Class: Bio::FastaFormat

Inherits:

Object

• Object
• Bio::FastaFormat

Defined in:

lib/crb-blast/crb-blast.rb

Instance Method Summary

• #isNucl? ⇒ Boolean
• #isProt? ⇒ Boolean

Instance Method Details

#isNucl? ⇒ Boolean

Returns:

• (Boolean)

# File 'lib/crb-blast/crb-blast.rb', line 10

def isNucl?
  Bio::Sequence.guess(self.seq, 0.9, 500) == Bio::Sequence::NA
end

#isProt? ⇒ Boolean

Returns:

• (Boolean)

# File 'lib/crb-blast/crb-blast.rb', line 14

def isProt?
  Bio::Sequence.guess(self.seq, 0.9, 500) == Bio::Sequence::AA
end