Documentation for bio-gff3 (0.9.1)

Alphabetic Index

File Listing

README

Namespace Listing A-Z

B

Bio
BioRubyFileRecord (Bio::GFF::GFF3)
Block (Bio::GFFbrowser)

C

Counter (Bio::GFFbrowser::Helpers)

D

Digest (Bio::GFFbrowser)

F

FastLineParser (Bio::GFFbrowser)
FastLineRecord (Bio::GFFbrowser)
FastParserFileRecord (Bio::GFF::GFF3)
FastaReader (Bio::GFF)
FastaRecord (Bio::GFFbrowser)
FastaWriter (Bio::GFFbrowser)
FileIterator (Bio::GFF::GFF3)

G

GFF (Bio)
GFF3 (Bio::GFFbrowser)
GFF3 (Bio::GFF)
GFF3ParseFile (Bio::GFFbrowser)
GFFbrowser (Bio)
Gff3Component (Bio::GFFbrowser::Helpers)
Gff3Features (Bio::GFFbrowser::Helpers)
Gff3Sequence (Bio::GFFbrowser::Helpers)
GffBlockParser (Bio::GFFbrowser::Block)

H

Helpers (Bio::GFFbrowser)

I

InMemory (Bio::GFFbrowser::Digest)

L

LRUHash
LinkedRecs (Bio::GFFbrowser::Helpers)
Logger (Bio::GFFbrowser::Helpers)
LruCache (Bio::GFFbrowser::Digest)
LruCacheHelpers (Bio::GFFbrowser::Digest)
LruRec (Bio::GFFbrowser::Digest::LruCacheHelpers)
LruTracker (Bio::GFFbrowser::Digest)

N

NoCache (Bio::GFFbrowser::Digest)
NoCacheHelpers (Bio::GFFbrowser::Digest)
Node (LRUHash)

P

Parser (Bio::GFFbrowser::Digest)

R

Record (Bio::GFFbrowser)
Record (Bio::GFFbrowser::Helpers)

S

Section (Bio::GFFbrowser::Helpers)
Sections (Bio::GFFbrowser::Helpers)
SeekLinkedRecs (Bio::GFFbrowser::Digest::LruCacheHelpers)
SeekLinkedRecs (Bio::GFFbrowser::Digest::NoCacheHelpers)
SeekRec (Bio::GFFbrowser::Digest::NoCacheHelpers)
SeekRec (Bio::GFFbrowser::Digest::LruCacheHelpers)
SeekRecList (Bio::GFFbrowser::Digest::LruCacheHelpers)
SeekRecList (Bio::GFFbrowser::Digest::NoCacheHelpers)

V

Validate (Bio::GFFbrowser::Helpers)