Module: TestWF

Extended by:
Workflow
Defined in:
lib/rbbt/workflow/schedule.rb

Constant Summary

Constants included from Workflow

Workflow::DEBUG_JOB_HASH, Workflow::DEFAULT_NAME, Workflow::FORGET_DEP_TASKS, Workflow::LOAD_STEP_CACHE, Workflow::STEP_CACHE, Workflow::TAG

Instance Attribute Summary

Attributes included from Workflow

#asynchronous_exports, #description, #documentation, #example_dir, #exec_exports, #helpers, #last_task, #libdir, #load_step_cache, #remote_tasks, #step_cache, #stream_exports, #synchronous_exports, #task_dependencies, #task_description, #tasks, #workdir

Method Summary

Methods included from Workflow

SOPT_str, __job, __load_step, _job, _load_step, add_remote_tasks, all_exports, assign_dep_inputs, dep, dep_task, desc, doc, doc_parse_chunks, doc_parse_first_line, doc_parse_up_to, documentation_markdown, example, example_inputs, example_step, examples, export_asynchronous, export_exec, export_stream, export_synchronous, extended, extension, fast_load_id, fast_load_step, get_SOPT, get_SOPT, get_job_step, helper, id_for, import, import_task, init_remote_tasks, installed_workflows, job, jobs, load_documentation, load_id, load_inputs, load_name, load_remote_tasks, load_step, load_step, load_step_cache, load_workflow_file, load_workflow_libdir, local_persist_setup, local_workdir_setup, local_workflow_filename, log, make_local, nextflow, nextflow_dir, nextflow_file, override_dependencies, parse_workflow_doc, process_remote_tasks, real_dependencies, rec_dependencies, rec_input_defaults, rec_input_descriptions, rec_input_options, rec_input_types, rec_input_use, rec_inputs, relocate, relocate_array, relocate_dependency, require_local_workflow, require_remote_workflow, require_workflow, resolve_locals, returns, set_step_dependencies, setup_override_dependency, step_module, step_path, task, task_exports, task_for, task_from_dep, task_info, transplant, unexport, with_workdir, workdir, workdir=, workflow_for

Methods included from InputModule

#input