Class: Bioroebe::GUI::Gtk::WwwFinder

Inherits:
Gtk::Box
  • Object
show all
Includes:
Bioroebe::GUI, Gtk::BaseModule
Defined in:
lib/bioroebe/gui/gtk3/www_finder/www_finder.rb

Overview

Bioroebe::GUI::Gtk::WwwFinder

Constant Summary collapse

NAMESPACE =
#

NAMESPACE

#
inspect
TITLE =
#

TITLE

#
'WWW-Finder'
BASE_URL_FOR_DBGET =
#

BASE_URL_FOR_DBGET

#
'"https://www.genome.ad.jp/dbget-bin/www_bfind_sub?mode=bfind&max_hit=1200&dbkey=kegg&keywords='.dup
BASE_URL_FOR_NCBI =
#

BASE_URL_FOR_NCBI

#
'"https://www.ncbi.nlm.nih.gov/gquery/gquery.fcgi?term='
WIDTH =
#

WIDTH

#
580
HEIGHT =
#

HEIGHT

#
720
USE_THIS_FONT =
#

USE_THIS_FONT

#
:dejavu_condensed_22

Constants included from Bioroebe::GUI

ARRAY_ALL_GTK_WIDGETS, FONT_SIZE, OLD_VERBOSE_VALUE, USE_THIS_FONT_FAMILY_FOR_GUI_APPLICATIONS

Class Method Summary collapse

Instance Method Summary collapse

Methods included from Bioroebe::GUI

#disable_warnings, #enable_warnings, #log_dir?

Constructor Details

#initialize(commandline_arguments = ARGV, run_already = true) ⇒ WwwFinder

#

initialize

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 77

def initialize(
    commandline_arguments = ARGV,
    run_already           = true
  )
  super(:vertical)
  register_sigint
  reset
  set_commandline_arguments(
    commandline_arguments
  )
  run if run_already
end

Class Method Details

.run(i = ARGV) ⇒ Object

#

Bioroebe::GUI::Gtk::WwwFinder.run

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 348

def self.run(
    i = ARGV
  )
  require 'gtk_paradise/run'
  _ = ::Bioroebe::GUI::Gtk::WwwFinder.new(i)
  r = ::Gtk.run
  r << _
  r.add_shortcut(1, 'focus_entry(1)', :alt)
  r.add_shortcut(2, 'focus_entry(2)', :alt)
  r.add_shortcut(3, 'focus_entry(3)', :alt)
  r.add_shortcut(4, 'focus_entry(4)', :alt)
  r.background_colour :white
  r.automatic_size_then_automatic_title
  r.top_left_then_run
end

Instance Method Details

#border_size? ⇒ Boolean

#

border_size?

#

Returns:

  • (Boolean) 


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 124

def border_size?
  0
end

#connect_skeleton ⇒ Object

#

connect_skeleton (connect tag)

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 333

def connect_skeleton
  abort_on_exception
  pack_start(@frame)
end

#create_buttons ⇒ Object

#

create_buttons (button tag, buttons tag)

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 241

def create_buttons
  @button_quit = coloured_quit_button(colour: 'honeydew')
  # ======================================================================= #
  # === @button_search_dbget
  # ======================================================================= #
  @button_search_dbget = coloured_button('_DBGET_ivory')
  @button_search_dbget.signal_connect(:clicked) { |w|
    e rev+'Searching DBGET for: '+sfancy(@entry_dbget.text)
    open_in_browser target_for(:dbget)
  }
  @button_search_dbget.fancy_tooltip = BASE_URL_FOR_DBGET.delete('"')
  # ======================================================================= #
  # === @button_ensembl
  # ======================================================================= #
  @button_ensembl = coloured_button('_Ensembl_lightblue')
  @button_ensembl.signal_connect(:clicked) { |w|
    e rev+'Searching ENSEMBL for: '+sfancy(@entry_ensembl.text)
    open_in_browser target_for(:ensembl)
  }
  # ======================================================================= #
  # === @button_search_ncbi
  # ======================================================================= #
  @button_search_ncbi = coloured_button('_NCBISearch_lightblue')
  @button_search_ncbi.signal_connect(:clicked) { |w|
    e rev+'Searching ncbi for: '+sfancy(@entry_ncbi.text)
    open_in_browser target_for(:ncbi)
  }
  @button_search_ncbi.fancy_tooltip = BASE_URL_FOR_NCBI.delete('"')
  # ======================================================================= #
  # === @button_search_nih
  # ======================================================================= #
  @button_search_nih = coloured_button('_NIHSearch_lightblue')
  @button_search_nih.signal_connect(:clicked) { |w|
    e rev+'Searching NIH for: '+sfancy(@entry_nih.text)
    target = '"https://search2.google.cit.nih.gov/search?'
    target << 'client=NIH_frontend&site=NIH_Master&output=xml_no_dtd&'
    target << 'proxystylesheet=NIH_frontend&ie=UTF-8&oe=UTF-8&filter=0&'
    target << 'as_q='
    tmp = @entry_nih.text.tr(' ','+')
    target << tmp
    target << '&'
    target << 'num=40&btnG.x=29&btnG.y=10&btnG=Search&as_epq=&'
    target << 'as_oq=&as_eq=&lr=&as_occt=any&as_dt=i&as_sitesearch=&sort='
    target << '"'
  }
end

#create_check_boxes ⇒ Object

#

create_check_boxes

Creates the check boxes. On startup, we synchronize this.

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 168

def create_check_boxes
  @checkbox_synchronize = check_button('Synchronize On', false)
  @checkbox_synchronize.set_active(true)
end

#create_entries ⇒ Object

#

create_entries

entries tag.

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 178

def create_entries
  @entry_dbget   = create_entry_with_text_and_max_length('alzheimer')
  # ======================================================================= #
  # ensembl entry
  # ======================================================================= #
  @entry_ensembl = create_entry_with_text_and_max_length('helicobacter')
  # ======================================================================= #
  # ncbi entry
  # ======================================================================= #
  @entry_ncbi    = create_entry_with_text_and_max_length('escherichia coli')
  # ======================================================================= #
  # === @entry_nih
  #
  # nih entry
  # ======================================================================= #
  @entry_nih     = create_entry_with_text_and_max_length('escherichia coli')
  # A helper array containing all our gtk-entries for this application.
  @array_entries = [
    @entry_dbget, @entry_ensembl, @entry_ncbi, @entry_nih
  ]
  @array_entries.each { |entry|
    entry.signal_connect(:changed) { |w, event|
      if @checkbox_synchronize.active?
        @array_entries.each { |entry|
          entry.set_text(entry.text) unless e == entry
        }
      end
    }
    entry.signal_connect(:activate) { |w| puts w }
  }
end

#create_menu ⇒ Object

#

create_menu

This creates the menu.

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 144

def create_menu
  begin
    require 'gtk_paradise/widgets/version_agnostic/my_image_menu_item.rb'
  rescue LoadError => error
    pp error
  end
  @menu_bar = gtk_menu_bar
  @menu_item = gtk_menu_item('Menu')
  @first_submenu = gtk_menu
  @item1 = image_menu_item('foo',nil,0)
  @item1.signal_connect(:activate) { do_something }
  @first_submenu << @item1
  @item2 = image_menu_item('bar',nil,3)
  @item2.signal_connect(:activate) { e 'test 2' }
  @first_submenu << @item2
  @menu_item.set_submenu(@first_submenu)
  @menu_bar.append(@menu_item) 
end

#create_skeleton ⇒ Object

#

create_skeleton (create tag)

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 131

def create_skeleton
  create_menu
  create_check_boxes    
  create_entries
  create_buttons
  create_vbox
end

#create_vbox ⇒ Object

#

create_vbox

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 305

def create_vbox
  @frame = gtk_frame
  @frame.label_widget = modify_bold_label('Search for BioStuff: ','slateblue')
  @v_box.minimal(@menu_bar,2) 
  @v_box.minimal(@entry_dbget,6)
  @v_box.minimal(@button_search_dbget,6)
  @v_box.minimal(@entry_ncbi,6)
  @v_box.minimal(@button_search_ncbi,6)
  @v_box.minimal(@entry_nih,6)
  @v_box.minimal(@button_search_nih,6)
  @v_box.minimal(@entry_ensembl,6)
  @v_box.minimal(@button_ensembl,6)
  @v_box.minimal(@checkbox_synchronize,6)
  # The quit button can be found on the very bottom.
  @v_box.maximal(@button_quit, 6)
  @frame = gtk_frame(@v_box) # And this is the main frame.
end

#favicon? ⇒ Boolean

#

favicon?

#

Returns:

  • (Boolean) 


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 326

def favicon?
  :tabble
end

#focus_entry(which_entry) ⇒ Object

#

focus_entry

This helps you to focus an entry.

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 293

def focus_entry(which_entry)
  case which_entry.to_s
  when '1' then @entry_dbget.do_focus
  when '2' then @entry_ncbi.do_focus
  when '3' then @entry_nih.do_focus
  when '4' then @entry_ensembl.do_focus
  end
end

#padding? ⇒ Boolean

#

padding?

#

Returns:

  • (Boolean) 


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 117

def padding?
  4
end

#reset ⇒ Object

#

reset (reset tag)

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 93

def reset
  reset_the_internal_variables
  # ======================================================================= #
  # === @configuration
  # ======================================================================= #
  @configuration = [true, __dir__, NAMESPACE]
  title_width_height_font(TITLE, WIDTH, HEIGHT, USE_THIS_FONT)
  use_gtk_paradise_project_css_file
  append_project_css_file 
  infer_the_size_automatically
  # ======================================================================= #
  # === @button_quit
  # ======================================================================= #
  @button_quit = ''
  # ======================================================================= #
  # === @v_box
  # ======================================================================= #
  @v_box = gtk_vbox
  background_colour :slateblue
end

#run ⇒ Object

#

run (run tag)

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 341

def run
  create_skeleton_then_connect_skeleton
end

#target_for(i) ⇒ Object

#

target_for

#


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# File 'lib/bioroebe/gui/gtk3/www_finder/www_finder.rb', line 213

def target_for(i)
  _ = ''.dup
  case i # case tag
  # ======================================================================= #
  # === :ensembl
  # ======================================================================= #
  when :ensembl
    _ << '"https://www.ensembl.org/Human/Search/Results?q='
    _ << @entry_ensembl.text+';name=Search;facet_species=Human"'
  # ======================================================================= #
  # === :dbget
  # ======================================================================= #
  when :dbget
    _ << BASE_URL_FOR_DBGET
    _ << @entry_dbget.text+'"'
  # ======================================================================= #
  # === :ncbi
  # ======================================================================= #
  when :ncbi
    _ << BASE_URL_FOR_NCBI
    _ << @entry_ncbi.text+'"'
  end
  return _
end