Class: Bio::HMMER::HMMER3::DefaultHMMSearchReport::Hit

Inherits:
Object
  • Object
show all
Defined in:
lib/bio/appl/hmmer/hmmer3/default_report.rb

Overview

TODO: There is some overlapping code here between the tabular report Hit object and this object, probably should DRY it up a bit.

Defined Under Namespace

Classes: Hsp

Instance Attribute Summary collapse

Instance Method Summary collapse

Instance Attribute Details

#hsps ⇒ Object

Returns the value of attribute hsps.



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# File 'lib/bio/appl/hmmer/hmmer3/default_report.rb', line 208

def hsps
  @hsps
end

#sequence_name ⇒ Object

Returns the value of attribute sequence_name.



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# File 'lib/bio/appl/hmmer/hmmer3/default_report.rb', line 206

def sequence_name
  @sequence_name
end

Instance Method Details

#initialise ⇒ Object 



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# File 'lib/bio/appl/hmmer/hmmer3/default_report.rb', line 210

def initialise
  @hsps = []
end