Class: RdfContext::SQLite3Store

Inherits:
AbstractSQLStore show all
Defined in:
lib/rdf_context/store/sqlite3_store.rb

Overview

SQLite3 store context-ware and formula-aware implementation. It stores it’s triples in the following partitions:

  • Asserted non rdf:type statements

  • Asserted rdf:type statements (in a table which models Class membership). The motivation for this partition is primarily query speed and scalability as most graphs will always have more rdf:type statements than others

  • All Quoted statements

In addition it persists namespace mappings in a seperate table

Based on Python RdfLib SQLite

Constant Summary collapse

CREATE_ASSERTED_STATEMENTS_TABLE = 
%(
    CREATE TABLE %s_asserted_statements (
subject       text not NULL,
predicate     text not NULL,
object        text not NULL,
context       text not NULL,
termComb      tinyint unsigned not NULL))
CREATE_ASSERTED_TYPE_STATEMENTS_TABLE = 
%(
    CREATE TABLE %s_type_statements (
member        text not NULL,
klass         text not NULL,
context       text not NULL,
termComb      tinyint unsigned not NULL))
CREATE_LITERAL_STATEMENTS_TABLE = 
%(
    CREATE TABLE %s_literal_statements (
subject       text not NULL,
predicate     text not NULL,
object        text,
context       text not NULL,
termComb      tinyint unsigned not NULL,
objLanguage   varchar(3),
objDatatype   text))
CREATE_QUOTED_STATEMENTS_TABLE = 
%(
    CREATE TABLE %s_quoted_statements (
subject       text not NULL,
predicate     text not NULL,
object        text,
context       text not NULL,
termComb      tinyint unsigned not NULL,
objLanguage   varchar(3),
objDatatype   text))
CREATE_NS_BINDS_TABLE = 
%(
    CREATE TABLE %s_namespace_binds (
prefix        varchar(20) UNIQUE not NULL,
uri           text,
PRIMARY KEY (prefix)))
DROP_ASSERTED_STATEMENTS_TABLE = 
%(DROP TABLE %s_asserted_statements)
DROP_ASSERTED_TYPE_STATEMENTS_TABLE = 
%(DROP TABLE %s_type_statements)
DROP_LITERAL_STATEMENTS_TABLE = 
%(DROP TABLE %s_literal_statements)
DROP_QUOTED_STATEMENTS_TABLE = 
%(DROP TABLE %s_quoted_statements)
DROP_NS_BINDS_TABLE = 
%(DROP TABLE %s_namespace_binds)

Constants inherited from AbstractSQLStore

AbstractSQLStore::ASSERTED_LITERAL_PARTITION, AbstractSQLStore::ASSERTED_NON_TYPE_PARTITION, AbstractSQLStore::ASSERTED_TYPE_PARTITION, AbstractSQLStore::CONTEXT_SELECT, AbstractSQLStore::COUNT_SELECT, AbstractSQLStore::FULL_TRIPLE_PARTITIONS, AbstractSQLStore::INTERNED_PREFIX, AbstractSQLStore::QUOTED_PARTITION, AbstractSQLStore::STRONGLY_TYPED_TERMS, AbstractSQLStore::TRIPLE_SELECT, AbstractSQLStore::TRIPLE_SELECT_NO_ORDER

Constants included from TermUtils

TermUtils::CONTEXT, TermUtils::GRAPH_TERM_DICT, TermUtils::OBJECT, TermUtils::PREDICATE, TermUtils::REVERSE_TERM_COMBINATIONS, TermUtils::SUBJECT, TermUtils::TERM_COMBINATIONS, TermUtils::TERM_INSTANTIATION_DICT

Instance Attribute Summary

Attributes inherited from AbstractStore

#identifier, #nsbinding, #uri_binding

Instance Method Summary collapse

Methods inherited from AbstractSQLStore

#_normalizeSQLCmd, #add, #asserted_table, #asserted_type_table, #bind, #buildClause, #buildLitDTypeClause, #buildLitLanguageClause, #buildLiteralTripleSQLCommand, #buildTripleSQLCommand, #buildTypeSQLCommand, #close, #commit, #contains?, #context_aware?, #contexts, #createTerm, #destroy, #extractTriple, #formula_aware?, #literal_table, #namespace, #namespace_binds, #normalizeTerm, #nsbinding, #prefix, #queryAnalysis, #quoted_table, #remove, #remove_context, #rollback, #size, #transaction_aware?, #triples, #unionSELECT, #uri_binding

Methods included from TermUtils

#constructGraph, #normalizeGraph, #statement2TermCombination, #term2Letter, #type2TermCombination

Methods inherited from AbstractStore

#add, #bind, #bnodes, #close, #commit, #contains?, #context_aware?, #contexts, #destroy, #formula_aware?, #inspect, #item, #namespace, #objects, #predicates, #prefix, #remove, #rollback, #size, #subjects, #transaction_aware?, #triples

Constructor Details

#initialize(identifier = nil, configuration = {}) ⇒ SQLite3Store

Create a new SQLite3Store Store @param configuration Specific to type of storage

Parameters:

  • identifier (URIRef) (defaults to: nil)
  • configuration (Hash) (defaults to: {}) —

    a customizable set of options

Options Hash (configuration):

  • :db (String) —

    Path to database file

  • :connection (String) —

    ActiveRecord::Base.connection.raw_connection



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 22

def initialize(identifier = nil, configuration = {})
  @path = configuration[:path] ||= File.join(Dir.getwd, "#{@internedId}.db")

  super(identifier, configuration)

  @autocommit_default = false
end

Instance Method Details

#buildContextClause(context, tableName) ⇒ Object (protected)

Where clase utility functions



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 181

def buildContextClause(context, tableName)
  context = normalizeTerm(context) if context

  #    case context
  #    when REGEXTerm
  #    when Array
  #    else
    ["#{tableName}.context=?", context] if context
  #    end
end

#buildObjClause(object, tableName) ⇒ Object (protected)

Where clase utility functions



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 169

def buildObjClause(object, tableName)
  case object
  #    when REGEXTerm
  #    when Array
when Graph
  ["#{tableName}.object=?", self.normalizeTerm(object.identifier)]
  else
    ["#{tableName}.object=?", object] if object
  end
end

#buildPredClause(predicate, tableName) ⇒ Object (protected) 



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 159

def buildPredClause(predicate, tableName)
  #    case predicate
  #    when REGEXTerm
  #    when Array
  #    else
    ["#{tableName}.predicate=?", predicate] if predicate
  #    end
end

#buildSubjClause(subject, tableName) ⇒ Object (protected)

Where clase utility functions



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 148

def buildSubjClause(subject, tableName)
  case subject
  #    when REGEXTerm
  #    when Array
  when Graph
     ["#{tableName}.subject=?", self.normalizeTerm(subject.identifier)]
  else
    ["#{tableName}.subject=?", subject] if subject
  end
end

#buildTypeClassClause(object, tableName) ⇒ Object (protected)

Where clase utility functions



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 203

def buildTypeClassClause(object, tableName)
  #    case context
  #    when REGEXTerm
  #    else
    ["#{tableName}.klass=?", object] if object
  #    end
end

#buildTypeMemberClause(subject, tableName) ⇒ Object (protected)

Where clase utility functions



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 193

def buildTypeMemberClause(subject, tableName)
  #    case context
  #    when REGEXTerm
  #    when Array
  #    else
    ["#{tableName}.member=?", subject] if subject
  #    end
end

#executeSQL(qStr, *params, &block) ⇒ Object (protected)

This takes the query string and parameters and (depending on the SQL implementation) either fill in the parameter in-place or pass it on to the DB impl (if it supports this). The default (here) is to fill the parameters in-place surrounding each param with quote characters

Yields each row



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 216

def executeSQL(qStr, *params, &block)
  @statement_cache ||= {}
  #@statement_cache[qStr] ||= @db.prepare(qStr)
  @statement_cache[qStr] ||= qStr

  puts "executeSQL: '#{qStr}', '#{params.join("', '")}'" if ::RdfContext::debug?
  if block_given?
    @db.execute(@statement_cache[qStr], *params) do |row|
      puts "executeSQL res: #{row.inspect}" if ::RdfContext::debug?
      row = row.keys.select{|k| k.is_a?(Integer)}.sort.map{|k| row[k]} if row.is_a?(Hash)
      yield(row)
    end
  else
    puts "executeSQL no block given" if ::RdfContext::debug?
    @db.execute(@statement_cache[qStr], *params)
  end
rescue SQLite3::SQLException => e
  puts "SQL Exception (ignored): #{e.message}" if ::RdfContext::debug?
end

#open(options) ⇒ Object

Opens the store specified by the configuration hash. If create is True a store will be created if it does not already exist. If create is False and a store does not already exist an exception is raised. An exception is also raised if a store exists, but there is insufficient permissions to open the store.

Parameters:

  • options[String] (Hash) —

    a customizable set of options

Raises:



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 38

def open(options)
  @db ||= options[:connection]
  return @db if @db

  if options[:path] && !File.exist?(options[:path])
    @db = SQLite3::Database.new(options[:path])
    setup
  end

  raise StoreException.new("Attempt to open missing database file #{options[:path]}") unless File.exist?(options[:path])
  @db = SQLite3::Database.new(options[:path])
end

#setup ⇒ Object

Create necessary tables and indecies for this database



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 52

def setup
  executeSQL(CREATE_ASSERTED_STATEMENTS_TABLE % @internedId)
  executeSQL(CREATE_ASSERTED_TYPE_STATEMENTS_TABLE % @internedId)
  executeSQL(CREATE_QUOTED_STATEMENTS_TABLE % @internedId)
  executeSQL(CREATE_NS_BINDS_TABLE % @internedId)
  executeSQL(CREATE_LITERAL_STATEMENTS_TABLE % @internedId)
  
  # Create indicies
  {
    asserted_table => {
      "#{@internedId}_A_termComb_index" => %w(termComb),
      "#{@internedId}_A_s_index" => %w(subject),
      "#{@internedId}_A_p_index" => %w(predicate),
      "#{@internedId}_A_o_index" => %w(object),
      "#{@internedId}_A_c_index" => %w(context),
    },
    asserted_type_table => {
      "#{@internedId}_T_termComb_index" => %w(termComb),
      "#{@internedId}_T_member_index" => %w(member),
      "#{@internedId}_T_klass_index" => %w(klass),
      "#{@internedId}_T_c_index" => %w(context),
    },
    literal_table => {
      "#{@internedId}_L_termComb_index" => %w(termComb),
      "#{@internedId}_L_s_index" => %w(subject),
      "#{@internedId}_L_p_index" => %w(predicate),
      "#{@internedId}_L_c_index" => %w(context),
    },
    quoted_table => {
      "#{@internedId}_Q_termComb_index" => %w(termComb),
      "#{@internedId}_Q_s_index" => %w(subject),
      "#{@internedId}_Q_p_index" => %w(predicate),
      "#{@internedId}_Q_o_index" => %w(object),
      "#{@internedId}_Q_c_index" => %w(context),
    },
    namespace_binds => {
      "#{@internedId}_uri_index" => %w(uri),
    }
  }.each_pair do |tablename, indicies|
    indicies.each_pair do |index, columns|
      executeSQL("CREATE INDEX #{index} on #{tablename} ('#{columns.join(', ')}')")
    end
  end
end

#teardown ⇒ Object

Teardown DB files



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# File 'lib/rdf_context/store/sqlite3_store.rb', line 98

def teardown
  # Drop indicies
  {
    asserted_table => {
      "#{@internedId}_A_termComb_index" => %w(termComb),
      "#{@internedId}_A_s_index" => %w(subject),
      "#{@internedId}_A_p_index" => %w(predicate),
      "#{@internedId}_A_o_index" => %w(object),
      "#{@internedId}_A_c_index" => %w(context),
    },
    asserted_type_table => {
      "#{@internedId}_T_termComb_index" => %w(termComb),
      "#{@internedId}_T_member_index" => %w(member),
      "#{@internedId}_T_klass_index" => %w(klass),
      "#{@internedId}_T_c_index" => %w(context),
    },
    literal_table => {
      "#{@internedId}_L_termComb_index" => %w(termComb),
      "#{@internedId}_L_s_index" => %w(subject),
      "#{@internedId}_L_p_index" => %w(predicate),
      "#{@internedId}_L_c_index" => %w(context),
    },
    quoted_table => {
      "#{@internedId}_Q_termComb_index" => %w(termComb),
      "#{@internedId}_Q_s_index" => %w(subject),
      "#{@internedId}_Q_p_index" => %w(predicate),
      "#{@internedId}_Q_o_index" => %w(object),
      "#{@internedId}_Q_c_index" => %w(context),
    },
    namespace_binds => {
      "#{@internedId}_uri_index" => %w(uri),
    }
  }.each_pair do |tablename, indicies|
    tn = "#{@internedId}_#{tablename}"
    indicies.each_pair do |index, columns|
      executeSQL("DROP INDEX #{index} ON #{tn}")
    end
  end
  
  # Drop tables
  executeSQL("DROP TABLE #{namespace_binds}")
  executeSQL("DROP TABLE #{quoted_table}")
  executeSQL("DROP TABLE #{literal_table}")
  executeSQL("DROP TABLE #{asserted_type_table}")
  executeSQL("DROP TABLE #{asserted_table}")
end