Module: CodeRunner::Dirac

Includes:
Moab
Defined in:
lib/coderunner/system_modules/dirac.rb

Instance Method Summary collapse

Methods included from Moab

#batch_script_file, #cancel_job, #error_file, #execute, #get_run_status, #hours_minutes_seconds, #nodes, #nprocstot, #output_file, #ppn, #ppn_checks, #queue_status, #run_command

Instance Method Details

#batch_scriptObject



15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
# File 'lib/coderunner/system_modules/dirac.rb', line 15

def batch_script
	ppn_checks
	hours, minutes, seconds = hours_minutes_seconds
	<<EOF
#!/bin/bash --login 
#PBS -N #{executable_name}.#{job_identifier}
#PBS -l nodes=#{nodes}:ppn=#{ppn}:#{gpu_name}
#PBS -l walltime=#{sprintf("%02d:%02d:%02d", hours, mins, secs)}
#{@project ? "#PBS -A #@project" : ""}
#PBS -e #{executable_name}.#{job_identifier}.e$PBS_JOBID
#PBS -o #{executable_name}.#{job_identifier}.o$PBS_JOBID
#PBS -V
#PBS -q dirac_reg


### start of jobscript 
cd $PBS_O_WORKDIR 
echo "workdir: $PBS_O_WORKDIR" 
	#{code_run_environment}

echo "Submitting #{nodes}x#{ppn}:#{gpu_name} job on #{CodeRunner::SYS} for project #@project..."
EOF
end

#gpu_nameObject



11
12
13
# File 'lib/coderunner/system_modules/dirac.rb', line 11

def gpu_name
	@nprocs.split(/:/)[1]
end

#max_ppnObject



5
6
7
# File 'lib/coderunner/system_modules/dirac.rb', line 5

def max_ppn
	16
end

#mpi_progObject



8
9
10
# File 'lib/coderunner/system_modules/dirac.rb', line 8

def mpi_prog
	"mpiexec -np #{nprocstot} "
end