Class: Bio::FlatFileIndex::Indexer::Parser::GenPeptParser

Inherits:

GenBankParser

• Object
• TemplateParser
• GenBankParser
• Bio::FlatFileIndex::Indexer::Parser::GenPeptParser

Defined in:

lib/bio/io/flatfile/indexer.rb

Overview

class GenBankParser

Constant Summary

Constants inherited from GenBankParser

Bio::FlatFileIndex::Indexer::Parser::GenBankParser::NAMESTYLE, Bio::FlatFileIndex::Indexer::Parser::GenBankParser::PRIMARY

Constants inherited from TemplateParser

TemplateParser::NAMESTYLE

Instance Attribute Summary

Attributes inherited from TemplateParser

#dbclass, #errorlog, #fileid, #format, #primary, #secondary

Instance Method Summary

• #initialize(*arg) ⇒ GenPeptParser constructor

  A new instance of GenPeptParser.

Methods inherited from TemplateParser

#add_secondary_namespaces, #close_flatfile, #each, #open_flatfile, #parse_primary, #parse_secondary, #set_primary_namespace

Constructor Details

#initialize(*arg) ⇒ GenPeptParser

Returns a new instance of GenPeptParser.

# File 'lib/bio/io/flatfile/indexer.rb', line 199

def initialize(*arg)
  super(*arg)
  self.dbclass = Bio::GenPept
end