p a.append([7, 8, 9], axis:0)
# in `append': dimension mismatch (Cumo::NArray::DimensionError)


230
231
232
233
234
235
236
237
238
239
240
241
242
243
# File 'lib/cumo/narray/extra.rb', line 230

def append(other, axis:nil)
  other = self.class.cast(other)
  if axis
    if ndim != other.ndim
      raise DimensionError, "dimension mismatch"
    end
    return concatenate(other, axis:axis)
  else
    a = self.class.zeros(size + other.size)
    a[0...size] = self[true]
    a[size..-1] = other[true]
    return a
  end
end

#concatenate(*arrays, axis: 0) ⇒ Object

Examples:

p a = Cumo::DFloat[[1, 2], [3, 4]]
# Cumo::DFloat#shape=[2,2]
# [[1, 2],
#  [3, 4]]

p b = Cumo::DFloat[[5, 6]]
# Cumo::DFloat#shape=[1,2]
# [[5, 6]]

p a.concatenate(b,axis:0)
# Cumo::DFloat#shape=[3,2]
# [[1, 2],
#  [3, 4],
#  [5, 6]]

p a.concatenate(b.transpose, axis:1)
# Cumo::DFloat#shape=[2,3]
# [[1, 2, 5],
#  [3, 4, 6]]


615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
# File 'lib/cumo/narray/extra.rb', line 615

def concatenate(*arrays, axis:0)
  axis = check_axis(axis)
  self_shape = shape
  self_shape.delete_at(axis)
  sum_size = shape[axis]
  arrays.map! do |a|
    case a
    when NArray
      # ok
    when Numeric
      a = self.class.new(1).store(a)
    when Array
      a = self.class.cast(a)
    else
      raise TypeError, "not Cumo::NArray: #{a.inspect[0..48]}"
    end
    if a.ndim > ndim
      raise ShapeError, "dimension mismatch"
    end
    a_shape = a.shape
    sum_size += a_shape.delete_at(axis - ndim) || 1
    if self_shape != a_shape
      raise ShapeError, "shape mismatch"
    end
    a
  end
  self_shape.insert(axis, sum_size)
  result = self.class.zeros(*self_shape)
  lst = shape[axis]
  refs = [true] * ndim
  refs[axis] = 0...lst
  result[*refs] = self
  arrays.each do |a|
    fst = lst
    lst = fst + (a.shape[axis - ndim] || 1)
    refs[axis] = fst...lst
    result[*refs] = a
  end
  result
end

#cov(y = nil, ddof: 1, fweights: nil, aweights: nil) ⇒ Object

under construction



1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
1257
1258
1259
1260
1261
1262
# File 'lib/cumo/narray/extra.rb', line 1222

def cov(y=nil, ddof:1, fweights:nil, aweights:nil)
  if y
    m = NArray.vstack([self, y])
  else
    m = self
  end
  w = nil
  if fweights
    f = fweights
    w = f
  end
  if aweights
    a = aweights
    w = w ? w * a : a
  end
  if w
    w_sum = w.sum(axis:-1, keepdims:true)
    if ddof == 0
      fact = w_sum
    elsif aweights.nil?
      fact = w_sum - ddof
    else
      wa_sum = (w * a).sum(axis:-1, keepdims:true)
      fact = w_sum - ddof * wa_sum / w_sum
    end
    if (fact <= 0).any?
      raise StandardError, "Degrees of freedom <= 0 for slice"
    end
  else
    fact = m.shape[-1] - ddof
  end
  if w
    m -= (m * w).sum(axis:-1, keepdims:true) / w_sum
    mw = m * w
  else
    m -= m.mean(axis:-1, keepdims:true)
    mw = m
  end
  mt = (m.ndim < 2) ? m : m.swapaxes(-2, -1)
  mw.dot(mt.conj) / fact
end

#deg2radObject

Convert angles from degrees to radians.



32
33
34
# File 'lib/cumo/narray/extra.rb', line 32

def deg2rad
  self * (Math::PI / 180)
end

#delete(indice, axis = nil) ⇒ Object

Examples:

a = Cumo::DFloat[[1,2,3,4], [5,6,7,8], [9,10,11,12]]
p a.delete(1,0)
# Cumo::DFloat(view)#shape=[2,4]
# [[1, 2, 3, 4],
#  [9, 10, 11, 12]]

p a.delete((0..-1).step(2),1)
# Cumo::DFloat(view)#shape=[3,2]
# [[2, 4],
#  [6, 8],
#  [10, 12]]

p a.delete([1,3,5])
# Cumo::DFloat(view)#shape=[9]
# [1, 3, 5, 7, 8, 9, 10, 11, 12]


265
266
267
268
269
270
271
272
273
274
275
276
277
# File 'lib/cumo/narray/extra.rb', line 265

def delete(indice, axis=nil)
  if axis
    bit = Bit.ones(shape[axis])
    bit[indice] = 0
    idx = [true] * ndim
    idx[axis] = bit.where
    return self[*idx].copy
  else
    bit = Bit.ones(size)
    bit[indice] = 0
    return self[bit.where].copy
  end
end

#diag(k = 0) ⇒ Object

Return a matrix whose diagonal is constructed by self along the last axis.



1057
1058
1059
1060
1061
1062
1063
# File 'lib/cumo/narray/extra.rb', line 1057

def diag(k=0)
  *shp, n = shape
  n += k.abs
  a = self.class.zeros(*shp, n, n)
  a.diagonal(k).store(self)
  a
end

#diag_indices(k = 0) ⇒ Object

Return the k-th diagonal indices.



1041
1042
1043
1044
1045
1046
1047
# File 'lib/cumo/narray/extra.rb', line 1041

def diag_indices(k=0)
  if ndim < 2
    raise NArray::ShapeError, "must be >= 2-dimensional array"
  end
  m, n = shape[-2..-1]
  NArray.diag_indices(m, n, k)
end

#diff(n = 1, axis: -1)) ⇒ Object

Calculate the n-th discrete difference along given axis.

Examples:

p x = Cumo::DFloat[1, 2, 4, 7, 0]
# Cumo::DFloat#shape=[5]
# [1, 2, 4, 7, 0]

p x.diff
# Cumo::DFloat#shape=[4]
# [1, 2, 3, -7]

p x.diff(2)
# Cumo::DFloat#shape=[3]
# [1, 1, -10]

p x = Cumo::DFloat[[1, 3, 6, 10], [0, 5, 6, 8]]
# Cumo::DFloat#shape=[2,4]
# [[1, 3, 6, 10],
#  [0, 5, 6, 8]]

p x.diff
# Cumo::DFloat#shape=[2,3]
# [[2, 3, 4],
#  [5, 1, 2]]

p x.diff(axis:0)
# Cumo::DFloat#shape=[1,4]
# [[-1, 2, 0, -2]]


935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
# File 'lib/cumo/narray/extra.rb', line 935

def diff(n=1, axis:-1)
  axis = check_axis(axis)
  if n < 0 || n >= shape[axis]
    raise ShapeError, "n=#{n} is invalid for shape[#{axis}]=#{shape[axis]}"
  end
  # calculate polynomial coefficient
  c = self.class[-1, 1]
  2.upto(n) do |i|
    x = self.class.zeros(i + 1)
    x[0..-2] = c
    y = self.class.zeros(i + 1)
    y[1..-1] = c
    c = y - x
  end
  s = [true] * ndim
  s[axis] = n..-1
  result = self[*s].dup
  sum = result.inplace
  (n - 1).downto(0) do |i|
    s = [true] * ndim
    s[axis] = i..-n - 1 + i
    sum + self[*s] * c[i] # inplace addition
  end
  return result
end

#dot(b) ⇒ Cumo::NArray

Dot product of two arrays.

Parameters:

Returns:



1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
# File 'lib/cumo/narray/extra.rb', line 1086

def dot(b)
  t = self.class::UPCAST[b.class]
  if self.ndim == 0 and b.ndim == 0
    return self * b
  end
  if [SFloat, DFloat, SComplex, DComplex].include?(t)
    b = self.class.asarray(b)
    case self.ndim
    when 1
      case b.ndim
      when 1
        self.mulsum(b, axis:-1)
      else
        self[:new, false].gemm(b).flatten
      end
    else
      case b.ndim
      when 1
        self.gemm(b[false, :new]).flatten
      else
        self.gemm(b)
      end
    end
  else
    b = self.class.asarray(b)
    case b.ndim
    when 1
      mulsum(b, axis:-1)
    else
      case ndim
      when 0
        b.mulsum(self, axis:-2)
      when 1
        self[true, :new].mulsum(b, axis:-2)
      else
        unless @@warn_slow_dot
          nx = 200
          ns = 200000
          am, an = shape[-2..-1]
          bm, bn = b.shape[-2..-1]
          if am > nx && an > nx && bm > nx && bn > nx &&
              size > ns && b.size > ns
            @@warn_slow_dot = true
            warn "\nwarning: matrix dot for #{t} is slow. Consider SFloat, DFloat, SComplex, or DComplex to use cuBLAS.\n\n"
          end
        end
        self[false, :new].mulsum(b[false, :new, true, true], axis:-2)
      end
    end
  end
end

#dsplit(indices_or_sections) ⇒ Object



761
762
763
# File 'lib/cumo/narray/extra.rb', line 761

def dsplit(indices_or_sections)
  split(indices_or_sections, axis:2)
end

#each_over_axis(axis = 0) ⇒ Object

Iterate over an axis @ example

> a = Cumo::DFloat.new(2,2,2).seq
> p a
Cumo::DFloat#shape=[2,2,2]
[[[0, 1],
  [2, 3]],
 [[4, 5],
  [6, 7]]]

> a.each_over_axis{|i| p i}
Cumo::DFloat(view)#shape=[2,2]
[[0, 1],
 [2, 3]]
Cumo::DFloat(view)#shape=[2,2]
[[4, 5],
 [6, 7]]

> a.each_over_axis(1){|i| p i}
Cumo::DFloat(view)#shape=[2,2]
[[0, 1],
 [4, 5]]
Cumo::DFloat(view)#shape=[2,2]
[[2, 3],
 [6, 7]]


190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
# File 'lib/cumo/narray/extra.rb', line 190

def each_over_axis(axis=0)
  unless block_given?
    return to_enum(:each_over_axis, axis)
  end
  if ndim == 0
    if axis != 0
      raise ArgumentError, "axis=#{axis} is invalid"
    end
    niter = 1
  else
    axis = check_axis(axis)
    niter = shape[axis]
  end
  idx = [true] * ndim
  niter.times do |i|
    idx[axis] = i
    yield(self[*idx])
  end
  self
end

#fliplrObject

Flip each row in the left/right direction. Same as ‘a[true, (-1..0).step(-1), …]`.



38
39
40
# File 'lib/cumo/narray/extra.rb', line 38

def fliplr
  reverse(1)
end

#flipudObject

Flip each column in the up/down direction. Same as ‘a[(-1..0).step(-1), …]`.



44
45
46
# File 'lib/cumo/narray/extra.rb', line 44

def flipud
  reverse(0)
end

#hsplit(indices_or_sections) ⇒ Object



757
758
759
# File 'lib/cumo/narray/extra.rb', line 757

def hsplit(indices_or_sections)
  split(indices_or_sections, axis:1)
end

#inner(b, axis: -1)) ⇒ Cumo::NArray

Inner product of two arrays. Same as ‘(a*b).sum(axis:-1)`.

Parameters:

  • b (Cumo::NArray)
  • axis (Integer) (defaults to: -1))

    applied axis

Returns:



1144
1145
1146
# File 'lib/cumo/narray/extra.rb', line 1144

def inner(b, axis:-1)
  mulsum(b, axis:axis)
end

#insert(indice, values, axis: nil) ⇒ Object

Insert values along the axis before the indices.

Examples:

p a = Cumo::DFloat[[1, 2], [3, 4]]
a = Cumo::Int32[[1, 1], [2, 2], [3, 3]]

p a.insert(1,5)
# Cumo::Int32#shape=[7]
# [1, 5, 1, 2, 2, 3, 3]

p a.insert(1, 5, axis:1)
# Cumo::Int32#shape=[3,3]
# [[1, 5, 1],
#  [2, 5, 2],
#  [3, 5, 3]]

p a.insert([1], [[11],[12],[13]], axis:1)
# Cumo::Int32#shape=[3,3]
# [[1, 11, 1],
#  [2, 12, 2],
#  [3, 13, 3]]

p a.insert(1, [11, 12, 13], axis:1)
# Cumo::Int32#shape=[3,3]
# [[1, 11, 1],
#  [2, 12, 2],
#  [3, 13, 3]]

p a.insert([1], [11, 12, 13], axis:1)
# Cumo::Int32#shape=[3,5]
# [[1, 11, 12, 13, 1],
#  [2, 11, 12, 13, 2],
#  [3, 11, 12, 13, 3]]

p b = a.flatten
# Cumo::Int32(view)#shape=[6]
# [1, 1, 2, 2, 3, 3]

p b.insert(2,[15,16])
# Cumo::Int32#shape=[8]
# [1, 1, 15, 16, 2, 2, 3, 3]

p b.insert([2,2],[15,16])
# Cumo::Int32#shape=[8]
# [1, 1, 15, 16, 2, 2, 3, 3]

p b.insert([2,1],[15,16])
# Cumo::Int32#shape=[8]
# [1, 16, 1, 15, 2, 2, 3, 3]

p b.insert([2,0,1],[15,16,17])
# Cumo::Int32#shape=[9]
# [16, 1, 17, 1, 15, 2, 2, 3, 3]

p b.insert(2..3, [15, 16])
# Cumo::Int32#shape=[8]
# [1, 1, 15, 2, 16, 2, 3, 3]

p b.insert(2, [7.13, 0.5])
# Cumo::Int32#shape=[8]
# [1, 1, 7, 0, 2, 2, 3, 3]

p x = Cumo::DFloat.new(2,4).seq
# Cumo::DFloat#shape=[2,4]
# [[0, 1, 2, 3],
#  [4, 5, 6, 7]]

p x.insert([1,3],999,axis:1)
# Cumo::DFloat#shape=[2,6]
# [[0, 999, 1, 2, 999, 3],
#  [4, 999, 5, 6, 999, 7]]


350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
# File 'lib/cumo/narray/extra.rb', line 350

def insert(indice, values, axis:nil)
  if axis
    values = self.class.asarray(values)
    nd = values.ndim
    midx = [:new] * (ndim - nd) + [true] * nd
    case indice
    when Numeric
      midx[-nd - 1] = true
      midx[axis] = :new
    end
    values = values[*midx]
  else
    values = self.class.asarray(values).flatten
  end
  idx = Int64.asarray(indice)
  nidx = idx.size
  if nidx == 1
    nidx = values.shape[axis || 0]
    idx = idx + Int64.new(nidx).seq
  else
    sidx = idx.sort_index
    idx[sidx] += Int64.new(nidx).seq
  end
  if axis
    bit = Bit.ones(shape[axis] + nidx)
    bit[idx] = 0
    new_shape = shape
    new_shape[axis] += nidx
    a = self.class.zeros(new_shape)
    mdidx = [true] * ndim
    mdidx[axis] = bit.where
    a[*mdidx] = self
    mdidx[axis] = idx
    a[*mdidx] = values
  else
    bit = Bit.ones(size + nidx)
    bit[idx] = 0
    a = self.class.zeros(size + nidx)
    a[bit.where] = self.flatten
    a[idx] = values
  end
  return a
end

#kron(b) ⇒ Cumo::NArray

Kronecker product of two arrays.

kron(a,b)[k_0, k_1, ...] = a[i_0, i_1, ...] * b[j_0, j_1, ...]
   where:  k_n = i_n * b.shape[n] + j_n

Examples:

Cumo::DFloat[1,10,100].kron([5,6,7])
=> Cumo::DFloat#shape=[9]
[5, 6, 7, 50, 60, 70, 500, 600, 700]
Cumo::DFloat[5,6,7].kron([1,10,100])
=> Cumo::DFloat#shape=[9]
[5, 50, 500, 6, 60, 600, 7, 70, 700]
Cumo::DFloat.eye(2).kron(Cumo::DFloat.ones(2,2))
=> Cumo::DFloat#shape=[4,4]
[[1, 1, 0, 0],
 [1, 1, 0, 0],
 [0, 0, 1, 1],
 [0, 0, 1, 1]]

Parameters:

Returns:



1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
# File 'lib/cumo/narray/extra.rb', line 1208

def kron(b)
  b = NArray.cast(b)
  nda = ndim
  ndb = b.ndim
  shpa = shape
  shpb = b.shape
  adim = [:new] * (2 * [ndb - nda, 0].max) + [true, :new] * nda
  bdim = [:new] * (2 * [nda - ndb, 0].max) + [:new, true] * ndb
  shpr = (-[nda, ndb].max..-1).map { |i| (shpa[i] || 1) * (shpb[i] || 1) }
  (self[*adim] * b[*bdim]).reshape(*shpr)
end

#new_fill(value) ⇒ Object

Return an array filled with value with the same shape and type as self.



22
23
24
# File 'lib/cumo/narray/extra.rb', line 22

def new_fill(value)
  self.class.new(*shape).fill(value)
end

#new_narrayObject

Return an unallocated array with the same shape and type as self.



7
8
9
# File 'lib/cumo/narray/extra.rb', line 7

def new_narray
  self.class.new(*shape)
end

#new_onesObject

Return an array of ones with the same shape and type as self.



17
18
19
# File 'lib/cumo/narray/extra.rb', line 17

def new_ones
  self.class.ones(*shape)
end

#new_zerosObject

Return an array of zeros with the same shape and type as self.



12
13
14
# File 'lib/cumo/narray/extra.rb', line 12

def new_zeros
  self.class.zeros(*shape)
end

#outer(b, axis: nil) ⇒ Cumo::NArray

Outer product of two arrays. Same as ‘self * b`.

Examples:

a = Cumo::DFloat.ones(5)
=> Cumo::DFloat#shape=[5]
[1, 1, 1, 1, 1]
b = Cumo::DFloat.linspace(-2,2,5)
=> Cumo::DFloat#shape=[5]
[-2, -1, 0, 1, 2]
a.outer(b)
=> Cumo::DFloat#shape=[5,5]
[[-2, -1, 0, 1, 2],
 [-2, -1, 0, 1, 2],
 [-2, -1, 0, 1, 2],
 [-2, -1, 0, 1, 2],
 [-2, -1, 0, 1, 2]]

Parameters:

  • b (Cumo::NArray)
  • axis (Integer) (defaults to: nil)

    applied axis (default=-1)

Returns:



1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
# File 'lib/cumo/narray/extra.rb', line 1169

def outer(b, axis:nil)
  b = NArray.cast(b)
  if axis.nil?
    self[false, :new] * ((b.ndim == 0) ? b : b[false, :new, true])
  else
    md, nd = [ndim, b.ndim].minmax
    axis = check_axis(axis) - nd
    if axis < -md
      raise ArgumentError, "axis=#{axis} is out of range"
    end
    adim = [true] * ndim
    adim[axis + ndim + 1, 0] = :new
    bdim = [true] * b.ndim
    bdim[axis + b.ndim, 0] = :new
    self[*adim] * b[*bdim]
  end
end

#rad2degObject

Convert angles from radians to degrees.



27
28
29
# File 'lib/cumo/narray/extra.rb', line 27

def rad2deg
  self * (180 / Math::PI)
end

#repeat(arg, axis: nil) ⇒ Object

Examples:

p Cumo::NArray[3].repeat(4)
# Cumo::Int32#shape=[4]
# [3, 3, 3, 3]

p x = Cumo::NArray[[1,2],[3,4]]
# Cumo::Int32#shape=[2,2]
# [[1, 2],
#  [3, 4]]

p x.repeat(2)
# Cumo::Int32#shape=[8]
# [1, 1, 2, 2, 3, 3, 4, 4]

p x.repeat(3,axis:1)
# Cumo::Int32#shape=[2,6]
# [[1, 1, 1, 2, 2, 2],
#  [3, 3, 3, 4, 4, 4]]

p x.repeat([1,2],axis:0)
# Cumo::Int32#shape=[3,2]
# [[1, 2],
#  [3, 4],
#  [3, 4]]


873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
# File 'lib/cumo/narray/extra.rb', line 873

def repeat(arg, axis:nil)
  case axis
  when Integer
    axis = check_axis(axis)
    c = self
  when NilClass
    c = self.flatten
    axis = 0
  else
    raise ArgumentError, "invalid axis"
  end
  case arg
  when Integer
    if !arg.kind_of?(Integer) || arg < 1
      raise ArgumentError, "argument should be positive integer"
    end
    idx = c.shape[axis].times.map { |i| [i] * arg }.flatten
  else
    arg = arg.to_a
    if arg.size != c.shape[axis]
      raise ArgumentError, "repeat size shoud be equal to size along axis"
    end
    arg.each do |i|
      if !i.kind_of?(Integer) || i < 0
        raise ArgumentError, "argument should be non-negative integer"
      end
    end
    idx = arg.each_with_index.map { |a, i| [i] * a }.flatten
  end
  ref = [true] * c.ndim
  ref[axis] = idx
  c[*ref].copy
end

#rot90(k = 1, axes = [0, 1]) ⇒ Object

Rotate in the plane specified by axes.

Examples:

p a = Cumo::Int32.new(2,2).seq
# Cumo::Int32#shape=[2,2]
# [[0, 1],
#  [2, 3]]

p a.rot90
# Cumo::Int32(view)#shape=[2,2]
# [[1, 3],
#  [0, 2]]

p a.rot90(2)
# Cumo::Int32(view)#shape=[2,2]
# [[3, 2],
#  [1, 0]]

p a.rot90(3)
# Cumo::Int32(view)#shape=[2,2]
# [[2, 0],
#  [3, 1]]


69
70
71
72
73
74
75
76
77
78
79
80
# File 'lib/cumo/narray/extra.rb', line 69

def rot90(k=1, axes=[0, 1])
  case k % 4
  when 0
    view
  when 1
    swapaxes(*axes).reverse(axes[0])
  when 2
    reverse(*axes)
  when 3
    swapaxes(*axes).reverse(axes[1])
  end
end

#split(indices_or_sections, axis: 0) ⇒ Object

Examples:

p x = Cumo::DFloat.new(9).seq
# Cumo::DFloat#shape=[9]
# [0, 1, 2, 3, 4, 5, 6, 7, 8]

pp x.split(3)
# [Cumo::DFloat(view)#shape=[3]
# [0, 1, 2],
#  Cumo::DFloat(view)#shape=[3]
# [3, 4, 5],
#  Cumo::DFloat(view)#shape=[3]
# [6, 7, 8]]

p x = Cumo::DFloat.new(8).seq
# Cumo::DFloat#shape=[8]
# [0, 1, 2, 3, 4, 5, 6, 7]

pp x.split([3, 5, 6, 10])
# [Cumo::DFloat(view)#shape=[3]
# [0, 1, 2],
#  Cumo::DFloat(view)#shape=[2]
# [3, 4],
#  Cumo::DFloat(view)#shape=[1]
# [5],
#  Cumo::DFloat(view)#shape=[2]
# [6, 7],
#  Cumo::DFloat(view)#shape=[0][]]


684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
# File 'lib/cumo/narray/extra.rb', line 684

def split(indices_or_sections, axis:0)
  axis = check_axis(axis)
  size_axis = shape[axis]
  case indices_or_sections
  when Integer
    div_axis, mod_axis = size_axis.divmod(indices_or_sections)
    refs = [true] * ndim
    beg_idx = 0
    mod_axis.times.map do |i|
      end_idx = beg_idx + div_axis + 1
      refs[axis] = beg_idx ... end_idx
      beg_idx = end_idx
      self[*refs]
    end +
    (indices_or_sections - mod_axis).times.map do |i|
      end_idx = beg_idx + div_axis
      refs[axis] = beg_idx ... end_idx
      beg_idx = end_idx
      self[*refs]
    end
  when NArray
    split(indices_or_sections.to_a, axis:axis)
  when Array
    refs = [true] * ndim
    fst = 0
    (indices_or_sections + [size_axis]).map do |lst|
      lst = size_axis if lst > size_axis
      refs[axis] = (fst < size_axis) ? fst...lst : -1...-1
      fst = lst
      self[*refs]
    end
  else
    raise TypeError, "argument must be Integer or Array"
  end
end

#tile(*arg) ⇒ Object

Examples:

p a = Cumo::NArray[0,1,2]
# Cumo::Int32#shape=[3]
# [0, 1, 2]

p a.tile(2)
# Cumo::Int32#shape=[6]
# [0, 1, 2, 0, 1, 2]

p a.tile(2,2)
# Cumo::Int32#shape=[2,6]
# [[0, 1, 2, 0, 1, 2],
#  [0, 1, 2, 0, 1, 2]]

p a.tile(2,1,2)
# Cumo::Int32#shape=[2,1,6]
# [[[0, 1, 2, 0, 1, 2]],
#  [[0, 1, 2, 0, 1, 2]]]

p b = Cumo::NArray[[1, 2], [3, 4]]
# Cumo::Int32#shape=[2,2]
# [[1, 2],
#  [3, 4]]

p b.tile(2)
# Cumo::Int32#shape=[2,4]
# [[1, 2, 1, 2],
#  [3, 4, 3, 4]]

p b.tile(2,1)
# Cumo::Int32#shape=[4,2]
# [[1, 2],
#  [3, 4],
#  [1, 2],
#  [3, 4]]

p c = Cumo::NArray[1,2,3,4]
# Cumo::Int32#shape=[4]
# [1, 2, 3, 4]

p c.tile(4,1)
# Cumo::Int32#shape=[4,4]
# [[1, 2, 3, 4],
#  [1, 2, 3, 4],
#  [1, 2, 3, 4],
#  [1, 2, 3, 4]]


812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
# File 'lib/cumo/narray/extra.rb', line 812

def tile(*arg)
  arg.each do |i|
    if !i.kind_of?(Integer) || i < 1
      raise ArgumentError, "argument should be positive integer"
    end
  end
  ns = arg.size
  nd = self.ndim
  shp = self.shape
  new_shp = []
  src_shp = []
  res_shp = []
  (nd - ns).times do
    new_shp << 1
    new_shp << (n = shp.shift)
    src_shp << :new
    src_shp << true
    res_shp << n
  end
  (ns - nd).times do
    new_shp << (m = arg.shift)
    new_shp << 1
    src_shp << :new
    src_shp << :new
    res_shp << m
  end
  [nd, ns].min.times do
    new_shp << (m = arg.shift)
    new_shp << (n = shp.shift)
    src_shp << :new
    src_shp << true
    res_shp << n * m
  end
  self.class.new(*new_shp).store(self[*src_shp]).reshape(*res_shp)
end

#to_cObject



100
101
102
103
104
105
106
107
# File 'lib/cumo/narray/extra.rb', line 100

def to_c
  if size == 1
    Complex(self.extract_cpu)
  else
    # convert to DComplex?
    raise TypeError, "can't convert #{self.class} into Complex"
  end
end

#to_fObject



91
92
93
94
95
96
97
98
# File 'lib/cumo/narray/extra.rb', line 91

def to_f
  if size == 1
    self.extract_cpu.to_f
  else
    # convert to DFloat?
    raise TypeError, "can't convert #{self.class} into Float"
  end
end

#to_iObject



82
83
84
85
86
87
88
89
# File 'lib/cumo/narray/extra.rb', line 82

def to_i
  if size == 1
    self.extract_cpu.to_i
  else
    # convert to Int?
    raise TypeError, "can't convert #{self.class} into Integer"
  end
end

#trace(offset = nil, axis = nil, nan: false) ⇒ Object

Return the sum along diagonals of the array.

If 2-D array, computes the summation along its diagonal with the given offset, i.e., sum of ‘a`. If more than 2-D array, the diagonal is determined from the axes specified by axis argument. The default is axis=.

Parameters:

  • offset (Integer) (defaults to: nil)

    (optional, default=0) diagonal offset

  • axis (Array) (defaults to: nil)

    (optional, default=) diagonal axis

  • nan (Bool) (defaults to: false)

    (optional, default=false) nan-aware algorithm, i.e., if true then it ignores nan.



1075
1076
1077
# File 'lib/cumo/narray/extra.rb', line 1075

def trace(offset=nil, axis=nil, nan:false)
  diagonal(offset, axis).sum(nan:nan, axis:-1)
end

#tril(k = 0) ⇒ Object

Lower triangular matrix. Return a copy with the elements above the k-th diagonal filled with zero.



1003
1004
1005
# File 'lib/cumo/narray/extra.rb', line 1003

def tril(k=0)
  dup.tril!(k)
end

#tril!(k = 0) ⇒ Object

Lower triangular matrix. Fill the self elements above the k-th diagonal with zero.



1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
# File 'lib/cumo/narray/extra.rb', line 1009

def tril!(k=0)
  if ndim < 2
    raise NArray::ShapeError, "must be >= 2-dimensional array"
  end
  if contiguous?
    idx = triu_indices(k + 1)
    *shp, m, n = shape
    reshape!(*shp, m * n)
    self[false, idx] = 0
    reshape!(*shp, m, n)
  else
    store(tril(k))
  end
end

#tril_indices(k = 0) ⇒ Object

Return the indices for the lower-triangle on and below the k-th diagonal.



1025
1026
1027
1028
1029
1030
1031
# File 'lib/cumo/narray/extra.rb', line 1025

def tril_indices(k=0)
  if ndim < 2
    raise NArray::ShapeError, "must be >= 2-dimensional array"
  end
  m, n = shape[-2..-1]
  NArray.tril_indices(m, n, k)
end

#triu(k = 0) ⇒ Object

Upper triangular matrix. Return a copy with the elements below the k-th diagonal filled with zero.



964
965
966
# File 'lib/cumo/narray/extra.rb', line 964

def triu(k=0)
  dup.triu!(k)
end

#triu!(k = 0) ⇒ Object

Upper triangular matrix. Fill the self elements below the k-th diagonal with zero.



970
971
972
973
974
975
976
977
978
979
980
981
982
983
# File 'lib/cumo/narray/extra.rb', line 970

def triu!(k=0)
  if ndim < 2
    raise NArray::ShapeError, "must be >= 2-dimensional array"
  end
  if contiguous?
    *shp, m, n = shape
    idx = tril_indices(k - 1)
    reshape!(*shp, m * n)
    self[false, idx] = 0
    reshape!(*shp, m, n)
  else
    store(triu(k))
  end
end

#triu_indices(k = 0) ⇒ Object

Return the indices for the uppler-triangle on and above the k-th diagonal.



986
987
988
989
990
991
992
# File 'lib/cumo/narray/extra.rb', line 986

def triu_indices(k=0)
  if ndim < 2
    raise NArray::ShapeError, "must be >= 2-dimensional array"
  end
  m, n = shape[-2..-1]
  NArray.triu_indices(m, n, k)
end

#vsplit(indices_or_sections) ⇒ Object

Examples:

p x = Cumo::DFloat.new(4,4).seq
# Cumo::DFloat#shape=[4,4]
# [[0, 1, 2, 3],
#  [4, 5, 6, 7],
#  [8, 9, 10, 11],
#  [12, 13, 14, 15]]

pp x.hsplit(2)
# [Cumo::DFloat(view)#shape=[4,2]
# [[0, 1],
#  [4, 5],
#  [8, 9],
#  [12, 13]],
#  Cumo::DFloat(view)#shape=[4,2]
# [[2, 3],
#  [6, 7],
#  [10, 11],
#  [14, 15]]]

pp x.hsplit([3, 6])
# [Cumo::DFloat(view)#shape=[4,3]
# [[0, 1, 2],
#  [4, 5, 6],
#  [8, 9, 10],
#  [12, 13, 14]],
#  Cumo::DFloat(view)#shape=[4,1]
# [[3],
#  [7],
#  [11],
#  [15]],
#  Cumo::DFloat(view)#shape=[4,0][]]


753
754
755
# File 'lib/cumo/narray/extra.rb', line 753

def vsplit(indices_or_sections)
  split(indices_or_sections, axis:0)
end