Class: BEL::BELRDF::ParameterConverter
- Inherits:
-
Object
- Object
- BEL::BELRDF::ParameterConverter
- Includes:
- RDFConverter
- Defined in:
- lib/bel/translator/plugins/rdf2/parameter_converter.rb
Constant Summary collapse
- ENCODING_HASH =
{ :A => BELV2_0.AbundanceConcept, :B => BELV2_0.BiologicalProcessConcept, :C => BELV2_0.ComplexConcept, :E => BELV2_0.ProteinModificationConcept, :G => BELV2_0.GeneConcept, :L => BELV2_0.LocationConcept, :M => BELV2_0.MicroRNAConcept, :O => BELV2_0.PathologyConcept, :P => BELV2_0.ProteinConcept, :R => BELV2_0.RNAConcept, :T => BELV2_0.MolecularActivityConcept }.freeze
Instance Method Summary collapse
-
#convert(parameter) ⇒ RDF::Graph
Convert a BELParser::Expression::Model::Parameter to RDF::Graph of RDF statements.
-
#initialize(namespace_converter) ⇒ ParameterConverter
constructor
A new instance of ParameterConverter.
Methods included from RDFConverter
Constructor Details
#initialize(namespace_converter) ⇒ ParameterConverter
Returns a new instance of ParameterConverter.
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# File 'lib/bel/translator/plugins/rdf2/parameter_converter.rb', line 10 def initialize(namespace_converter) @namespace_converter = namespace_converter end |
Instance Method Details
#convert(parameter) ⇒ RDF::Graph
Convert a BELParser::Expression::Model::Parameter to RDF::Graph of RDF statements.
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# File 'lib/bel/translator/plugins/rdf2/parameter_converter.rb', line 18 def convert(parameter) namespace_vocab = @namespace_converter.convert(parameter.namespace) return nil unless namespace_vocab value_s = parameter.value.to_s param_uri = namespace_vocab[value_s] pg = RDF::Graph.new if parameter.encoding parameter.encoding.each do |enc| concept_type = ENCODING_HASH[enc] next unless concept_type pg << s(param_uri, RDF.type, concept_type) end end [param_uri, pg] end |