Method: Bio::GCG::Seq#seq

Defined in:
lib/bio/appl/gcg/seq.rb

#seq ⇒ Object

Sequence data. The class of the sequence is Bio::Sequence::NA, Bio::Sequence::AA or Bio::Sequence::Generic, according to the sequence type.



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# File 'lib/bio/appl/gcg/seq.rb', line 88

def seq
  unless @seq then
    case @seq_type
    when 'N', 'n'
      k = Bio::Sequence::NA
    when 'P', 'p'
      k = Bio::Sequence::AA
    else
      k = Bio::Sequence
    end
    @seq = k.new(@data.tr('^-a-zA-Z.~', ''))
  end
  @seq
end