Class: Bio::MAF::DummyParser

Inherits:

Object

• Object
• Bio::MAF::DummyParser

Includes:

MAFParsing

Defined in:

lib/bio/maf/parser.rb

Overview

Exposes parser internals for unit tests.

Constant Summary

Constants included from MAFParsing

MAFParsing::BLOCK_START, MAFParsing::BLOCK_START_OR_EOS, MAFParsing::COMMENT, MAFParsing::E, MAFParsing::EOL_OR_EOF, MAFParsing::I, MAFParsing::JRUBY_P, MAFParsing::Q, MAFParsing::S, MAFParsing::STRAND_SYM

Method Summary

Methods included from MAFParsing

#_parse_block, #gather_leading_fragment, #parse_block_data, #parse_empty_line, #parse_error, #parse_maf_vars, #parse_seq_line, #parse_trailing_fragment, #seq_filter_ok?, #set_last_block_pos!, #trailing_nl?