Class: Bio::Tree

Inherits:

Object

• Object
• Bio::Tree

Defined in:

lib/bio-alignment/tree.rb

Overview

Here we add to BioRuby’s Bio::Tree classes

Defined Under Namespace

Classes: Node

Instance Method Summary

• #find(name) ⇒ Object
• #map ⇒ Object

  Walk the ordered tree leaves, calling into the block, and return an array.

Instance Method Details

#find(name) ⇒ Object

# File 'lib/bio-alignment/tree.rb', line 62

def find name
  get_node_by_name(name)
end

#map ⇒ Object

Walk the ordered tree leaves, calling into the block, and return an array

# File 'lib/bio-alignment/tree.rb', line 67

def map 
  res = []
  leaves.each do | leaf |
    item = yield leaf
    res << item
  end
  res
end