Class: Bio::RestrictionEnzyme::DoubleStranded::CutLocations

Inherits:

Array

• Object
• Array
• Bio::RestrictionEnzyme::DoubleStranded::CutLocations

Defined in:

lib/bio/util/restriction_enzyme/double_stranded/cut_locations.rb

Overview

Contains an Array of CutLocationPair objects.

Direct Known Subclasses

CutLocationsInEnzymeNotation

Instance Method Summary

• #complement ⇒ Object

  Returns an Array of locations of cuts on the complementary strand.

• #initialize(*args) ⇒ CutLocations constructor

  CutLocations constructor.

• #primary ⇒ Object

  Returns an Array of locations of cuts on the primary strand.

Constructor Details

#initialize(*args) ⇒ CutLocations

CutLocations constructor.

Contains an Array of CutLocationPair objects.

Example:

clp1 = CutLocationPair.new(3,2)
clp2 = CutLocationPair.new(7,9)
pairs = CutLocations.new(clp1, clp2)

---

Arguments

• args: Any number of CutLocationPair objects

Returns

nothing

# File 'lib/bio/util/restriction_enzyme/double_stranded/cut_locations.rb', line 26

def initialize(*args)
  validate_args(args)
  super(args)
end

Instance Method Details

#complement ⇒ Object

Returns an Array of locations of cuts on the complementary strand

---

Arguments

• none

Returns

Array of locations of cuts on the complementary strand

# File 'lib/bio/util/restriction_enzyme/double_stranded/cut_locations.rb', line 47

def complement
  self.collect {|a| a[1]}
end

#primary ⇒ Object

Returns an Array of locations of cuts on the primary strand

---

Arguments

• none

Returns

Array of locations of cuts on the primary strand

# File 'lib/bio/util/restriction_enzyme/double_stranded/cut_locations.rb', line 37

def primary
  self.collect {|a| a[0]}
end