Module: ViralSeq

Defined in:
lib/viral_seq.rb,
lib/viral_seq/pid.rb,
lib/viral_seq/math.rb,
lib/viral_seq/hivdr.rb,
lib/viral_seq/muscle.rb,
lib/viral_seq/ref_seq.rb,
lib/viral_seq/version.rb,
lib/viral_seq/constant.rb,
lib/viral_seq/seq_hash.rb,
lib/viral_seq/sequence.rb,
lib/viral_seq/tcs_core.rb,
lib/viral_seq/tcs_json.rb,
lib/viral_seq/rubystats.rb,
lib/viral_seq/seq_hash_pair.rb

Overview

lib/version.rb version info and histroy

Defined Under Namespace

Modules: Math, Muscle, PID, RefSeq, Rubystats Classes: SeqHash, SeqHashPair, Sequence, TcsCore, TcsJson

Constant Summary collapse

VERSION =
"1.0.10"
TCS_VERSION =
"2.1.0"
AMINO_ACID_LIST =

array for all amino acid one letter abbreviations

["A", "C", "D", "E", "F", "G", "H", "I", "K", "L", "M", "N", "P", "Q", "R", "S", "T", "V", "W", "Y", "*"]