Method: Bio::Alignment::Output#output_phylip

Defined in:
lib/bio/alignment.rb

#output_phylip(options = {}) ⇒ Object

generates phylip interleaved alignment format as a string



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# File 'lib/bio/alignment.rb', line 1082

def output_phylip(options = {})
  aln, aseqs, lines = __output_phylip_common(options)
  lines.times do
    aseqs.each { |a| aln << a.shift }
    aln << "\n"
  end
  aln.pop if aln[-1] == "\n"
  aln.join('')
end