Class: MiGA::Cli::Action::New

Inherits:
MiGA::Cli::Action show all
Defined in:
lib/miga/cli/action/new.rb

Constant Summary

Constants included from MiGA

MiGA::CITATION, VERSION, VERSION_DATE, VERSION_NAME

Instance Attribute Summary

Attributes inherited from MiGA::Cli::Action

#cli

Instance Method Summary collapse

Methods inherited from MiGA::Cli::Action

#complete, #empty_action, #initialize, #launch, load, #name

Methods inherited from MiGA

CITATION, DEBUG, DEBUG_OFF, DEBUG_ON, DEBUG_TRACE_OFF, DEBUG_TRACE_ON, FULL_VERSION, LONG_VERSION, VERSION, VERSION_DATE, initialized?, #result_files_exist?

Methods included from MiGA::Common::Path

#root_path, #script_path

Methods included from MiGA::Common::Format

#clean_fasta_file, #seqs_length, #tabulate

Constructor Details

This class inherits a constructor from MiGA::Cli::Action

Instance Method Details

#parse_cli ⇒ Object 



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# File 'lib/miga/cli/action/new.rb', line 8

def parse_cli
  cli.parse do |opt|
    cli.opt_object(opt, [:project, :project_type_req])
    opt.on(
      '-n', '--name STRING',
      'Name of the project'
      ){ |v| cli[:name] = v }
    opt.on(
      '-d', '--description STRING',
      'Description of the project'
      ){ |v| cli[:description] = v }
    opt.on(
      '-c', '--comments STRING',
      'Comments on the project'
      ){ |v| cli[:comments] = v }
    opt.on(
      '-m', '--metadata STRING',
      'Metadata as key-value pairs separated by = and delimited by comma',
      'Values are saved as strings except for booleans (true / false) or nil'
      ){ |v| cli[:metadata] = v }
  end
end

#perform ⇒ Object 



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# File 'lib/miga/cli/action/new.rb', line 31

def perform
  cli.ensure_type(MiGA::Project)
  cli.ensure_par(project: '-P')
  unless File.exist? "#{ENV["HOME"]}/.miga_rc" and
        File.exist? "#{ENV["HOME"]}/.miga_daemon.json"
    raise "You must initialize MiGA before creating the first project.\n" +
      'Please use "miga init".'
  end
  cli.say "Creating project: #{cli[:project]}"
  raise 'Project already exists, aborting.' if Project.exist? cli[:project]
  p = Project.new(cli[:project], false)
  p = cli.add_metadata(p)
  p.save
end