Documentation for sequenceserver (3.1.3)

Alphabetic Index

Namespace Listing A-Z

B

BLAST (SequenceServer)
BLAST_DATABASE_ERROR (SequenceServer)
BLAST_NOT_COMPATIBLE (SequenceServer)
BLAST_NOT_INSTALLED_OR_NOT_EXECUTABLE (SequenceServer)

C

CONFIG_FILE_ERROR (SequenceServer)
CommandFailed (SequenceServer)
Config (SequenceServer)

D

DATABASE_DIR_NOT_SET (SequenceServer)
Database (SequenceServer)
DatabaseUnreachableError (SequenceServer)
Doctor (SequenceServer)

E

ENOENT (SequenceServer)
Error (SequenceServer::BLAST)

F

Formatter (SequenceServer::BLAST)
Formatter (SequenceServer::Logger)

H

HSP (SequenceServer::BLAST)
Hash
Hit (SequenceServer::BLAST)

I

INCOMPATIBLE_BLAST_DATABASES (SequenceServer)
IO (SequenceServer::Sequence::Retriever)
InputError (SequenceServer)
InvalidParameterError (SequenceServer)
InvalidSequenceIdError (SequenceServer)

J

Job (SequenceServer::BLAST)
Job (SequenceServer)
JobRemover (SequenceServer)

L

Links (SequenceServer)
Logger (SequenceServer)

M

MAKEBLASTDB (SequenceServer)

N

NO_BLAST_DATABASE_FOUND (SequenceServer)
NUM_THREADS_INCORRECT (SequenceServer)
NotFound (SequenceServer)

P

Pool

Q

Query (SequenceServer::BLAST)

R

Report (SequenceServer)
Report (SequenceServer::BLAST)
Retriever (SequenceServer::Sequence)
Routes (SequenceServer)

S

Sequence (SequenceServer)
SequenceServer
Server (SequenceServer)
SystemError (SequenceServer)

T

Tasks (SequenceServer::BLAST)

Z

ZipFileGenerator