Class: Bio::GFF::GFF3::Record

Inherits:

Object

• Object
• Bio::GFF::GFF3::Record

Defined in:

lib/protk/bio_gff3_extensions.rb

Overview

Extension to GFF3 records to support genomic coordinate mapping tasks

Instance Method Summary

• #<=>(otherRecord) ⇒ Object

  Function to return our coordinates relative to some other coordinate system (eg a protein).

• #length ⇒ Object

Instance Method Details

#<=>(otherRecord) ⇒ Object

Function to return our coordinates relative to some other coordinate system (eg a protein)

# File 'lib/protk/bio_gff3_extensions.rb', line 14

def <=>(otherRecord)
	self.start <=> otherRecord.start
end

#length ⇒ Object

# File 'lib/protk/bio_gff3_extensions.rb', line 18

def length
	return self.end-self.start+1
end