Module: CodeRunner::Hopper
- Includes:
- Moab
- Defined in:
- lib/coderunner/system_modules/hopper.rb
Instance Method Summary collapse
Methods included from Moab
#batch_script_file, #cancel_job, #error_file, #execute, #get_run_status, #hours_minutes_seconds, #mpi_prog, #nodes, #nprocstot, #output_file, #ppn, #ppn_checks, #queue_status, #run_command
Methods included from Launcher
#cancel_job_launcher, #error_file_launcher, #execute_launcher, #launcher_prefix, #output_file_launcher, #queue_status_launcher, #use_launcher
Instance Method Details
#batch_script ⇒ Object
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# File 'lib/coderunner/system_modules/hopper.rb', line 9 def batch_script nodes, ppn = @nprocs.split(/x/) eputs "Warning: Underuse of nodes (#{ppn} cores per node instead of #{max_ppn})" if ppn.to_i < max_ppn raise "Please specify project" unless @project raise "Error: cores per node cannot excede #{max_ppn}" if ppn.to_i > max_ppn # raise "Error: project (i.e. budget) not specified" unless @project ppn ||= max_ppn if @wall_mins ep @wall_mins hours = (@wall_mins / 60).floor mins = @wall_mins.to_i % 60 secs = ((@wall_mins - @wall_mins.to_i) * 60).to_i end eputs "Allotted wall time is " + sprintf("%02d:%02d:%02d", hours, mins, secs) nprocstot = nodes.to_i * ppn.to_i <<EOF #!/bin/bash --login #PBS -N #{executable_name}.#{job_identifier} #PBS -l mppwidth=#{nprocstot} #PBS -l mppnppn=#{ppn} #{@wall_mins ? "#PBS -l walltime=#{sprintf("%02d:%02d:%02d", hours, mins, secs)}" : ""} #{@project ? "#PBS -A #@project" : ""} #PBS -q #{@runner.debug ? "debug" : "regular"} ### start of jobscript cd $PBS_O_WORKDIR echo "workdir: $PBS_O_WORKDIR" echo "Submitting #{nodes}x#{ppn} job on Hopper for project #@project..." EOF end |
#max_ppn ⇒ Object
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# File 'lib/coderunner/system_modules/hopper.rb', line 6 def max_ppn 24 end |