Documentation for wrnap (1.2.2)

Alphabetic Index

File Listing

README

Namespace Listing A-Z

Top Level Namespace

A

Array

B

Base (Wrnap::Package)
Box (Wrnap::Rna)

C

Chainer (Wrnap::Global)
ClassMethods (Wrnap::Global::Runner)
ClassMethods (Wrnap::Rna::Extensions)
ConstraintBox (Wrnap::Rna::Constraints)
ConstraintData (Wrnap::Rna::Constraints)
Constraints (Wrnap::Rna)
Container (Wrnap::Rna::Metadata)
Context (Wrnap::Rna)

E

EnergyGrid2d (Wrnap::Package)
EnergyGrid2dWrapper (Wrnap::Package::EnergyGrid2d)
Entrez (Wrnap::Global)
Etl (Wrnap)
Eval (Wrnap::Package)
Extensions (Wrnap::Rna)

F

FftEq (Wrnap::Package)
FftEqBase (Wrnap::Package)
FftMfpt (Wrnap::Package)
FftPopulation (Wrnap::Package)
Fftbor (Wrnap::Package)
Fftbor2d (Wrnap::Package)
Ffthairpin (Wrnap::Package)
Fftmultiloop (Wrnap::Package)
Fold (Wrnap::Package)
FoldConstrained (Wrnap::Package)

G

Global (Wrnap)
Graphing (Wrnap)

H

Heat (Wrnap::Package)
Helix (Wrnap::Rna)

I

Infernal (Wrnap::Etl)
InstanceMethods (Wrnap::Rna::Constraints)
InstanceMethods (Wrnap::Global::Runner)
InstanceMethods (Wrnap::Rna::Metadata)
InstanceMethods (Wrnap::Global::Chainer)
InstanceMethods (Wrnap::Rna::Extensions)

K

Kinwalker (Wrnap::Package)

L

Loop (Wrnap::Rna)

M

Metadata (Wrnap::Rna)
Mfpt (Wrnap::Package)

N

Node (Wrnap::Package::Kinwalker)

O

OneStructureBasedMethods (Wrnap::Rna::Extensions)

P

Package (Wrnap)
Parser (Wrnap::Global)
Path (Wrnap::Package::TabuPath)
Plot (Wrnap::Package)
PopulationProportion (Wrnap::Package::FftPopulation)

R

R (Wrnap::Graphing)
RNA
Rna (Wrnap)
Rna2dfold (Wrnap::Package)
Rnabor (Wrnap::Package)
Row2d (Wrnap::Package::EnergyGrid2d)
Runner (Wrnap::Global)

S

Spectral (Wrnap::Package)
Stockholm (Wrnap::Etl)
Subopt (Wrnap::Package)

T

TabuPath (Wrnap::Package)
TreeFunctions (Wrnap::Rna)
TreePlanter (Wrnap::Rna)
TreeStem (Wrnap::Rna)
TwoStructureBasedMethods (Wrnap::Rna::Extensions)

V

Varna (Wrnap::Package)

W

Wrnap
Wrnapper (Wrnap::Rna)

X

Xbor (Wrnap::Package)

Y

Yaml (Wrnap::Global)