Documentation for ms-sequest (0.0.17)

Alphabetic Index

File Listing

README

Namespace Listing A-Z

A

AAModification (Sequest::PepXML)

B

Bioworks

D

DTA (Ms::Sequest::Srf)
DTAGen (Ms::Sequest::Srf)

H

Header (Ms::Sequest::Srf)
Header (Ms::Sequest::Sqt)

L

Locus (Ms::Sequest::Sqt)

M

MSMSPipelineAnalysis (Sequest::PepXML)
MSMSRunSummary (Sequest::PepXML)
Match (Ms::Sequest::Sqt)
ModificationInfo (Sequest::PepXML::SearchHit)
Modifications (Sequest::PepXML)
Ms

N

NoSequestParamsError (Ms::Sequest::Srf)
Numeric

O

Out (Ms::Sequest::Srf)

P

Parameters (Sequest::PepXML)
Params (Ms::Sequest)
Pep (Ms::Sequest::Srf::Out)
Pep (SpecID)
Pep (Bioworks)
PepXML (Sequest)
Percolator (Ms::Sequest::Sqt::Match)
Prot (Bioworks)
Prot (SpecID)
Prot (Ms::Sequest::Srf::Out)
ProteinReferenceable

S

Search (Ms::Sequest::Srf)
SearchDatabase (Sequest::PepXML)
SearchHit (Sequest::PepXML)
SearchResult (Sequest::PepXML)
SearchSummary (Sequest::PepXML)
Sequest (Ms)
Sequest
SpecID
SpecIDXML
Spectrum (Ms::Sequest::Sqt)
SpectrumQuery (Sequest::PepXML)
Sqt (Ms::Sequest)
Sqt (Ms::Sequest::Srf)
SqtGroup (Ms::Sequest)
Srf (Ms::Sequest)
SrfGroup (Ms::Sequest)

T

TerminalModification (Sequest::PepXML)

X

XML (Bioworks)
XMLParser (Bioworks)