Module: PubliSci::ORM

Defined in:
lib/bio-publisci/datacube_model.rb,
lib/bio-publisci/dataset/ORM/observation.rb,
lib/bio-publisci/dataset/ORM/data_cube_orm.rb

Defined Under Namespace

Classes: Component, DataCube, DataSet, DataStructureDefinition, Dimension, Measure, Observation

Instance Method Summary collapse

Instance Method Details

#load_repo(repo) ⇒ Object 



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# File 'lib/bio-publisci/datacube_model.rb', line 49

def load_repo(repo)
  raise "Not an RDF::Repository - #{repo}" unless repo.is_a? RDF::Repository
  Spira.add_repository :default, repo
end

#observation ⇒ Object 



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# File 'lib/bio-publisci/datacube_model.rb', line 54

def observation
  unless PubliSci::ORM.const_defined?("Observation")
    obs = Class.new(Spira::Base) do
      type RDF::URI.new('http://purl.org/linked-data/cube#Observation')

      property :structure, predicate: QB.dataSet

      ((Dimension.each.to_a | Measure.each.to_a) || []).each{|component|
        property strip_uri(component.subject.to_s), predicate: component.subject
      }
    end
    PubliSci::ORM.const_set("Observation",obs)
  end
  Observation
end

#reload_observation ⇒ Object 



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# File 'lib/bio-publisci/datacube_model.rb', line 70

def reload_observation
  PubliSci::ORM.send(:remove_const, "Observation")
  observation
end

#strip_uri(uri) ⇒ Object 



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# File 'lib/bio-publisci/datacube_model.rb', line 75

def strip_uri(uri)
  uri = uri.to_s.dup
  uri[-1] = '' if uri[-1] == '>'
  uri.to_s.split('/').last.split('#').last
end